RNA–Protein interactions for RNA: YPR057W

BRR1, Transcript of snRNP protein component of spliceosomal snRNPs, yeastyeast

Gene BRR1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRR1YPR057W BBC1P47068 1157 aa11.01□□□□□ -0.65
BRR1YPR057W CWH41P53008 833 aa11.01□□□□□ -0.65
BRR1YPR057W SAS4Q04003 481 aa11.01□□□□□ -0.65
BRR1YPR057W CAF20P12962 161 aaKnown RBP11□□□□□ -0.65
BRR1YPR057W SPL2P38839 148 aa11□□□□□ -0.65
BRR1YPR057W SPO22P40511 975 aa11□□□□□ -0.65
BRR1YPR057W DJP1P40564 432 aa11□□□□□ -0.65
BRR1YPR057W KRI1P42846 591 aaKnown RBP11□□□□□ -0.65
BRR1YPR057W PKH3Q03306 898 aaPredicted RBP11□□□□□ -0.65
BRR1YPR057W KRE2P27809 442 aa10.99□□□□□ -0.65
BRR1YPR057W SNF7P39929 240 aaKnown RBP10.99□□□□□ -0.65
BRR1YPR057W YMR147WP40218 223 aaKnown RBP10.99□□□□□ -0.65
BRR1YPR057W NPA3P47122 385 aa10.99□□□□□ -0.65
BRR1YPR057W ERO1Q03103 563 aa10.99□□□□□ -0.65
BRR1YPR057W RPT4P53549 437 aaKnown RBP10.98□□□□□ -0.65
BRR1YPR057W VPS20Q04272 221 aa10.98□□□□□ -0.65
BRR1YPR057W LAM4P38800 1345 aa10.98□□□□□ -0.65
BRR1YPR057W ROX1P25042 368 aa10.97□□□□□ -0.65
BRR1YPR057W SMY1P32364 656 aaKnown RBP10.97□□□□□ -0.65
BRR1YPR057W NPL4P33755 580 aa10.97□□□□□ -0.65
BRR1YPR057W PRY3P47033 881 aa10.97□□□□□ -0.65
BRR1YPR057W KAR5Q04746 504 aa10.97□□□□□ -0.65
BRR1YPR057W TAH18Q12181 623 aa10.97□□□□□ -0.65
BRR1YPR057W MSP1P28737 362 aa10.96□□□□□ -0.65
BRR1YPR057W ERT1P38140 529 aa10.96□□□□□ -0.65
BRR1YPR057W ENP2P48234 707 aaKnown RBP10.96□□□□□ -0.65
BRR1YPR057W INM2Q05533 292 aa10.96□□□□□ -0.65
BRR1YPR057W CYB2P00175 591 aa10.95□□□□□ -0.66
BRR1YPR057W LCB1P25045 558 aaKnown RBP10.95□□□□□ -0.66
BRR1YPR057W MET1P36150 593 aa10.95□□□□□ -0.66
BRR1YPR057W CIC1P38779 376 aaKnown RBP10.95□□□□□ -0.66
BRR1YPR057W YIR042CP40586 236 aa10.95□□□□□ -0.66
BRR1YPR057W MSN5P52918 1224 aa10.95□□□□□ -0.66
BRR1YPR057W IRC4Q03036 179 aa10.95□□□□□ -0.66
BRR1YPR057W UBX2Q04228 584 aa10.95□□□□□ -0.66
BRR1YPR057W CLC1P17891 233 aa10.94□□□□□ -0.66
BRR1YPR057W GEF1P37020 779 aa10.94□□□□□ -0.66
BRR1YPR057W GRX7P38068 203 aa10.94□□□□□ -0.66
BRR1YPR057W IRC8P47046 822 aa10.94□□□□□ -0.66
BRR1YPR057W SSF2Q12153 453 aaPredicted RBP10.94□□□□□ -0.66
BRR1YPR057W SKI2P35207 1287 aaKnown RBP RIP-Chip data10.93□□□□□ -0.66not detected
BRR1YPR057W YKL222CP35995 705 aa10.93□□□□□ -0.66
BRR1YPR057W BDH2P39713 417 aa10.93□□□□□ -0.66
BRR1YPR057W IOC3P43596 787 aa10.93□□□□□ -0.66
BRR1YPR057W PSF3Q12146 194 aa10.93□□□□□ -0.66
BRR1YPR057W PGA3Q12746 312 aaKnown RBP10.93□□□□□ -0.66
BRR1YPR057W RPL19AP0CX82 189 aaKnown RBP10.92□□□□□ -0.66
BRR1YPR057W RPL19BP0CX83 189 aaPredicted RBP10.92□□□□□ -0.66
BRR1YPR057W BIK1P11709 440 aa10.92□□□□□ -0.66
BRR1YPR057W HRQ1Q05549 1077 aa10.92□□□□□ -0.66
BRR1YPR057W DUR1,2P32528 1835 aaKnown RBP10.91□□□□□ -0.66
BRR1YPR057W PEP3P27801 918 aa10.91□□□□□ -0.66
BRR1YPR057W YFH7P43591 353 aa10.91□□□□□ -0.66
BRR1YPR057W HAP5Q02516 242 aa10.91□□□□□ -0.66
BRR1YPR057W PPM2Q08282 695 aa10.91□□□□□ -0.66
BRR1YPR057W RET1P22276 1149 aaKnown RBP10.9□□□□□ -0.66
BRR1YPR057W IMP2'P32351 346 aa10.9□□□□□ -0.66
BRR1YPR057W RPT3P33298 428 aaKnown RBP10.9□□□□□ -0.66
BRR1YPR057W PTK1P36002 662 aaPredicted RBP10.9□□□□□ -0.66
BRR1YPR057W BOI1P38041 980 aaKnown RBP10.9□□□□□ -0.66
BRR1YPR057W HST1P53685 503 aa10.9□□□□□ -0.66
BRR1YPR057W TSR3Q12094 313 aaKnown RBP10.9□□□□□ -0.66
BRR1YPR057W GRX6Q12438 231 aa10.9□□□□□ -0.66
BRR1YPR057W COQ1P18900 473 aa10.89□□□□□ -0.67
BRR1YPR057W CRG1P38892 291 aaRIP-Chip data10.89□□□□□ -0.67 RIP-Chip
BRR1YPR057W VID28P40547 921 aa10.89□□□□□ -0.67
BRR1YPR057W EAF6P47128 113 aa10.89□□□□□ -0.67
BRR1YPR057W ARP5P53946 755 aa10.89□□□□□ -0.67
BRR1YPR057W FIG2P25653 1609 aa10.88□□□□□ -0.67
BRR1YPR057W CTT1P06115 562 aa10.88□□□□□ -0.67
BRR1YPR057W FBP26P32604 452 aa10.88□□□□□ -0.67
BRR1YPR057W HYR1P40581 163 aaKnown RBP10.88□□□□□ -0.67
BRR1YPR057W JJJ2P46997 583 aa10.88□□□□□ -0.67
BRR1YPR057W CTF18P49956 741 aa10.88□□□□□ -0.67
BRR1YPR057W ECM23Q02710 187 aa10.88□□□□□ -0.67
BRR1YPR057W COG8Q04632 607 aa10.88□□□□□ -0.67
BRR1YPR057W ESF1Q06344 628 aaKnown RBP10.88□□□□□ -0.67
BRR1YPR057W SPN1Q06505 410 aaPredicted RBP10.88□□□□□ -0.67
BRR1YPR057W PSK2Q08217 1101 aa10.88□□□□□ -0.67
BRR1YPR057W PMD1P32634 1753 aa10.88□□□□□ -0.67
BRR1YPR057W MATALPHA2P0CY08 210 aa10.87□□□□□ -0.67
BRR1YPR057W HMLALPHA2P0CY09 210 aa10.87□□□□□ -0.67
BRR1YPR057W TTI1P36097 1038 aa10.87□□□□□ -0.67
BRR1YPR057W ARL1P38116 183 aaKnown RBP10.87□□□□□ -0.67
BRR1YPR057W SET4P42948 560 aa10.87□□□□□ -0.67
BRR1YPR057W YGL081WP53156 320 aa10.87□□□□□ -0.67
BRR1YPR057W TOS4Q06266 489 aa10.87□□□□□ -0.67
BRR1YPR057W WRS1Q12109 432 aaKnown RBP10.87□□□□□ -0.67
BRR1YPR057W SNF3P10870 884 aa10.86□□□□□ -0.67
BRR1YPR057W YHL017WP38745 532 aa10.86□□□□□ -0.67
BRR1YPR057W RRP8P38961 392 aaKnown RBP10.86□□□□□ -0.67
BRR1YPR057W YKE2P52553 114 aa10.86□□□□□ -0.67
BRR1YPR057W KIN4Q01919 800 aa10.86□□□□□ -0.67
BRR1YPR057W MDL2P33311 773 aa10.85□□□□□ -0.67
BRR1YPR057W PRX1P34227 261 aaKnown RBP10.85□□□□□ -0.67
BRR1YPR057W RER2P35196 286 aa10.85□□□□□ -0.67
BRR1YPR057W ELG1Q12050 791 aa10.85□□□□□ -0.67
BRR1YPR057W YPL150WQ12152 901 aa10.85□□□□□ -0.67
BRR1YPR057W CHO2P05374 869 aaKnown RBP10.84□□□□□ -0.67
BRR1YPR057W YKU70P32807 602 aa10.84□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms