RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W Q0182Q9ZZW1 134 aa6.21□□□□□ -1.42
HSH49YOR319W PRY1P47032 299 aa6.2□□□□□ -1.42
HSH49YOR319W SSA4P22202 642 aaKnown RBP6.19□□□□□ -1.42
HSH49YOR319W NGR1P32831 672 aaKnown RBP6.19□□□□□ -1.42
HSH49YOR319W UBX7P38349 436 aa6.19□□□□□ -1.42
HSH49YOR319W CWH41P53008 833 aa6.18□□□□□ -1.42
HSH49YOR319W TRS33Q99394 268 aa6.18□□□□□ -1.42
HSH49YOR319W PUP1P25043 261 aa6.17□□□□□ -1.42
HSH49YOR319W SCD5P34758 872 aa6.17□□□□□ -1.42
HSH49YOR319W HEH2Q03281 663 aa6.17□□□□□ -1.42
HSH49YOR319W TPS3P38426 1054 aaKnown RBP6.16□□□□□ -1.42
HSH49YOR319W MTO1P53070 669 aa6.16□□□□□ -1.42
HSH49YOR319W UTP4Q06679 776 aaKnown RBP6.16□□□□□ -1.42
HSH49YOR319W NHA1Q99271 985 aa6.16□□□□□ -1.42
HSH49YOR319W PGM2P37012 569 aaKnown RBP6.15□□□□□ -1.42
HSH49YOR319W ALG14P38242 237 aa6.15□□□□□ -1.42
HSH49YOR319W YPL034WQ03083 165 aa6.15□□□□□ -1.42
HSH49YOR319W SSA1P10591 642 aaKnown RBP6.14□□□□□ -1.43
HSH49YOR319W MAC1P35192 417 aa6.14□□□□□ -1.43
HSH49YOR319W HXT5P38695 592 aa6.14□□□□□ -1.43
HSH49YOR319W NCL1P38205 684 aaKnown RBP6.13□□□□□ -1.43
HSH49YOR319W PRK1P40494 810 aa6.13□□□□□ -1.43
HSH49YOR319W PUF6Q04373 656 aaKnown RBP6.12□□□□□ -1.43
HSH49YOR319W KAP122P32767 1081 aa6.11□□□□□ -1.43
HSH49YOR319W GEF1P37020 779 aa6.11□□□□□ -1.43
HSH49YOR319W SKP1P52286 194 aa6.11□□□□□ -1.43
HSH49YOR319W SUB2Q07478 446 aaKnown RBP6.11□□□□□ -1.43
HSH49YOR319W SUV3P32580 737 aa6.1□□□□□ -1.43
HSH49YOR319W BUD9P53226 547 aa6.1□□□□□ -1.43
HSH49YOR319W NOB1Q08444 459 aaKnown RBP6.1□□□□□ -1.43
HSH49YOR319W ALO1P54783 526 aaKnown RBP6.09□□□□□ -1.43
HSH49YOR319W CUS1Q02554 436 aaPredicted RBP6.09□□□□□ -1.43
HSH49YOR319W YML083CQ04526 418 aa6.09□□□□□ -1.43
HSH49YOR319W PUN1Q06991 263 aa6.09□□□□□ -1.43
HSH49YOR319W NAR1P23503 491 aaKnown RBP6.08□□□□□ -1.44
HSH49YOR319W ALD4P46367 519 aaKnown RBP6.08□□□□□ -1.44
HSH49YOR319W FOX2Q02207 900 aaKnown RBP6.08□□□□□ -1.44
HSH49YOR319W GIS4Q04233 774 aa6.08□□□□□ -1.44
HSH49YOR319W CAB1Q04430 367 aa6.08□□□□□ -1.44
HSH49YOR319W NAB2P32505 525 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
HSH49YOR319W QDR2P40474 542 aa6.07□□□□□ -1.44
HSH49YOR319W YML020WQ03722 664 aa6.07□□□□□ -1.44
HSH49YOR319W SRS2P12954 1174 aa6.06□□□□□ -1.44
HSH49YOR319W YBR197CP38306 217 aa6.06□□□□□ -1.44
HSH49YOR319W APM2P38700 605 aa6.06□□□□□ -1.44
HSH49YOR319W NOP8Q08287 484 aaPredicted RBP6.06□□□□□ -1.44
HSH49YOR319W MRPL33P20084 86 aa6.05□□□□□ -1.44
HSH49YOR319W OMA1P36163 345 aa6.05□□□□□ -1.44
HSH49YOR319W AI3P03877 415 aa6.04□□□□□ -1.44
HSH49YOR319W RPC31P17890 251 aa6.04□□□□□ -1.44
HSH49YOR319W VMA3P25515 160 aa6.04□□□□□ -1.44
HSH49YOR319W YNR040WP53736 256 aa6.04□□□□□ -1.44
HSH49YOR319W CWC15Q03772 175 aaKnown RBP6.04□□□□□ -1.44
HSH49YOR319W ISC10P32645 267 aa6.03□□□□□ -1.44
HSH49YOR319W RRM3P38766 723 aa6.03□□□□□ -1.44
HSH49YOR319W DYS1P38791 387 aa6.03□□□□□ -1.44
HSH49YOR319W GAS5Q08193 484 aa6.03□□□□□ -1.44
HSH49YOR319W SAC7P17121 654 aa6.02□□□□□ -1.45
HSH49YOR319W LDH1P38139 375 aa6.02□□□□□ -1.45
HSH49YOR319W INP52P50942 1183 aa6.01□□□□□ -1.45
HSH49YOR319W RRN6P32786 894 aa6□□□□□ -1.45
HSH49YOR319W PNP1Q05788 311 aa6□□□□□ -1.45
HSH49YOR319W YOR296WQ08748 1289 aa6□□□□□ -1.45
HSH49YOR319W PGM1P33401 570 aaKnown RBP5.99□□□□□ -1.45
HSH49YOR319W ARI1P53111 347 aaKnown RBP5.99□□□□□ -1.45
HSH49YOR319W IDI1P15496 288 aa5.98□□□□□ -1.45
HSH49YOR319W SFA1P32771 386 aa5.98□□□□□ -1.45
HSH49YOR319W GIP1P38229 639 aa5.98□□□□□ -1.45
HSH49YOR319W MRP10O75012 95 aa5.97□□□□□ -1.45
HSH49YOR319W COQ2P32378 372 aa5.97□□□□□ -1.45
HSH49YOR319W ISW1P38144 1129 aa5.97□□□□□ -1.45
HSH49YOR319W ITC1P53125 1264 aa5.97□□□□□ -1.45
HSH49YOR319W RPL34AP87262 121 aaPredicted RBP5.97□□□□□ -1.45
HSH49YOR319W SLP1Q12232 587 aa5.97□□□□□ -1.45
HSH49YOR319W YBR287WP38355 427 aa5.96□□□□□ -1.46
HSH49YOR319W BSD2P38356 321 aa5.96□□□□□ -1.46
HSH49YOR319W FUR4P05316 633 aaKnown RBP5.95□□□□□ -1.46
HSH49YOR319W FIR1P40020 876 aa5.95□□□□□ -1.46
HSH49YOR319W YER156CP40093 338 aaKnown RBP5.95□□□□□ -1.46
HSH49YOR319W IRC24P40580 263 aa5.95□□□□□ -1.46
HSH49YOR319W MSN1P22148 382 aa5.94□□□□□ -1.46
HSH49YOR319W HXT8P40886 569 aa5.94□□□□□ -1.46
HSH49YOR319W RSC6P25632 483 aa5.93□□□□□ -1.46
HSH49YOR319W KAE1P36132 386 aa5.93□□□□□ -1.46
HSH49YOR319W MED7Q08278 222 aa5.93□□□□□ -1.46
HSH49YOR319W CDC3P32457 520 aaKnown RBP5.92□□□□□ -1.46
HSH49YOR319W SUT1P53032 299 aaKnown RBP5.92□□□□□ -1.46
HSH49YOR319W RSC2Q06488 889 aa5.92□□□□□ -1.46
HSH49YOR319W LSO1Q3E827 93 aa5.92□□□□□ -1.46
HSH49YOR319W SLD2P34252 453 aa5.91□□□□□ -1.46
HSH49YOR319W BOI1P38041 980 aaKnown RBP5.91□□□□□ -1.46
HSH49YOR319W YIL165CP40446 119 aa5.91□□□□□ -1.46
HSH49YOR319W TED1P40533 473 aa5.91□□□□□ -1.46
HSH49YOR319W APC11Q12157 165 aa5.91□□□□□ -1.46
HSH49YOR319W YLR122CQ12312 125 aa5.91□□□□□ -1.46
HSH49YOR319W TY4B-PA0A0B7P3V8 1104 aa5.9□□□□□ -1.46
HSH49YOR319W TRP3P00937 484 aa5.9□□□□□ -1.46
HSH49YOR319W YKR073CP36153 106 aa5.9□□□□□ -1.46
HSH49YOR319W GIP2P40036 548 aa5.9□□□□□ -1.46
HSH49YOR319W TY4A-HQ6Q5P6 413 aa5.9□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms