RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF120YNL278W MAG2Q06436 670 aaKnown RBP3.32□□□□□ -1.88
CAF120YNL278W THI22Q06490 572 aa3.32□□□□□ -1.88
CAF120YNL278W PDR1P12383 1068 aa3.31□□□□□ -1.88
CAF120YNL278W BDH2P39713 417 aa3.31□□□□□ -1.88
CAF120YNL278W CST6P40535 587 aa3.31□□□□□ -1.88
CAF120YNL278W MPP10P47083 593 aaKnown RBP3.31□□□□□ -1.88
CAF120YNL278W UBX5Q06682 500 aa3.31□□□□□ -1.88
CAF120YNL278W MAK21Q12176 1025 aaKnown RBP3.31□□□□□ -1.88
CAF120YNL278W NTH2P35172 780 aa3.31□□□□□ -1.88
CAF120YNL278W OSH3P38713 996 aaKnown RBP3.31□□□□□ -1.88
CAF120YNL278W ADR1P07248 1323 aa3.31□□□□□ -1.88
CAF120YNL278W NOT3P06102 836 aaKnown RBP3.3□□□□□ -1.88
CAF120YNL278W KIP3P53086 805 aaKnown RBP3.3□□□□□ -1.88
CAF120YNL278W TLG1Q03322 224 aa3.3□□□□□ -1.88
CAF120YNL278W PLP2Q12017 286 aa3.3□□□□□ -1.88
CAF120YNL278W RVB2Q12464 471 aaKnown RBP3.3□□□□□ -1.88
CAF120YNL278W TIF1P10081 395 aaKnown RBP3.3□□□□□ -1.88
CAF120YNL278W MCM3P24279 971 aaKnown RBP3.3□□□□□ -1.88
CAF120YNL278W KIN4Q01919 800 aa3.3□□□□□ -1.88
CAF120YNL278W HSP82P02829 709 aaKnown RBP3.3□□□□□ -1.88
CAF120YNL278W YKR075CP36155 307 aa3.3□□□□□ -1.88
CAF120YNL278W TPS3P38426 1054 aaKnown RBP3.3□□□□□ -1.88
CAF120YNL278W SNF7P39929 240 aaKnown RBP3.3□□□□□ -1.88
CAF120YNL278W ENV11P53246 860 aa3.3□□□□□ -1.88
CAF120YNL278W HEM3P28789 327 aa3.29□□□□□ -1.88
CAF120YNL278W PPH3P32345 308 aa3.29□□□□□ -1.88
CAF120YNL278W NAB3P38996 802 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
CAF120YNL278W RRT14P40470 206 aa3.29□□□□□ -1.88
CAF120YNL278W WSC3Q12215 556 aa3.29□□□□□ -1.88
CAF120YNL278W TAF13P11747 167 aa3.29□□□□□ -1.88
CAF120YNL278W RET1P22276 1149 aaKnown RBP3.29□□□□□ -1.88
CAF120YNL278W PUP1P25043 261 aa3.29□□□□□ -1.88
CAF120YNL278W TTI1P36097 1038 aa3.29□□□□□ -1.88
CAF120YNL278W PMC1P38929 1173 aaPredicted RBP3.29□□□□□ -1.88
CAF120YNL278W AIM21P40563 679 aa3.29□□□□□ -1.88
CAF120YNL278W YJL007CP47080 104 aa3.29□□□□□ -1.88
CAF120YNL278W NST1P53935 1240 aa3.29□□□□□ -1.88
CAF120YNL278W SVL3Q03088 825 aaKnown RBP3.29□□□□□ -1.88
CAF120YNL278W YOL057WQ08225 711 aa3.29□□□□□ -1.88
CAF120YNL278W YAF9P53930 226 aa3.28□□□□□ -1.88
CAF120YNL278W TAF8Q03750 510 aa3.28□□□□□ -1.88
CAF120YNL278W STB3Q12427 513 aa3.28□□□□□ -1.88
CAF120YNL278W MAK11P20484 414 aaKnown RBP3.28□□□□□ -1.88
CAF120YNL278W SHC1P39000 512 aa3.28□□□□□ -1.88
CAF120YNL278W SPO22P40511 975 aa3.28□□□□□ -1.88
CAF120YNL278W DSD1P53095 428 aa3.28□□□□□ -1.88
CAF120YNL278W SLM3Q12093 417 aa3.28□□□□□ -1.88
CAF120YNL278W TRK1P12685 1235 aa3.28□□□□□ -1.88
CAF120YNL278W RTG3P38165 486 aa3.28□□□□□ -1.88
CAF120YNL278W ZDS1P50111 915 aaKnown RBP3.28□□□□□ -1.88
CAF120YNL278W EAF6P47128 113 aa3.27□□□□□ -1.89
CAF120YNL278W GYP7P48365 746 aa3.27□□□□□ -1.89
CAF120YNL278W BIO2P32451 375 aa3.27□□□□□ -1.89
CAF120YNL278W TAF5P38129 798 aa3.27□□□□□ -1.89
CAF120YNL278W YHR131CP38835 850 aa3.27□□□□□ -1.89
CAF120YNL278W TY4A-JP47023 414 aa3.27□□□□□ -1.89
CAF120YNL278W MOT1P32333 1867 aa3.27□□□□□ -1.89
CAF120YNL278W TUS1Q06412 1307 aa3.27□□□□□ -1.89
CAF120YNL278W KEX1P09620 729 aa3.26□□□□□ -1.89
CAF120YNL278W YDR090CQ03193 310 aa3.26□□□□□ -1.89
CAF120YNL278W PHM7Q12252 991 aa3.26□□□□□ -1.89
CAF120YNL278W WHI5Q12416 295 aa3.26□□□□□ -1.89
CAF120YNL278W FLO11P08640 1367 aa3.26□□□□□ -1.89
CAF120YNL278W COX6P00427 148 aa3.26□□□□□ -1.89
CAF120YNL278W TRL1P09880 827 aaKnown RBP3.26□□□□□ -1.89
CAF120YNL278W RPL40AP0CH08 128 aaKnown RBP3.26□□□□□ -1.89
CAF120YNL278W RPL40BP0CH09 128 aaKnown RBP3.26□□□□□ -1.89
CAF120YNL278W RAD4P14736 754 aa3.26□□□□□ -1.89
CAF120YNL278W OPI1P21957 404 aa3.26□□□□□ -1.89
CAF120YNL278W IOC3P43596 787 aa3.26□□□□□ -1.89
CAF120YNL278W ATG20Q07528 640 aa3.26□□□□□ -1.89
CAF120YNL278W TUM1Q08686 304 aaKnown RBP3.26□□□□□ -1.89
CAF120YNL278W YPL150WQ12152 901 aa3.26□□□□□ -1.89
CAF120YNL278W SPT2P06843 333 aaPredicted RBP3.26□□□□□ -1.89
CAF120YNL278W MSC7P38694 644 aa3.26□□□□□ -1.89
CAF120YNL278W HAT1Q12341 374 aa3.26□□□□□ -1.89
CAF120YNL278W STE11P23561 717 aa3.25□□□□□ -1.89
CAF120YNL278W RKM3P38222 552 aa3.25□□□□□ -1.89
CAF120YNL278W RPT2P40327 437 aaKnown RBP3.25□□□□□ -1.89
CAF120YNL278W KCC4P25389 1037 aa3.25□□□□□ -1.89
CAF120YNL278W CDC3P32457 520 aaKnown RBP3.25□□□□□ -1.89
CAF120YNL278W YJL171CP46992 396 aa3.25□□□□□ -1.89
CAF120YNL278W RNH70P53331 553 aa3.25□□□□□ -1.89
CAF120YNL278W CTR9P89105 1077 aa3.25□□□□□ -1.89
CAF120YNL278W BRE1Q07457 700 aaKnown RBP3.25□□□□□ -1.89
CAF120YNL278W SWI1P09547 1314 aa3.25□□□□□ -1.89
CAF120YNL278W EDS1P38073 919 aa3.24□□□□□ -1.89
CAF120YNL278W FIR1P40020 876 aa3.24□□□□□ -1.89
CAF120YNL278W BUD6P41697 788 aa3.24□□□□□ -1.89
CAF120YNL278W MSN5P52918 1224 aa3.24□□□□□ -1.89
CAF120YNL278W INP54Q08227 384 aaKnown RBP3.24□□□□□ -1.89
CAF120YNL278W NUM1Q00402 2748 aa3.24□□□□□ -1.89
CAF120YNL278W CIT2P08679 460 aa3.24□□□□□ -1.89
CAF120YNL278W VPS8P39702 1274 aa3.24□□□□□ -1.89
CAF120YNL278W BUG1Q12191 341 aa3.24□□□□□ -1.89
CAF120YNL278W GAL11P19659 1081 aa3.24□□□□□ -1.89
CAF120YNL278W COQ8P27697 501 aa3.24□□□□□ -1.89
CAF120YNL278W TOM20P35180 183 aa3.24□□□□□ -1.89
CAF120YNL278W ART5P53244 586 aaKnown RBP3.24□□□□□ -1.89
CAF120YNL278W DAP1Q12091 152 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 71.5 ms