RNA–Protein interactions for RNA: YNL258C

DSL1, Transcript of Peripheral membrane protein needed for Golgi-to-ER retrograde traffic, yeast

Gene DSL1, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DSL1	YNL258C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
DSL1	YNL258C	MAD1	P40957	749 aa		5.14	□□□□□ -1.59
DSL1	YNL258C	TFG1	P41895	735 aa	Predicted RBP	5.14	□□□□□ -1.59
DSL1	YNL258C	CLN2	P20438	545 aa		5.13	□□□□□ -1.59
DSL1	YNL258C	YBL086C	P38177	466 aa		5.13	□□□□□ -1.59
DSL1	YNL258C	YGR053C	P53234	283 aa		5.13	□□□□□ -1.59
DSL1	YNL258C	YKL091C	P33324	310 aa	Known RBP	5.13	□□□□□ -1.59
DSL1	YNL258C	HXT8	P40886	569 aa		5.13	□□□□□ -1.59
DSL1	YNL258C	CTR9	P89105	1077 aa		5.13	□□□□□ -1.59
DSL1	YNL258C	BSC2	Q05611	235 aa		5.13	□□□□□ -1.59
DSL1	YNL258C	PUS5	Q06244	254 aa		5.13	□□□□□ -1.59
DSL1	YNL258C	WTM2	Q12206	467 aa		5.13	□□□□□ -1.59
DSL1	YNL258C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	not detected
DSL1	YNL258C	SCD5	P34758	872 aa		5.12	□□□□□ -1.59
DSL1	YNL258C	YHR020W	P38708	688 aa	Known RBP	5.12	□□□□□ -1.59
DSL1	YNL258C	SAM37	P50110	327 aa		5.12	□□□□□ -1.59
DSL1	YNL258C	COB	P00163	385 aa		5.12	□□□□□ -1.59
DSL1	YNL258C	PET112	P33893	541 aa		5.12	□□□□□ -1.59
DSL1	YNL258C	BDP1	P46678	594 aa		5.12	□□□□□ -1.59
DSL1	YNL258C	UTP4	Q06679	776 aa	Known RBP	5.12	□□□□□ -1.59
DSL1	YNL258C	TOP1	P04786	769 aa		5.11	□□□□□ -1.59
DSL1	YNL258C	GRX1	P25373	110 aa	Known RBP	5.11	□□□□□ -1.59
DSL1	YNL258C	UGA4	P32837	571 aa		5.11	□□□□□ -1.59
DSL1	YNL258C	NTA1	P40354	457 aa		5.11	□□□□□ -1.59
DSL1	YNL258C	SUM1	P46676	1062 aa		5.11	□□□□□ -1.59
DSL1	YNL258C	FAA4	P47912	694 aa	Known RBP	5.11	□□□□□ -1.59
DSL1	YNL258C	NOC3	Q07896	663 aa	Predicted RBP	5.11	□□□□□ -1.59
DSL1	YNL258C	CDC34	P14682	295 aa		5.11	□□□□□ -1.59
DSL1	YNL258C	PRE9	P23638	258 aa	Known RBP	5.11	□□□□□ -1.59
DSL1	YNL258C	AIR2	Q12476	344 aa	Known RBP	5.11	□□□□□ -1.59
DSL1	YNL258C	TIF6	Q12522	245 aa	Known RBP	5.11	□□□□□ -1.59
DSL1	YNL258C	MSN1	P22148	382 aa		5.1	□□□□□ -1.59
DSL1	YNL258C	KIP2	P28743	706 aa		5.1	□□□□□ -1.59
DSL1	YNL258C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.1	□□□□□ -1.59	not detected
DSL1	YNL258C	PPG1	P32838	368 aa		5.1	□□□□□ -1.59
DSL1	YNL258C	SMC1	P32908	1225 aa		5.1	□□□□□ -1.59
DSL1	YNL258C	MKS1	P34072	584 aa		5.1	□□□□□ -1.59
DSL1	YNL258C	YKL069W	P36088	180 aa		5.1	□□□□□ -1.59
DSL1	YNL258C	FPR3	P38911	411 aa	Known RBP	5.1	□□□□□ -1.59
DSL1	YNL258C	SYH1	Q02875	849 aa	Known RBP	5.1	□□□□□ -1.59
DSL1	YNL258C	SAS4	Q04003	481 aa		5.1	□□□□□ -1.59
DSL1	YNL258C	UBX5	Q06682	500 aa		5.1	□□□□□ -1.59
DSL1	YNL258C	WRS1	Q12109	432 aa	Known RBP	5.1	□□□□□ -1.59
DSL1	YNL258C	RPS31	P05759	152 aa	Known RBP	5.09	□□□□□ -1.59
DSL1	YNL258C	PEP7	P32609	515 aa		5.09	□□□□□ -1.59
DSL1	YNL258C	PIC2	P40035	300 aa		5.09	□□□□□ -1.59
DSL1	YNL258C	DUR3	P33413	735 aa		5.09	□□□□□ -1.59
DSL1	YNL258C	CIC1	P38779	376 aa	Known RBP	5.09	□□□□□ -1.59
DSL1	YNL258C	HUL5	P53119	910 aa		5.09	□□□□□ -1.59
DSL1	YNL258C	INP54	Q08227	384 aa	Known RBP	5.09	□□□□□ -1.59
DSL1	YNL258C	CDC53	Q12018	815 aa	Known RBP	5.09	□□□□□ -1.59
DSL1	YNL258C	PRE3	P38624	215 aa		5.08	□□□□□ -1.6
DSL1	YNL258C	GNP1	P48813	663 aa		5.08	□□□□□ -1.6
DSL1	YNL258C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
DSL1	YNL258C	YPL109C	Q02981	657 aa		5.08	□□□□□ -1.6
DSL1	YNL258C	FLP1	P03870	423 aa		5.08	□□□□□ -1.6
DSL1	YNL258C	RPC31	P17890	251 aa		5.08	□□□□□ -1.6
DSL1	YNL258C	GRX4	P32642	244 aa		5.08	□□□□□ -1.6
DSL1	YNL258C	UTP7	P40055	554 aa	Known RBP	5.08	□□□□□ -1.6
DSL1	YNL258C	DAT1	P13483	248 aa	Known RBP	5.07	□□□□□ -1.6
DSL1	YNL258C	MLF3	P32047	452 aa		5.07	□□□□□ -1.6
DSL1	YNL258C	PRP40	P33203	583 aa	Known RBP	5.07	□□□□□ -1.6
DSL1	YNL258C	SHM1	P37292	490 aa	Predicted RBP	5.07	□□□□□ -1.6
DSL1	YNL258C	RAD55	P38953	406 aa		5.07	□□□□□ -1.6
DSL1	YNL258C	SPF1	P39986	1215 aa	Known RBP	5.07	□□□□□ -1.6
DSL1	YNL258C	PSY2	P40164	858 aa		5.07	□□□□□ -1.6
DSL1	YNL258C	DAL4	Q04895	635 aa		5.07	□□□□□ -1.6
DSL1	YNL258C	DFG5	Q05031	458 aa		5.07	□□□□□ -1.6
DSL1	YNL258C	OXR1	Q08952	273 aa		5.07	□□□□□ -1.6
DSL1	YNL258C	SSN3	P39073	555 aa		5.07	□□□□□ -1.6
DSL1	YNL258C	GDE1	Q02979	1223 aa		5.07	□□□□□ -1.6
DSL1	YNL258C	YCS4	Q06156	1176 aa		5.07	□□□□□ -1.6
DSL1	YNL258C	Q0182	Q9ZZW1	134 aa		5.07	□□□□□ -1.6
DSL1	YNL258C	MCM5	P29496	775 aa	Known RBP	5.06	□□□□□ -1.6
DSL1	YNL258C	IRS4	P36115	615 aa	Known RBP	5.06	□□□□□ -1.6
DSL1	YNL258C	TBS1	P38114	1094 aa		5.06	□□□□□ -1.6
DSL1	YNL258C	QDR2	P40474	542 aa		5.06	□□□□□ -1.6
DSL1	YNL258C	OSW7	P43611	510 aa		5.06	□□□□□ -1.6
DSL1	YNL258C	YJR008W	P47085	338 aa		5.06	□□□□□ -1.6
DSL1	YNL258C	EEB1	Q02891	456 aa		5.06	□□□□□ -1.6
DSL1	YNL258C	FRK1	Q03002	865 aa	Predicted RBP	5.06	□□□□□ -1.6
DSL1	YNL258C	OPI10	Q08202	246 aa		5.06	□□□□□ -1.6
DSL1	YNL258C	MCD1	Q12158	566 aa		5.06	□□□□□ -1.6
DSL1	YNL258C	STE5	P32917	917 aa		5.06	□□□□□ -1.6
DSL1	YNL258C	GCR1	P07261	785 aa		5.05	□□□□□ -1.6
DSL1	YNL258C	LDH1	P38139	375 aa		5.05	□□□□□ -1.6
DSL1	YNL258C	YJR142W	P47173	342 aa		5.05	□□□□□ -1.6
DSL1	YNL258C	HEM13	P11353	328 aa	Known RBP	5.04	□□□□□ -1.6
DSL1	YNL258C	TIM23	P32897	222 aa		5.04	□□□□□ -1.6
DSL1	YNL258C	TOM20	P35180	183 aa		5.04	□□□□□ -1.6
DSL1	YNL258C	BSD2	P38356	321 aa		5.04	□□□□□ -1.6
DSL1	YNL258C	DYS1	P38791	387 aa		5.04	□□□□□ -1.6
DSL1	YNL258C	ULP1	Q02724	621 aa		5.04	□□□□□ -1.6
DSL1	YNL258C	MSH6	Q03834	1242 aa		5.04	□□□□□ -1.6
DSL1	YNL258C	TSR4	P25040	408 aa		5.04	□□□□□ -1.6
DSL1	YNL258C	NUP82	P40368	713 aa		5.04	□□□□□ -1.6
DSL1	YNL258C	MRPS18	P42847	217 aa		5.04	□□□□□ -1.6
DSL1	YNL258C	SAP155	P43612	1002 aa		5.04	□□□□□ -1.6
DSL1	YNL258C	EMG1	Q06287	252 aa	Known RBP	5.04	□□□□□ -1.6
DSL1	YNL258C	RAD4	P14736	754 aa		5.03	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 104.4 ms