RNA–Protein interactions for RNA: YMR110C

HFD1, Transcript of Hexadecenal dehydrogenase, yeast

Gene HFD1, Length 1,599 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HFD1	YMR110C	YNR014W	P53719	212 aa		5.76	□□□□□ -1.49
HFD1	YMR110C	NAF1	P53919	492 aa	Known RBP	5.76	□□□□□ -1.49
HFD1	YMR110C	WTM2	Q12206	467 aa		5.76	□□□□□ -1.49
HFD1	YMR110C	IQG1	Q12280	1495 aa		5.76	□□□□□ -1.49
HFD1	YMR110C	AHP1	P38013	176 aa	Known RBP	5.76	□□□□□ -1.49
HFD1	YMR110C	TRM3	Q07527	1436 aa		5.75	□□□□□ -1.49
HFD1	YMR110C	STH1	P32597	1359 aa		5.75	□□□□□ -1.49
HFD1	YMR110C	CHC1	P22137	1653 aa	Known RBP	5.75	□□□□□ -1.49
HFD1	YMR110C	PDR10	P51533	1564 aa		5.75	□□□□□ -1.49
HFD1	YMR110C	DAT1	P13483	248 aa	Known RBP	5.74	□□□□□ -1.49
HFD1	YMR110C	MCX1	P38323	520 aa	Predicted RBP	5.74	□□□□□ -1.49
HFD1	YMR110C	TY1A-DR3	Q12441	440 aa		5.74	□□□□□ -1.49
HFD1	YMR110C	ARO1	P08566	1588 aa	Known RBP	5.73	□□□□□ -1.49
HFD1	YMR110C	PDR15	Q04182	1529 aa	Known RBP	5.73	□□□□□ -1.49
HFD1	YMR110C	SSA2	P10592	639 aa	Known RBP	5.72	□□□□□ -1.49
HFD1	YMR110C	NUP157	P40064	1391 aa	Known RBP	5.72	□□□□□ -1.49
HFD1	YMR110C	UTR2	P32623	467 aa		5.72	□□□□□ -1.49
HFD1	YMR110C	SPT2	P06843	333 aa	Predicted RBP	5.71	□□□□□ -1.5
HFD1	YMR110C	ISR1	Q06098	443 aa	Known RBP	5.71	□□□□□ -1.5
HFD1	YMR110C	BUD3	P25558	1636 aa		5.7	□□□□□ -1.5
HFD1	YMR110C	DNF3	Q12674	1656 aa		5.69	□□□□□ -1.5
HFD1	YMR110C	GPM1	P00950	247 aa	Known RBP	5.69	□□□□□ -1.5
HFD1	YMR110C	FPS1	P23900	669 aa		5.69	□□□□□ -1.5
HFD1	YMR110C	TBS1	P38114	1094 aa		5.69	□□□□□ -1.5
HFD1	YMR110C	BOI2	P39969	1040 aa		5.69	□□□□□ -1.5
HFD1	YMR110C	MRX12	P47084	519 aa		5.69	□□□□□ -1.5
HFD1	YMR110C	YCK2	P23292	546 aa	Known RBP	5.68	□□□□□ -1.5
HFD1	YMR110C	ALA1	P40825	983 aa	Known RBP	5.68	□□□□□ -1.5
HFD1	YMR110C	UTP7	P40055	554 aa	Known RBP	5.67	□□□□□ -1.5
HFD1	YMR110C	MET1	P36150	593 aa		5.67	□□□□□ -1.5
HFD1	YMR110C	SEC7	P11075	2009 aa	Known RBP	5.66	□□□□□ -1.5
HFD1	YMR110C	EMP47	P43555	445 aa		5.66	□□□□□ -1.5
HFD1	YMR110C	YDR215C	Q12240	137 aa		5.66	□□□□□ -1.5
HFD1	YMR110C	YBT1	P32386	1661 aa		5.65	□□□□□ -1.5
HFD1	YMR110C	SUM1	P46676	1062 aa		5.65	□□□□□ -1.5
HFD1	YMR110C	JJJ2	P46997	583 aa		5.65	□□□□□ -1.5
HFD1	YMR110C	IRE1	P32361	1115 aa		5.64	□□□□□ -1.51
HFD1	YMR110C	AMN1	P38285	549 aa	Predicted RBP	5.64	□□□□□ -1.51
HFD1	YMR110C	SLN1	P39928	1220 aa	Predicted RBP	5.64	□□□□□ -1.51
HFD1	YMR110C	APL6	P46682	809 aa		5.64	□□□□□ -1.51
HFD1	YMR110C	ISF1	P32488	338 aa		5.63	□□□□□ -1.51
HFD1	YMR110C	LSB6	P42951	607 aa		5.63	□□□□□ -1.51
HFD1	YMR110C	CSE4	P36012	229 aa		5.63	□□□□□ -1.51
HFD1	YMR110C	MCM16	Q12262	181 aa		5.63	□□□□□ -1.51
HFD1	YMR110C	TY3B-G	Q99315	1547 aa		5.62	□□□□□ -1.51
HFD1	YMR110C	MRPL16	P38064	232 aa		5.62	□□□□□ -1.51
HFD1	YMR110C	TAT1	P38085	619 aa		5.62	□□□□□ -1.51
HFD1	YMR110C	MCA1	Q08601	432 aa		5.62	□□□□□ -1.51
HFD1	YMR110C	KNS1	P32350	737 aa	Predicted RBP	5.61	□□□□□ -1.51
HFD1	YMR110C	HAL5	P38970	855 aa	Known RBP	5.61	□□□□□ -1.51
HFD1	YMR110C	GLT1	Q12680	2145 aa	Known RBP	5.6	□□□□□ -1.51
HFD1	YMR110C	USO1	P25386	1790 aa		5.6	□□□□□ -1.51
HFD1	YMR110C	PDC5	P16467	563 aa	Known RBP	5.59	□□□□□ -1.51
HFD1	YMR110C	SPT5	P27692	1063 aa	Known RBP	5.59	□□□□□ -1.51
HFD1	YMR110C	SHM1	P37292	490 aa	Predicted RBP	5.59	□□□□□ -1.51
HFD1	YMR110C	STB3	Q12427	513 aa		5.59	□□□□□ -1.51
HFD1	YMR110C	MAC1	P35192	417 aa		5.59	□□□□□ -1.52
HFD1	YMR110C	SLX8	P40072	274 aa		5.59	□□□□□ -1.52
HFD1	YMR110C	PDC6	P26263	563 aa	Known RBP	5.58	□□□□□ -1.52
HFD1	YMR110C	PSH1	Q12161	406 aa		5.58	□□□□□ -1.52
HFD1	YMR110C	KIN1	P13185	1064 aa		5.57	□□□□□ -1.52
HFD1	YMR110C	ATG3	P40344	310 aa		5.57	□□□□□ -1.52
HFD1	YMR110C	CAT8	P39113	1433 aa		5.56	□□□□□ -1.52
HFD1	YMR110C	GEA1	P47102	1408 aa	Predicted RBP	5.56	□□□□□ -1.52
HFD1	YMR110C	YSP2	Q06681	1438 aa		5.56	□□□□□ -1.52
HFD1	YMR110C	HDA3	Q06623	655 aa		5.56	□□□□□ -1.52
HFD1	YMR110C	SOH1	P38633	127 aa		5.55	□□□□□ -1.52
HFD1	YMR110C	SPR3	P41901	512 aa		5.55	□□□□□ -1.52
HFD1	YMR110C	PRY1	P47032	299 aa		5.55	□□□□□ -1.52
HFD1	YMR110C	TY1A-DR2	Q03964	440 aa	Known RBP	5.55	□□□□□ -1.52
HFD1	YMR110C	UTP13	Q05946	817 aa	Known RBP	5.55	□□□□□ -1.52
HFD1	YMR110C	YDJ1	P25491	409 aa	Known RBP	5.53	□□□□□ -1.52
HFD1	YMR110C	YBL036C	P38197	257 aa		5.53	□□□□□ -1.52
HFD1	YMR110C	YAP3	P38749	330 aa		5.53	□□□□□ -1.52
HFD1	YMR110C	YPL034W	Q03083	165 aa		5.53	□□□□□ -1.52
HFD1	YMR110C	RPP1A	P05318	106 aa	Predicted RBP	5.52	□□□□□ -1.53
HFD1	YMR110C	RPS31	P05759	152 aa	Known RBP	5.51	□□□□□ -1.53
HFD1	YMR110C	HPC2	Q01448	625 aa		5.51	□□□□□ -1.53
HFD1	YMR110C	BNR1	P40450	1375 aa		5.51	□□□□□ -1.53
HFD1	YMR110C	YPP1	P46951	817 aa		5.5	□□□□□ -1.53
HFD1	YMR110C	ALO1	P54783	526 aa	Known RBP	5.5	□□□□□ -1.53
HFD1	YMR110C	TFB3	Q03290	321 aa		5.5	□□□□□ -1.53
HFD1	YMR110C	TAF7	Q05021	590 aa		5.5	□□□□□ -1.53
HFD1	YMR110C	IML1	P47170	1584 aa		5.49	□□□□□ -1.53
HFD1	YMR110C	LEU1	P07264	779 aa	Known RBP	5.49	□□□□□ -1.53
HFD1	YMR110C	GUA1	P38625	525 aa	Known RBP	5.49	□□□□□ -1.53
HFD1	YMR110C	MAK10	Q02197	733 aa		5.49	□□□□□ -1.53
HFD1	YMR110C	TPS3	P38426	1054 aa	Known RBP	5.48	□□□□□ -1.53
HFD1	YMR110C	YPQ2	Q06328	317 aa		5.48	□□□□□ -1.53
HFD1	YMR110C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.48	□□□□□ -1.53	not detected
HFD1	YMR110C	NUP188	P52593	1655 aa	Known RBP	5.48	□□□□□ -1.53
HFD1	YMR110C	OMA1	P36163	345 aa		5.47	□□□□□ -1.53
HFD1	YMR110C	MSC7	P38694	644 aa		5.47	□□□□□ -1.53
HFD1	YMR110C	IRC24	P40580	263 aa		5.47	□□□□□ -1.53
HFD1	YMR110C	SWI5	P08153	709 aa		5.46	□□□□□ -1.53
HFD1	YMR110C	YTA6	P40328	754 aa		5.46	□□□□□ -1.54
HFD1	YMR110C	NHA1	Q99271	985 aa		5.46	□□□□□ -1.54
HFD1	YMR110C	RGP1	P16664	663 aa		5.45	□□□□□ -1.54
HFD1	YMR110C	ALD2	P47771	506 aa		5.45	□□□□□ -1.54
HFD1	YMR110C	BRL1	P38770	471 aa		5.44	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 25 ms