RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C DPL1Q05567 589 aa8.14□□□□□ -1.11
AFG2YLR397C COG4Q06096 861 aa8.14□□□□□ -1.11
AFG2YLR397C MMR1Q06324 491 aa8.14□□□□□ -1.11
AFG2YLR397C MET7Q08645 548 aa8.14□□□□□ -1.11
AFG2YLR397C TRL1P09880 827 aaKnown RBP8.14□□□□□ -1.11
AFG2YLR397C SWC3P31376 625 aa8.14□□□□□ -1.11
AFG2YLR397C EFM2P38347 419 aa8.14□□□□□ -1.11
AFG2YLR397C HXT13P39924 564 aa8.14□□□□□ -1.11
AFG2YLR397C SAP155P43612 1002 aa8.14□□□□□ -1.11
AFG2YLR397C YNL247WP53852 767 aaKnown RBP8.14□□□□□ -1.11
AFG2YLR397C CUS1Q02554 436 aaPredicted RBP8.14□□□□□ -1.11
AFG2YLR397C SLX4Q12098 748 aa8.14□□□□□ -1.11
AFG2YLR397C PET123P17558 318 aa8.13□□□□□ -1.11
AFG2YLR397C SMY2P32909 740 aaKnown RBP8.13□□□□□ -1.11
AFG2YLR397C STE20Q03497 939 aaKnown RBP8.13□□□□□ -1.11
AFG2YLR397C PLP1Q04004 230 aa8.13□□□□□ -1.11
AFG2YLR397C DNF2Q12675 1612 aa8.13□□□□□ -1.11
AFG2YLR397C HAP1P0CE41 1502 aa8.13□□□□□ -1.11
AFG2YLR397C PRP16P15938 1071 aaPredicted RBP8.13□□□□□ -1.11
AFG2YLR397C SSA4P22202 642 aaKnown RBP8.13□□□□□ -1.11
AFG2YLR397C SHC1P39000 512 aa8.13□□□□□ -1.11
AFG2YLR397C ATG3P40344 310 aa8.13□□□□□ -1.11
AFG2YLR397C BTN2P53286 410 aa8.13□□□□□ -1.11
AFG2YLR397C YKU80Q04437 629 aa8.13□□□□□ -1.11
AFG2YLR397C SMC6Q12749 1114 aa8.13□□□□□ -1.11
AFG2YLR397C GDB1Q06625 1536 aa8.12□□□□□ -1.11
AFG2YLR397C SIP3P38717 1229 aa8.12□□□□□ -1.11
AFG2YLR397C NPR3P38742 1146 aa8.12□□□□□ -1.11
AFG2YLR397C ORM1P53224 222 aa8.12□□□□□ -1.11
AFG2YLR397C REX2P54964 269 aaKnown RBP8.12□□□□□ -1.11
AFG2YLR397C SGD1Q06132 899 aa8.12□□□□□ -1.11
AFG2YLR397C BIK1P11709 440 aa8.12□□□□□ -1.11
AFG2YLR397C PCH2P38126 564 aa8.12□□□□□ -1.11
AFG2YLR397C SDA1P53313 767 aaKnown RBP8.12□□□□□ -1.11
AFG2YLR397C HXT17P53631 564 aa8.12□□□□□ -1.11
AFG2YLR397C HEH2Q03281 663 aa8.12□□□□□ -1.11
AFG2YLR397C INP2Q03824 705 aa8.12□□□□□ -1.11
AFG2YLR397C YOR296WQ08748 1289 aa8.12□□□□□ -1.11
AFG2YLR397C AUS1Q08409 1394 aa8.12□□□□□ -1.11
AFG2YLR397C KEX1P09620 729 aa8.11□□□□□ -1.11
AFG2YLR397C PRE10P21242 288 aaKnown RBP RIP-Chip data8.11□□□□□ -1.11not detected
AFG2YLR397C CIC1P38779 376 aaKnown RBP8.11□□□□□ -1.11
AFG2YLR397C AIM21P40563 679 aa8.11□□□□□ -1.11
AFG2YLR397C MRD1Q06106 887 aaKnown RBP8.11□□□□□ -1.11
AFG2YLR397C YLR257WQ06146 321 aaKnown RBP8.11□□□□□ -1.11
AFG2YLR397C YOR223WQ12015 292 aa8.11□□□□□ -1.11
AFG2YLR397C RUD3Q12234 484 aaKnown RBP8.11□□□□□ -1.11
AFG2YLR397C APC2Q12440 853 aa8.11□□□□□ -1.11
AFG2YLR397C UGA3P26370 528 aa8.11□□□□□ -1.11
AFG2YLR397C TPD3P31383 635 aa8.11□□□□□ -1.11
AFG2YLR397C OSH3P38713 996 aaKnown RBP8.11□□□□□ -1.11
AFG2YLR397C SPT8P38915 602 aa8.11□□□□□ -1.11
AFG2YLR397C CCM1P48237 864 aaPredicted RBP8.11□□□□□ -1.11
AFG2YLR397C YMR111CQ04461 462 aaPredicted RBP8.11□□□□□ -1.11
AFG2YLR397C OMS1Q06668 471 aa8.11□□□□□ -1.11
AFG2YLR397C YOR1P53049 1477 aa8.1□□□□□ -1.11
AFG2YLR397C ATE1P16639 503 aa8.1□□□□□ -1.11
AFG2YLR397C CSE4P36012 229 aa8.1□□□□□ -1.11
AFG2YLR397C YKR018CP36114 725 aa8.1□□□□□ -1.11
AFG2YLR397C RTG3P38165 486 aa8.1□□□□□ -1.11
AFG2YLR397C RBA50Q04418 439 aa8.1□□□□□ -1.11
AFG2YLR397C YIG1Q08956 461 aa8.1□□□□□ -1.11
AFG2YLR397C JIP3O13555 125 aa8.09□□□□□ -1.11
AFG2YLR397C PDR1P12383 1068 aa8.09□□□□□ -1.11
AFG2YLR397C KDX1P36005 433 aa8.09□□□□□ -1.11
AFG2YLR397C GGA2P38817 585 aaKnown RBP8.09□□□□□ -1.11
AFG2YLR397C BRR1Q99177 341 aaPredicted RBP8.09□□□□□ -1.11
AFG2YLR397C RKR1Q04781 1562 aa8.09□□□□□ -1.11
AFG2YLR397C ARG1P22768 420 aa8.09□□□□□ -1.11
AFG2YLR397C MET4P32389 672 aa8.09□□□□□ -1.11
AFG2YLR397C ATO2P32907 282 aa8.09□□□□□ -1.11
AFG2YLR397C NUP60P39705 539 aa8.09□□□□□ -1.11
AFG2YLR397C MAD1P40957 749 aa8.09□□□□□ -1.11
AFG2YLR397C GDE1Q02979 1223 aa8.09□□□□□ -1.11
AFG2YLR397C GNT1Q12096 491 aa8.09□□□□□ -1.11
AFG2YLR397C CHS5Q12114 671 aaKnown RBP8.09□□□□□ -1.11
AFG2YLR397C CDC25P04821 1589 aa8.08□□□□□ -1.12
AFG2YLR397C ATG2P53855 1592 aa8.08□□□□□ -1.12
AFG2YLR397C RPC19P28000 142 aaKnown RBP8.08□□□□□ -1.12
AFG2YLR397C LHS1P36016 881 aa8.08□□□□□ -1.12
AFG2YLR397C MRX12P47084 519 aa8.08□□□□□ -1.12
AFG2YLR397C MBR1P23493 339 aa8.08□□□□□ -1.12
AFG2YLR397C PDB1P32473 366 aaKnown RBP8.08□□□□□ -1.12
AFG2YLR397C MUM2P38236 366 aa8.08□□□□□ -1.12
AFG2YLR397C SSZ1P38788 538 aaKnown RBP8.08□□□□□ -1.12
AFG2YLR397C VID28P40547 921 aa8.08□□□□□ -1.12
AFG2YLR397C FMS1P50264 508 aa8.08□□□□□ -1.12
AFG2YLR397C RSA3Q05942 220 aaKnown RBP8.08□□□□□ -1.12
AFG2YLR397C ATG13Q06628 738 aa8.08□□□□□ -1.12
AFG2YLR397C YDL073WQ07454 984 aa8.08□□□□□ -1.12
AFG2YLR397C FRS2P15625 503 aaKnown RBP8.07□□□□□ -1.12
AFG2YLR397C YEF3P16521 1044 aaKnown RBP8.07□□□□□ -1.12
AFG2YLR397C RRP43P25359 394 aaPredicted RBP8.07□□□□□ -1.12
AFG2YLR397C ACP1P32463 125 aa8.07□□□□□ -1.12
AFG2YLR397C TAF5P38129 798 aa8.07□□□□□ -1.12
AFG2YLR397C GYP7P48365 746 aa8.07□□□□□ -1.12
AFG2YLR397C SYH1Q02875 849 aaKnown RBP8.07□□□□□ -1.12
AFG2YLR397C PMR1P13586 950 aa8.07□□□□□ -1.12
AFG2YLR397C THR4P16120 514 aaKnown RBP8.07□□□□□ -1.12
AFG2YLR397C CLB4P24871 460 aa8.07□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 52.3 ms