RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W RRI2Q12348 645 aa11.94□□□□□ -0.5
SHH4YLR164W RPT3P33298 428 aaKnown RBP11.93□□□□□ -0.5
SHH4YLR164W AAP1P37898 856 aaKnown RBP11.93□□□□□ -0.5
SHH4YLR164W YER156CP40093 338 aaKnown RBP11.93□□□□□ -0.5
SHH4YLR164W GAS5Q08193 484 aa11.93□□□□□ -0.5
SHH4YLR164W FAS2P19097 1887 aaKnown RBP11.93□□□□□ -0.5
SHH4YLR164W KTR1P27810 393 aaKnown RBP11.92□□□□□ -0.5
SHH4YLR164W INM2Q05533 292 aa11.92□□□□□ -0.5
SHH4YLR164W YMR147WP40218 223 aaKnown RBP11.91□□□□□ -0.5
SHH4YLR164W PBY1P38254 753 aa11.9□□□□□ -0.5
SHH4YLR164W NUG1P40010 520 aaKnown RBP11.9□□□□□ -0.5
SHH4YLR164W GRX7P38068 203 aa11.89□□□□□ -0.51
SHH4YLR164W YIR014WP40570 242 aa11.89□□□□□ -0.51
SHH4YLR164W GRX6Q12438 231 aa11.89□□□□□ -0.51
SHH4YLR164W LAM4P38800 1345 aa11.88□□□□□ -0.51
SHH4YLR164W HKR1P41809 1802 aa11.88□□□□□ -0.51
SHH4YLR164W YKU70P32807 602 aa11.88□□□□□ -0.51
SHH4YLR164W GSM1P42950 618 aa11.88□□□□□ -0.51
SHH4YLR164W TOP1P04786 769 aa11.87□□□□□ -0.51
SHH4YLR164W PIF1P07271 859 aa11.87□□□□□ -0.51
SHH4YLR164W OPY1P38271 328 aa11.87□□□□□ -0.51
SHH4YLR164W PKH3Q03306 898 aaPredicted RBP11.87□□□□□ -0.51
SHH4YLR164W FLO11P08640 1367 aa11.87□□□□□ -0.51
SHH4YLR164W BBC1P47068 1157 aa11.86□□□□□ -0.51
SHH4YLR164W KAR5Q04746 504 aa11.86□□□□□ -0.51
SHH4YLR164W DPL1Q05567 589 aa11.86□□□□□ -0.51
SHH4YLR164W FPR4Q06205 392 aaPredicted RBP11.86□□□□□ -0.51
SHH4YLR164W DIP2Q12220 943 aaPredicted RBP11.86□□□□□ -0.51
SHH4YLR164W TRL1P09880 827 aaKnown RBP11.85□□□□□ -0.51
SHH4YLR164W PTK1P36002 662 aaPredicted RBP11.85□□□□□ -0.51
SHH4YLR164W STM1P39015 273 aaKnown RBP11.85□□□□□ -0.51
SHH4YLR164W YFH7P43591 353 aa11.85□□□□□ -0.51
SHH4YLR164W UBX2Q04228 584 aa11.84□□□□□ -0.51
SHH4YLR164W NSG2P53898 299 aa11.83□□□□□ -0.52
SHH4YLR164W WRS1Q12109 432 aaKnown RBP11.83□□□□□ -0.52
SHH4YLR164W RLF2Q12495 606 aa11.83□□□□□ -0.52
SHH4YLR164W ARG82P07250 355 aa11.82□□□□□ -0.52
SHH4YLR164W SNF3P10870 884 aa11.82□□□□□ -0.52
SHH4YLR164W OSH3P38713 996 aaKnown RBP11.82□□□□□ -0.52
SHH4YLR164W PGA3Q12746 312 aaKnown RBP11.82□□□□□ -0.52
SHH4YLR164W SHC1P39000 512 aa11.81□□□□□ -0.52
SHH4YLR164W JJJ2P46997 583 aa11.81□□□□□ -0.52
SHH4YLR164W PRP42Q03776 544 aaKnown RBP11.81□□□□□ -0.52
SHH4YLR164W GAP1P19145 602 aaPredicted RBP11.8□□□□□ -0.52
SHH4YLR164W OPI1P21957 404 aa11.8□□□□□ -0.52
SHH4YLR164W AIM9P40053 627 aaKnown RBP11.8□□□□□ -0.52
SHH4YLR164W SQS1P53866 767 aaKnown RBP11.8□□□□□ -0.52
SHH4YLR164W PPM2Q08282 695 aa11.8□□□□□ -0.52
SHH4YLR164W FLO1P32768 1537 aa11.8□□□□□ -0.52
SHH4YLR164W COQ1P18900 473 aa11.79□□□□□ -0.52
SHH4YLR164W RPS7AP26786 190 aaKnown RBP11.79□□□□□ -0.52
SHH4YLR164W AFG2P32794 780 aa11.79□□□□□ -0.52
SHH4YLR164W TAH18Q12181 623 aa11.79□□□□□ -0.52
SHH4YLR164W CYB2P00175 591 aa11.78□□□□□ -0.52
SHH4YLR164W CHO2P05374 869 aaKnown RBP11.78□□□□□ -0.52
SHH4YLR164W PCT1P13259 424 aa11.78□□□□□ -0.52
SHH4YLR164W BOI1P38041 980 aaKnown RBP11.78□□□□□ -0.52
SHH4YLR164W CIC1P38779 376 aaKnown RBP11.78□□□□□ -0.52
SHH4YLR164W IRC8P47046 822 aa11.78□□□□□ -0.52
SHH4YLR164W ATG20Q07528 640 aa11.78□□□□□ -0.52
SHH4YLR164W RRG1Q12167 365 aaPredicted RBP11.78□□□□□ -0.52
SHH4YLR164W MDL2P33311 773 aa11.77□□□□□ -0.53
SHH4YLR164W STV1P37296 890 aa11.77□□□□□ -0.53
SHH4YLR164W SSA1P10591 642 aaKnown RBP11.75□□□□□ -0.53
SHH4YLR164W TIF4632P39936 914 aaKnown RBP11.75□□□□□ -0.53
SHH4YLR164W IOC3P43596 787 aa11.75□□□□□ -0.53
SHH4YLR164W PSF3Q12146 194 aa11.75□□□□□ -0.53
SHH4YLR164W MET1P36150 593 aa11.74□□□□□ -0.53
SHH4YLR164W YHL050CP38721 697 aa11.74□□□□□ -0.53
SHH4YLR164W NPL4P33755 580 aa11.73□□□□□ -0.53
SHH4YLR164W VPS4P52917 437 aa11.73□□□□□ -0.53
SHH4YLR164W PUS6P53294 404 aa11.73□□□□□ -0.53
SHH4YLR164W HDA1P53973 706 aa11.73□□□□□ -0.53
SHH4YLR164W IME2P32581 645 aa11.72□□□□□ -0.53
SHH4YLR164W UTP7P40055 554 aaKnown RBP11.72□□□□□ -0.53
SHH4YLR164W KRI1P42846 591 aaKnown RBP11.72□□□□□ -0.53
SHH4YLR164W APL6P46682 809 aa11.72□□□□□ -0.53
SHH4YLR164W TRM44Q02648 567 aaKnown RBP11.72□□□□□ -0.53
SHH4YLR164W RNR2P09938 399 aaKnown RBP11.71□□□□□ -0.53
SHH4YLR164W SRS2P12954 1174 aa11.71□□□□□ -0.53
SHH4YLR164W IMP2'P32351 346 aa11.71□□□□□ -0.53
SHH4YLR164W YJL171CP46992 396 aa11.71□□□□□ -0.53
SHH4YLR164W NPA3P47122 385 aa11.71□□□□□ -0.53
SHH4YLR164W MTC3P53077 123 aa11.71□□□□□ -0.53
SHH4YLR164W FPK1P53739 893 aa11.71□□□□□ -0.53
SHH4YLR164W ECM23Q02710 187 aa11.71□□□□□ -0.53
SHH4YLR164W TSR3Q12094 313 aaKnown RBP11.71□□□□□ -0.53
SHH4YLR164W GEF1P37020 779 aa11.7□□□□□ -0.54
SHH4YLR164W SLI15P38283 698 aa11.7□□□□□ -0.54
SHH4YLR164W VID28P40547 921 aa11.7□□□□□ -0.54
SHH4YLR164W PTK2P47116 818 aaKnown RBP11.7□□□□□ -0.54
SHH4YLR164W PIP2P52960 996 aa11.7□□□□□ -0.54
SHH4YLR164W VPS20Q04272 221 aa11.7□□□□□ -0.54
SHH4YLR164W MSM1P22438 575 aa11.69□□□□□ -0.54
SHH4YLR164W PEP3P27801 918 aa11.69□□□□□ -0.54
SHH4YLR164W SKI2P35207 1287 aaKnown RBP RIP-Chip data11.69□□□□□ -0.54not detected
SHH4YLR164W ENP2P48234 707 aaKnown RBP11.69□□□□□ -0.54
SHH4YLR164W ACK1Q07622 623 aaPredicted RBP11.69□□□□□ -0.54
SHH4YLR164W SSF2Q12153 453 aaPredicted RBP11.69□□□□□ -0.54
SHH4YLR164W FET4P40988 552 aa11.68□□□□□ -0.54
Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms