RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeastyeast

Gene BUD28, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD28YLR062C UBP12P39538 1254 aa6.28□□□□□ -1.4
BUD28YLR062C VHR2P40041 505 aa6.28□□□□□ -1.4
BUD28YLR062C YGR117CP53270 476 aa6.28□□□□□ -1.4
BUD28YLR062C RPT4P53549 437 aaKnown RBP6.28□□□□□ -1.4
BUD28YLR062C UBX2Q04228 584 aa6.28□□□□□ -1.4
BUD28YLR062C THI3Q07471 609 aa6.28□□□□□ -1.4
BUD28YLR062C GSC2P40989 1895 aa6.28□□□□□ -1.4
BUD28YLR062C VMA1P17255 1071 aaKnown RBP6.27□□□□□ -1.41
BUD28YLR062C AFG2P32794 780 aa6.27□□□□□ -1.41
BUD28YLR062C NGR1P32831 672 aaKnown RBP6.27□□□□□ -1.41
BUD28YLR062C HXT10P43581 546 aa6.27□□□□□ -1.41
BUD28YLR062C YPP1P46951 817 aa6.27□□□□□ -1.41
BUD28YLR062C TRM44Q02648 567 aaKnown RBP6.27□□□□□ -1.41
BUD28YLR062C CDC45Q08032 650 aa6.27□□□□□ -1.41
BUD28YLR062C NOP8Q08287 484 aaPredicted RBP6.27□□□□□ -1.41
BUD28YLR062C RRG1Q12167 365 aaPredicted RBP6.27□□□□□ -1.41
BUD28YLR062C STV1P37296 890 aa6.26□□□□□ -1.41
BUD28YLR062C BOI2P39969 1040 aa6.26□□□□□ -1.41
BUD28YLR062C YIL089WP40500 205 aa6.26□□□□□ -1.41
BUD28YLR062C EMP47P43555 445 aa6.26□□□□□ -1.41
BUD28YLR062C VPS4P52917 437 aa6.26□□□□□ -1.41
BUD28YLR062C AIM7Q12156 149 aa6.26□□□□□ -1.41
BUD28YLR062C MAK21Q12176 1025 aaKnown RBP6.26□□□□□ -1.41
BUD28YLR062C FLO11P08640 1367 aa6.26□□□□□ -1.41
BUD28YLR062C HPR1P17629 752 aaKnown RBP6.25□□□□□ -1.41
BUD28YLR062C LCB1P25045 558 aaKnown RBP6.25□□□□□ -1.41
BUD28YLR062C ETP1P38748 585 aaKnown RBP6.25□□□□□ -1.41
BUD28YLR062C UBP9P39967 754 aa6.25□□□□□ -1.41
BUD28YLR062C PEA2P40091 420 aa6.25□□□□□ -1.41
BUD28YLR062C CSI1Q04368 295 aa6.25□□□□□ -1.41
BUD28YLR062C CRF1Q04930 467 aa6.25□□□□□ -1.41
BUD28YLR062C WSC3Q12215 556 aa6.25□□□□□ -1.41
BUD28YLR062C RVB2Q12464 471 aaKnown RBP6.25□□□□□ -1.41
BUD28YLR062C SUP35P05453 685 aaKnown RBP6.24□□□□□ -1.41
BUD28YLR062C RPS19AP07280 144 aaKnown RBP6.24□□□□□ -1.41
BUD28YLR062C RPS19BP07281 144 aaPredicted RBP6.24□□□□□ -1.41
BUD28YLR062C GSM1P42950 618 aa6.24□□□□□ -1.41
BUD28YLR062C IRC4Q03036 179 aa6.24□□□□□ -1.41
BUD28YLR062C SRC1Q03707 834 aa6.24□□□□□ -1.41
BUD28YLR062C PRP42Q03776 544 aaKnown RBP6.24□□□□□ -1.41
BUD28YLR062C TOS4Q06266 489 aa6.24□□□□□ -1.41
BUD28YLR062C ADR1P07248 1323 aa6.24□□□□□ -1.41
BUD28YLR062C EDS1P38073 919 aa6.23□□□□□ -1.41
BUD28YLR062C DUS1P53759 423 aaKnown RBP6.23□□□□□ -1.41
BUD28YLR062C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
BUD28YLR062C TYW1Q08960 810 aaKnown RBP6.23□□□□□ -1.41
BUD28YLR062C SNU66Q12420 587 aaPredicted RBP6.23□□□□□ -1.41
BUD28YLR062C POM152P39685 1337 aa6.23□□□□□ -1.41
BUD28YLR062C ARG82P07250 355 aa6.22□□□□□ -1.41
BUD28YLR062C NUG1P40010 520 aaKnown RBP6.22□□□□□ -1.41
BUD28YLR062C YIL092WP40497 633 aa6.22□□□□□ -1.41
BUD28YLR062C YRB30P53107 440 aaPredicted RBP6.22□□□□□ -1.41
BUD28YLR062C CWC15Q03772 175 aaKnown RBP6.22□□□□□ -1.41
BUD28YLR062C PTC3P34221 468 aaKnown RBP6.21□□□□□ -1.42
BUD28YLR062C UTP7P40055 554 aaKnown RBP6.21□□□□□ -1.42
BUD28YLR062C WRS1Q12109 432 aaKnown RBP6.21□□□□□ -1.42
BUD28YLR062C VPS13Q07878 3144 aa6.21□□□□□ -1.42
BUD28YLR062C DAL5P15365 543 aa6.2□□□□□ -1.42
BUD28YLR062C RPS7AP26786 190 aaKnown RBP6.2□□□□□ -1.42
BUD28YLR062C JJJ2P46997 583 aa6.2□□□□□ -1.42
BUD28YLR062C VPS70P47161 811 aa6.2□□□□□ -1.42
BUD28YLR062C ATH1P48016 1211 aa6.2□□□□□ -1.42
BUD28YLR062C MTC3P53077 123 aa6.2□□□□□ -1.42
BUD28YLR062C ACK1Q07622 623 aaPredicted RBP6.2□□□□□ -1.42
BUD28YLR062C YBL029C-AQ3E756 94 aa6.2□□□□□ -1.42
BUD28YLR062C CBP1P07252 654 aa6.19□□□□□ -1.42
BUD28YLR062C SEC18P18759 758 aaKnown RBP6.19□□□□□ -1.42
BUD28YLR062C GLO3P38682 493 aaKnown RBP6.19□□□□□ -1.42
BUD28YLR062C YJL171CP46992 396 aa6.19□□□□□ -1.42
BUD28YLR062C SEN54Q02825 467 aaPredicted RBP6.19□□□□□ -1.42
BUD28YLR062C PSF3Q12146 194 aa6.19□□□□□ -1.42
BUD28YLR062C GYP5Q12344 894 aa6.19□□□□□ -1.42
BUD28YLR062C SLA1P32790 1244 aa6.18□□□□□ -1.42
BUD28YLR062C PNT1P38969 423 aa6.18□□□□□ -1.42
BUD28YLR062C YOL036WQ08206 761 aa6.18□□□□□ -1.42
BUD28YLR062C HVG1P0CE11 249 aa6.17□□□□□ -1.42
BUD28YLR062C GCD7P32502 381 aaPredicted RBP6.17□□□□□ -1.42
BUD28YLR062C RPT3P33298 428 aaKnown RBP6.17□□□□□ -1.42
BUD28YLR062C YNG2P38806 282 aaKnown RBP6.17□□□□□ -1.42
BUD28YLR062C YFH7P43591 353 aa6.17□□□□□ -1.42
BUD28YLR062C SAM3Q08986 587 aa6.17□□□□□ -1.42
BUD28YLR062C RAD2P07276 1031 aa6.16□□□□□ -1.42
BUD28YLR062C PRS1P32895 427 aaKnown RBP6.16□□□□□ -1.42
BUD28YLR062C PCS60P38137 543 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
BUD28YLR062C SSF1P38789 453 aaPredicted RBP6.16□□□□□ -1.42
BUD28YLR062C HAL5P38970 855 aaKnown RBP6.16□□□□□ -1.42
BUD28YLR062C ILV3P39522 585 aaKnown RBP6.16□□□□□ -1.42
BUD28YLR062C HGH1P48362 394 aaKnown RBP6.16□□□□□ -1.42
BUD28YLR062C RRT6P53117 311 aaPredicted RBP6.16□□□□□ -1.42
BUD28YLR062C PUS6P53294 404 aa6.16□□□□□ -1.42
BUD28YLR062C SPO1P53541 631 aa6.16□□□□□ -1.42
BUD28YLR062C YPR148CQ06523 435 aa6.16□□□□□ -1.42
BUD28YLR062C CSR2Q12734 1121 aa6.16□□□□□ -1.42
BUD28YLR062C BSD2P38356 321 aa6.15□□□□□ -1.42
BUD28YLR062C NIT1P40447 199 aa6.15□□□□□ -1.42
BUD28YLR062C YIR042CP40586 236 aa6.15□□□□□ -1.42
BUD28YLR062C YNL193WP53870 558 aa6.15□□□□□ -1.42
BUD28YLR062C INM2Q05533 292 aa6.15□□□□□ -1.42
BUD28YLR062C RPN7Q06103 429 aaKnown RBP6.15□□□□□ -1.42
BUD28YLR062C SRF1Q12516 437 aa6.15□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms