RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W MKS1P34072 584 aa7.33□□□□□ -1.24
CBF1YJR060W THI12P42883 340 aa7.32□□□□□ -1.24
CBF1YJR060W THI5P43534 340 aa7.32□□□□□ -1.24
CBF1YJR060W THI11P47183 340 aa7.32□□□□□ -1.24
CBF1YJR060W THI13Q07748 340 aa7.32□□□□□ -1.24
CBF1YJR060W RDS2P19541 446 aaKnown RBP7.31□□□□□ -1.24
CBF1YJR060W SSA4P22202 642 aaKnown RBP7.31□□□□□ -1.24
CBF1YJR060W YBL086CP38177 466 aa7.31□□□□□ -1.24
CBF1YJR060W SOH1P38633 127 aa7.31□□□□□ -1.24
CBF1YJR060W SLX8P40072 274 aa7.31□□□□□ -1.24
CBF1YJR060W APL6P46682 809 aa7.31□□□□□ -1.24
CBF1YJR060W MSB3P48566 633 aaPredicted RBP7.31□□□□□ -1.24
CBF1YJR060W ISR1Q06098 443 aaKnown RBP7.31□□□□□ -1.24
CBF1YJR060W RIA1P53893 1110 aa7.3□□□□□ -1.24
CBF1YJR060W GCR2Q01722 534 aa7.3□□□□□ -1.24
CBF1YJR060W YRF1-2P40105 1681 aa7.3□□□□□ -1.24
CBF1YJR060W RAD9P14737 1309 aa7.29□□□□□ -1.24
CBF1YJR060W FBP26P32604 452 aa7.29□□□□□ -1.24
CBF1YJR060W BRE2P43132 505 aa7.29□□□□□ -1.24
CBF1YJR060W UTP13Q05946 817 aaKnown RBP7.29□□□□□ -1.24
CBF1YJR060W NAP1P25293 417 aaKnown RBP7.28□□□□□ -1.24
CBF1YJR060W DFG5Q05031 458 aa7.28□□□□□ -1.24
CBF1YJR060W TY3B-IQ7LHG5 1498 aaKnown RBP7.28□□□□□ -1.24
CBF1YJR060W TTI1P36097 1038 aa7.27□□□□□ -1.25
CBF1YJR060W ALD4P46367 519 aaKnown RBP7.27□□□□□ -1.25
CBF1YJR060W YJR115WP47152 169 aa7.27□□□□□ -1.25
CBF1YJR060W YNR029CP53729 429 aaKnown RBP7.27□□□□□ -1.25
CBF1YJR060W BDS1Q08347 646 aa7.27□□□□□ -1.25
CBF1YJR060W TY4B-HP0C2J7 1802 aa7.27□□□□□ -1.25
CBF1YJR060W TY4B-JP47024 1803 aa7.27□□□□□ -1.25
CBF1YJR060W SIS2P36024 562 aa7.26□□□□□ -1.25
CBF1YJR060W ESL2P36168 1195 aa7.26□□□□□ -1.25
CBF1YJR060W ISU1Q03020 165 aa7.26□□□□□ -1.25
CBF1YJR060W CAB1Q04430 367 aa7.26□□□□□ -1.25
CBF1YJR060W SRF1Q12516 437 aa7.26□□□□□ -1.25
CBF1YJR060W CPS1P27614 576 aa7.25□□□□□ -1.25
CBF1YJR060W HAL5P38970 855 aaKnown RBP7.25□□□□□ -1.25
CBF1YJR060W RRP5Q05022 1729 aaKnown RBP7.24□□□□□ -1.25
CBF1YJR060W STE6P12866 1290 aa7.24□□□□□ -1.25
CBF1YJR060W PEP12P32854 288 aa7.24□□□□□ -1.25
CBF1YJR060W KTR7P40504 517 aa7.24□□□□□ -1.25
CBF1YJR060W NOP8Q08287 484 aaPredicted RBP7.24□□□□□ -1.25
CBF1YJR060W ARG82P07250 355 aa7.23□□□□□ -1.25
CBF1YJR060W PTK2P47116 818 aaKnown RBP7.23□□□□□ -1.25
CBF1YJR060W RPP2BP02400 110 aaKnown RBP7.22□□□□□ -1.25
CBF1YJR060W DAT1P13483 248 aaKnown RBP7.22□□□□□ -1.25
CBF1YJR060W MIP1P15801 1254 aa7.22□□□□□ -1.25
CBF1YJR060W MLP1Q02455 1875 aaKnown RBP7.21□□□□□ -1.25
CBF1YJR060W UTR2P32623 467 aa7.21□□□□□ -1.26
CBF1YJR060W TAF5P38129 798 aa7.21□□□□□ -1.26
CBF1YJR060W HDA3Q06623 655 aa7.21□□□□□ -1.26
CBF1YJR060W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.21□□□□□ -1.26not detected
CBF1YJR060W YLR419WQ06698 1435 aaKnown RBP7.2□□□□□ -1.26
CBF1YJR060W SCT1P32784 759 aa7.2□□□□□ -1.26
CBF1YJR060W AAD14P42884 376 aa7.2□□□□□ -1.26
CBF1YJR060W RPL34AP87262 121 aaPredicted RBP7.2□□□□□ -1.26
CBF1YJR060W SPT2P06843 333 aaPredicted RBP7.19□□□□□ -1.26
CBF1YJR060W TGL4P36165 910 aa7.19□□□□□ -1.26
CBF1YJR060W TBS1P38114 1094 aa7.19□□□□□ -1.26
CBF1YJR060W DLD3P39976 496 aaKnown RBP7.18□□□□□ -1.26
CBF1YJR060W TAF8Q03750 510 aa7.18□□□□□ -1.26
CBF1YJR060W WTM2Q12206 467 aa7.18□□□□□ -1.26
CBF1YJR060W YFL034WP43564 1073 aa7.17□□□□□ -1.26
CBF1YJR060W NUP85P46673 744 aa7.17□□□□□ -1.26
CBF1YJR060W PSK1P31374 1356 aa7.17□□□□□ -1.26
CBF1YJR060W PDI1P17967 522 aaKnown RBP7.16□□□□□ -1.26
CBF1YJR060W AIM9P40053 627 aaKnown RBP7.16□□□□□ -1.26
CBF1YJR060W TSC13Q99190 310 aa7.16□□□□□ -1.26
CBF1YJR060W GAL2P13181 574 aa7.15□□□□□ -1.26
CBF1YJR060W PHO87P25360 923 aa7.15□□□□□ -1.26
CBF1YJR060W DLD1P32891 587 aa7.15□□□□□ -1.26
CBF1YJR060W ECM23Q02710 187 aa7.15□□□□□ -1.26
CBF1YJR060W SPE2P21182 396 aa7.14□□□□□ -1.27
CBF1YJR060W SLD2P34252 453 aa7.14□□□□□ -1.27
CBF1YJR060W KIP3P53086 805 aaKnown RBP7.14□□□□□ -1.27
CBF1YJR060W LSC2P53312 427 aa7.14□□□□□ -1.27
CBF1YJR060W YLR346CQ06139 101 aa7.14□□□□□ -1.27
CBF1YJR060W ADE6P38972 1358 aaKnown RBP7.13□□□□□ -1.27
CBF1YJR060W HAP4P14064 554 aa7.13□□□□□ -1.27
CBF1YJR060W PUP1P25043 261 aa7.13□□□□□ -1.27
CBF1YJR060W NTH2P35172 780 aa7.13□□□□□ -1.27
CBF1YJR060W NOB1Q08444 459 aaKnown RBP7.13□□□□□ -1.27
CBF1YJR060W MET22P32179 357 aa7.12□□□□□ -1.27
CBF1YJR060W CDC3P32457 520 aaKnown RBP7.12□□□□□ -1.27
CBF1YJR060W ACS2P52910 683 aaKnown RBP7.12□□□□□ -1.27
CBF1YJR060W RCM1P53972 490 aa7.12□□□□□ -1.27
CBF1YJR060W FKS3Q04952 1785 aa7.12□□□□□ -1.27
CBF1YJR060W UTP7P40055 554 aaKnown RBP7.11□□□□□ -1.27
CBF1YJR060W SWI5P08153 709 aa7.1□□□□□ -1.27
CBF1YJR060W RPS6AP0CX37 236 aaKnown RBP7.1□□□□□ -1.27
CBF1YJR060W RPS6BP0CX38 236 aaPredicted RBP7.1□□□□□ -1.27
CBF1YJR060W YJR098CP47139 656 aa7.1□□□□□ -1.27
CBF1YJR060W YDR444WQ04093 687 aa7.1□□□□□ -1.27
CBF1YJR060W OPT2Q06593 877 aa7.1□□□□□ -1.27
CBF1YJR060W YIL177CP40434 1758 aa7.1□□□□□ -1.27
CBF1YJR060W YJL225CP40889 1758 aa7.1□□□□□ -1.27
CBF1YJR060W UBX7P38349 436 aa7.09□□□□□ -1.27
CBF1YJR060W GAS4Q08271 471 aa7.09□□□□□ -1.27
CBF1YJR060W URB1P34241 1764 aaKnown RBP7.08□□□□□ -1.28
CBF1YJR060W SUM1P46676 1062 aa7.08□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms