RNA–Protein interactions for RNA: YJL179W

PFD1, Transcript of Subunit of heterohexameric prefoldin, yeast

Gene PFD1, Length 330 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PFD1	YJL179W	AIM9	P40053	627 aa	Known RBP	4.5	□□□□□ -1.69
PFD1	YJL179W	RPS6A	P0CX37	236 aa	Known RBP	4.49	□□□□□ -1.69
PFD1	YJL179W	RPS6B	P0CX38	236 aa	Predicted RBP	4.49	□□□□□ -1.69
PFD1	YJL179W	YDJ1	P25491	409 aa	Known RBP	4.49	□□□□□ -1.69
PFD1	YJL179W	NGR1	P32831	672 aa	Known RBP	4.49	□□□□□ -1.69
PFD1	YJL179W	SPO74	P45819	413 aa		4.49	□□□□□ -1.69
PFD1	YJL179W	Q0182	Q9ZZW1	134 aa		4.49	□□□□□ -1.69
PFD1	YJL179W	NIT1	P40447	199 aa		4.48	□□□□□ -1.69
PFD1	YJL179W	YFL034W	P43564	1073 aa		4.48	□□□□□ -1.69
PFD1	YJL179W	MTO1	P53070	669 aa		4.48	□□□□□ -1.69
PFD1	YJL179W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.47	□□□□□ -1.69	not detected
PFD1	YJL179W	APM2	P38700	605 aa		4.46	□□□□□ -1.7
PFD1	YJL179W	TY1A-NL1	Q12391	440 aa	Known RBP	4.46	□□□□□ -1.7
PFD1	YJL179W	TY4B-P	A0A0B7P3V8	1104 aa		4.45	□□□□□ -1.7
PFD1	YJL179W	YBL036C	P38197	257 aa		4.45	□□□□□ -1.7
PFD1	YJL179W	AKR1	P39010	764 aa		4.45	□□□□□ -1.7
PFD1	YJL179W	TY4A-H	Q6Q5P6	413 aa		4.45	□□□□□ -1.7
PFD1	YJL179W	CUS1	Q02554	436 aa	Predicted RBP	4.44	□□□□□ -1.7
PFD1	YJL179W	UTP4	Q06679	776 aa	Known RBP	4.44	□□□□□ -1.7
PFD1	YJL179W	SEG2	P34250	1132 aa		4.43	□□□□□ -1.7
PFD1	YJL179W	NTH2	P35172	780 aa		4.43	□□□□□ -1.7
PFD1	YJL179W	DMA1	P38823	416 aa		4.43	□□□□□ -1.7
PFD1	YJL179W	NAM7	P30771	971 aa	Known RBP	4.42	□□□□□ -1.7
PFD1	YJL179W	ECL1	P48235	211 aa		4.42	□□□□□ -1.7
PFD1	YJL179W	DSE4	P53753	1117 aa		4.42	□□□□□ -1.7
PFD1	YJL179W	MSB1	P21339	1137 aa	Known RBP	4.41	□□□□□ -1.7
PFD1	YJL179W	KAP122	P32767	1081 aa		4.41	□□□□□ -1.7
PFD1	YJL179W	YNR040W	P53736	256 aa		4.41	□□□□□ -1.7
PFD1	YJL179W	ESC8	Q08119	714 aa		4.41	□□□□□ -1.7
PFD1	YJL179W	REC8	Q12188	680 aa		4.4	□□□□□ -1.71
PFD1	YJL179W	MRP10	O75012	95 aa		4.39	□□□□□ -1.71
PFD1	YJL179W	GIP2	P40036	548 aa		4.39	□□□□□ -1.71
PFD1	YJL179W	TED1	P40533	473 aa		4.39	□□□□□ -1.71
PFD1	YJL179W	PRP43	P53131	767 aa	Known RBP	4.39	□□□□□ -1.71
PFD1	YJL179W	IDI1	P15496	288 aa		4.38	□□□□□ -1.71
PFD1	YJL179W	LRG1	P35688	1017 aa		4.38	□□□□□ -1.71
PFD1	YJL179W	SCD5	P34758	872 aa		4.37	□□□□□ -1.71
PFD1	YJL179W	SUP45	P12385	437 aa	Known RBP	4.36	□□□□□ -1.71
PFD1	YJL179W	KIN1	P13185	1064 aa		4.36	□□□□□ -1.71
PFD1	YJL179W	RPC31	P17890	251 aa		4.36	□□□□□ -1.71
PFD1	YJL179W	POL12	P38121	705 aa	Predicted RBP	4.36	□□□□□ -1.71
PFD1	YJL179W	YER156C	P40093	338 aa	Known RBP	4.36	□□□□□ -1.71
PFD1	YJL179W	CYT1	P07143	309 aa		4.35	□□□□□ -1.71
PFD1	YJL179W	SEA4	P38164	1038 aa		4.34	□□□□□ -1.71
PFD1	YJL179W	GIP4	P39732	760 aa		4.34	□□□□□ -1.71
PFD1	YJL179W	TSC13	Q99190	310 aa		4.34	□□□□□ -1.71
PFD1	YJL179W	DFG16	Q99234	619 aa		4.34	□□□□□ -1.71
PFD1	YJL179W	ENO2	P00925	437 aa	Known RBP	4.33	□□□□□ -1.72
PFD1	YJL179W	PDI1	P17967	522 aa	Known RBP	4.33	□□□□□ -1.72
PFD1	YJL179W	SOK2	P53438	785 aa	Predicted RBP	4.33	□□□□□ -1.72
PFD1	YJL179W	SDH1	Q00711	640 aa		4.33	□□□□□ -1.72
PFD1	YJL179W	GAS1	P22146	559 aa	Known RBP	4.32	□□□□□ -1.72
PFD1	YJL179W	TAF1	P46677	1066 aa		4.32	□□□□□ -1.72
PFD1	YJL179W	RIM21	P48565	533 aa		4.32	□□□□□ -1.72
PFD1	YJL179W	RDS2	P19541	446 aa	Known RBP	4.31	□□□□□ -1.72
PFD1	YJL179W	GUA1	P38625	525 aa	Known RBP	4.31	□□□□□ -1.72
PFD1	YJL179W	BRL1	P38770	471 aa		4.31	□□□□□ -1.72
PFD1	YJL179W	BIO2	P32451	375 aa		4.3	□□□□□ -1.72
PFD1	YJL179W	ITC1	P53125	1264 aa		4.3	□□□□□ -1.72
PFD1	YJL179W	RSC2	Q06488	889 aa		4.3	□□□□□ -1.72
PFD1	YJL179W	YNL108C	P53929	270 aa		4.29	□□□□□ -1.72
PFD1	YJL179W	HDA2	Q06629	674 aa		4.29	□□□□□ -1.72
PFD1	YJL179W	HXT5	P38695	592 aa		4.28	□□□□□ -1.72
PFD1	YJL179W	QDR2	P40474	542 aa		4.27	□□□□□ -1.73
PFD1	YJL179W	UBP1	P25037	809 aa		4.26	□□□□□ -1.73
PFD1	YJL179W	YHL008C	P38750	627 aa		4.26	□□□□□ -1.73
PFD1	YJL179W	LEM3	P42838	414 aa		4.26	□□□□□ -1.73
PFD1	YJL179W	NCE103	P53615	221 aa		4.26	□□□□□ -1.73
PFD1	YJL179W	CDA2	Q06703	312 aa		4.26	□□□□□ -1.73
PFD1	YJL179W	GCD1	P09032	578 aa	Predicted RBP	4.25	□□□□□ -1.73
PFD1	YJL179W	MAE1	P36013	669 aa	Known RBP	4.25	□□□□□ -1.73
PFD1	YJL179W	PAN5	P38787	379 aa		4.25	□□□□□ -1.73
PFD1	YJL179W	YOR296W	Q08748	1289 aa		4.25	□□□□□ -1.73
PFD1	YJL179W	NSI1	Q12457	570 aa		4.25	□□□□□ -1.73
PFD1	YJL179W	GIC2	Q06648	383 aa		4.24	□□□□□ -1.73
PFD1	YJL179W	TSA1	P34760	196 aa	Known RBP	4.23	□□□□□ -1.73
PFD1	YJL179W	THI80	P35202	319 aa		4.23	□□□□□ -1.73
PFD1	YJL179W	GUP1	P53154	560 aa		4.23	□□□□□ -1.73
PFD1	YJL179W	TAD3	Q9URQ3	322 aa		4.22	□□□□□ -1.73
PFD1	YJL179W	POL5	P39985	1022 aa	Known RBP	4.21	□□□□□ -1.74
PFD1	YJL179W	YJL181W	P46987	611 aa		4.21	□□□□□ -1.74
PFD1	YJL179W	YNR065C	P53751	1116 aa		4.21	□□□□□ -1.74
PFD1	YJL179W	PKC1	P24583	1151 aa		4.2	□□□□□ -1.74
PFD1	YJL179W	FLR1	P38124	548 aa		4.2	□□□□□ -1.74
PFD1	YJL179W	GSF2	Q04697	403 aa	Known RBP	4.2	□□□□□ -1.74
PFD1	YJL179W	GIP1	P38229	639 aa		4.19	□□□□□ -1.74
PFD1	YJL179W	PPT1	P53043	513 aa		4.19	□□□□□ -1.74
PFD1	YJL179W	MRX10	Q05648	414 aa		4.19	□□□□□ -1.74
PFD1	YJL179W	GAS4	Q08271	471 aa		4.19	□□□□□ -1.74
PFD1	YJL179W	PRP6	P19735	899 aa	Predicted RBP	4.18	□□□□□ -1.74
PFD1	YJL179W	HSP78	P33416	811 aa		4.18	□□□□□ -1.74
PFD1	YJL179W	DYS1	P38791	387 aa		4.18	□□□□□ -1.74
PFD1	YJL179W	INP51	P40559	946 aa	Known RBP	4.18	□□□□□ -1.74
PFD1	YJL179W	MMM1	P41800	426 aa		4.18	□□□□□ -1.74
PFD1	YJL179W	HAP4	P14064	554 aa		4.17	□□□□□ -1.74
PFD1	YJL179W	PHO87	P25360	923 aa		4.17	□□□□□ -1.74
PFD1	YJL179W	CIT3	P43635	486 aa		4.17	□□□□□ -1.74
PFD1	YJL179W	ACS2	P52910	683 aa	Known RBP	4.17	□□□□□ -1.74
PFD1	YJL179W	SPO71	Q03868	1245 aa		4.17	□□□□□ -1.74
PFD1	YJL179W	SOG2	Q08817	791 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 59.4 ms