RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeast

Gene MET28, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MET28	YIR017C	SET4	P42948	560 aa		11.62	□□□□□ -0.55
MET28	YIR017C	AAD16	Q02895	342 aa		11.62	□□□□□ -0.55
MET28	YIR017C	PRP42	Q03776	544 aa	Known RBP	11.62	□□□□□ -0.55
MET28	YIR017C	RRG1	Q12167	365 aa	Predicted RBP	11.62	□□□□□ -0.55
MET28	YIR017C	RAD50	P12753	1312 aa		11.61	□□□□□ -0.55
MET28	YIR017C	KTR3	P38130	404 aa	Predicted RBP	11.61	□□□□□ -0.55
MET28	YIR017C	SLI15	P38283	698 aa		11.61	□□□□□ -0.55
MET28	YIR017C	GLO3	P38682	493 aa	Known RBP	11.61	□□□□□ -0.55
MET28	YIR017C	HAL5	P38970	855 aa	Known RBP	11.61	□□□□□ -0.55
MET28	YIR017C	GSM1	P42950	618 aa		11.61	□□□□□ -0.55
MET28	YIR017C	RMD1	Q03441	430 aa		11.61	□□□□□ -0.55
MET28	YIR017C	YFH7	P43591	353 aa		11.59	□□□□□ -0.55
MET28	YIR017C	CRF1	Q04930	467 aa		11.59	□□□□□ -0.55
MET28	YIR017C	INM2	Q05533	292 aa		11.59	□□□□□ -0.55
MET28	YIR017C	VAS1	P07806	1104 aa	Known RBP	11.58	□□□□□ -0.56
MET28	YIR017C	PBY1	P38254	753 aa		11.58	□□□□□ -0.56
MET28	YIR017C	YIR042C	P40586	236 aa		11.58	□□□□□ -0.56
MET28	YIR017C	GAS5	Q08193	484 aa		11.58	□□□□□ -0.56
MET28	YIR017C	WRS1	Q12109	432 aa	Known RBP	11.58	□□□□□ -0.56
MET28	YIR017C	RPC31	P17890	251 aa		11.57	□□□□□ -0.56
MET28	YIR017C	AFG2	P32794	780 aa		11.57	□□□□□ -0.56
MET28	YIR017C	RPT3	P33298	428 aa	Known RBP	11.57	□□□□□ -0.56
MET28	YIR017C	OSH3	P38713	996 aa	Known RBP	11.57	□□□□□ -0.56
MET28	YIR017C	TOS4	Q06266	489 aa		11.57	□□□□□ -0.56
MET28	YIR017C	CYB2	P00175	591 aa		11.56	□□□□□ -0.56
MET28	YIR017C	KTR1	P27810	393 aa	Known RBP	11.56	□□□□□ -0.56
MET28	YIR017C	NOP2	P40991	618 aa	Known RBP	11.56	□□□□□ -0.56
MET28	YIR017C	ENP2	P48234	707 aa	Known RBP	11.56	□□□□□ -0.56
MET28	YIR017C	MRPS35	P53292	345 aa		11.56	□□□□□ -0.56
MET28	YIR017C	SEN54	Q02825	467 aa	Predicted RBP	11.56	□□□□□ -0.56
MET28	YIR017C	ACK1	Q07622	623 aa	Predicted RBP	11.56	□□□□□ -0.56
MET28	YIR017C	ARG82	P07250	355 aa		11.55	□□□□□ -0.56
MET28	YIR017C	PTK1	P36002	662 aa	Predicted RBP	11.55	□□□□□ -0.56
MET28	YIR017C	MDL2	P33311	773 aa		11.54	□□□□□ -0.56
MET28	YIR017C	STM1	P39015	273 aa	Known RBP	11.54	□□□□□ -0.56
MET28	YIR017C	EPS1	P40557	701 aa		11.54	□□□□□ -0.56
MET28	YIR017C	GLC3	P32775	704 aa		11.53	□□□□□ -0.56
MET28	YIR017C	NPL4	P33755	580 aa		11.53	□□□□□ -0.56
MET28	YIR017C	GEF1	P37020	779 aa		11.53	□□□□□ -0.56
MET28	YIR017C	BOI1	P38041	980 aa	Known RBP	11.53	□□□□□ -0.56
MET28	YIR017C	PIB2	P53191	635 aa		11.53	□□□□□ -0.56
MET28	YIR017C	TRM44	Q02648	567 aa	Known RBP	11.53	□□□□□ -0.56
MET28	YIR017C	FPR4	Q06205	392 aa	Predicted RBP	11.53	□□□□□ -0.56
MET28	YIR017C	FIG2	P25653	1609 aa		11.53	□□□□□ -0.56
MET28	YIR017C	HKR1	P41809	1802 aa		11.52	□□□□□ -0.57
MET28	YIR017C	RPS7A	P26786	190 aa	Known RBP	11.52	□□□□□ -0.57
MET28	YIR017C	RTG2	P32608	588 aa	Known RBP	11.52	□□□□□ -0.57
MET28	YIR017C	PUS6	P53294	404 aa		11.52	□□□□□ -0.57
MET28	YIR017C	TIM50	Q02776	476 aa		11.52	□□□□□ -0.57
MET28	YIR017C	FAS2	P19097	1887 aa	Known RBP	11.52	□□□□□ -0.57
MET28	YIR017C	THS1	P04801	734 aa	Known RBP	11.51	□□□□□ -0.57
MET28	YIR017C	YMR147W	P40218	223 aa	Known RBP	11.51	□□□□□ -0.57
MET28	YIR017C	APL6	P46682	809 aa		11.51	□□□□□ -0.57
MET28	YIR017C	GCR2	Q01722	534 aa		11.51	□□□□□ -0.57
MET28	YIR017C	RIM20	Q12033	661 aa		11.51	□□□□□ -0.57
MET28	YIR017C	AIM7	Q12156	149 aa		11.51	□□□□□ -0.57
MET28	YIR017C	OPI1	P21957	404 aa		11.5	□□□□□ -0.57
MET28	YIR017C	GRX7	P38068	203 aa		11.5	□□□□□ -0.57
MET28	YIR017C	BRN1	P38170	754 aa		11.5	□□□□□ -0.57
MET28	YIR017C	FET4	P40988	552 aa		11.5	□□□□□ -0.57
MET28	YIR017C	IOC3	P43596	787 aa		11.5	□□□□□ -0.57
MET28	YIR017C	IRC8	P47046	822 aa		11.5	□□□□□ -0.57
MET28	YIR017C	PIP2	P52960	996 aa		11.5	□□□□□ -0.57
MET28	YIR017C	DUR1,2	P32528	1835 aa	Known RBP	11.49	□□□□□ -0.57
MET28	YIR017C	VPS4	P52917	437 aa		11.49	□□□□□ -0.57
MET28	YIR017C	TAH18	Q12181	623 aa		11.49	□□□□□ -0.57
MET28	YIR017C	TPM1	P17536	199 aa	Known RBP	11.48	□□□□□ -0.57
MET28	YIR017C	GAP1	P19145	602 aa	Predicted RBP	11.48	□□□□□ -0.57
MET28	YIR017C	YGR117C	P53270	476 aa		11.48	□□□□□ -0.57
MET28	YIR017C	YLR278C	Q05854	1341 aa		11.47	□□□□□ -0.57
MET28	YIR017C	SNF3	P10870	884 aa		11.47	□□□□□ -0.57
MET28	YIR017C	HPR1	P17629	752 aa	Known RBP	11.47	□□□□□ -0.57
MET28	YIR017C	DLD1	P32891	587 aa		11.47	□□□□□ -0.57
MET28	YIR017C	AAP1	P37898	856 aa	Known RBP	11.47	□□□□□ -0.57
MET28	YIR017C	BBC1	P47068	1157 aa		11.47	□□□□□ -0.57
MET28	YIR017C	FLO11	P08640	1367 aa		11.46	□□□□□ -0.57
MET28	YIR017C	PEX21	P50091	288 aa		11.46	□□□□□ -0.57
MET28	YIR017C	KAR5	Q04746	504 aa		11.46	□□□□□ -0.57
MET28	YIR017C	STV1	P37296	890 aa		11.45	□□□□□ -0.58
MET28	YIR017C	RRP8	P38961	392 aa	Known RBP	11.45	□□□□□ -0.58
MET28	YIR017C	PKH3	Q03306	898 aa	Predicted RBP	11.45	□□□□□ -0.58
MET28	YIR017C	MET1	P36150	593 aa		11.44	□□□□□ -0.58
MET28	YIR017C	EMP47	P43555	445 aa		11.44	□□□□□ -0.58
MET28	YIR017C	PUS5	Q06244	254 aa		11.44	□□□□□ -0.58
MET28	YIR017C	SLN1	P39928	1220 aa	Predicted RBP	11.43	□□□□□ -0.58
MET28	YIR017C	YJL171C	P46992	396 aa		11.43	□□□□□ -0.58
MET28	YIR017C	LAM4	P38800	1345 aa		11.42	□□□□□ -0.58
MET28	YIR017C	HXT13	P39924	564 aa		11.42	□□□□□ -0.58
MET28	YIR017C	HXT17	P53631	564 aa		11.42	□□□□□ -0.58
MET28	YIR017C	SSF2	Q12153	453 aa	Predicted RBP	11.42	□□□□□ -0.58
MET28	YIR017C	CBP1	P07252	654 aa		11.41	□□□□□ -0.58
MET28	YIR017C	UTP7	P40055	554 aa	Known RBP	11.41	□□□□□ -0.58
MET28	YIR017C	MTC3	P53077	123 aa		11.41	□□□□□ -0.58
MET28	YIR017C	YPL260W	Q08977	551 aa		11.41	□□□□□ -0.58
MET28	YIR017C	COQ1	P18900	473 aa		11.4	□□□□□ -0.58
MET28	YIR017C	RTS1	P38903	757 aa		11.4	□□□□□ -0.58
MET28	YIR017C	MRD1	Q06106	887 aa	Known RBP	11.4	□□□□□ -0.58
MET28	YIR017C	PPM2	Q08282	695 aa		11.4	□□□□□ -0.58
MET28	YIR017C	ISW2	Q08773	1120 aa		11.4	□□□□□ -0.58
MET28	YIR017C	PCL8	Q08966	492 aa		11.4	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms