RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W PRP43P53131 767 aaKnown RBP8.65□□□□□ -1.02
MSP1YGR028W SYH1Q02875 849 aaKnown RBP8.65□□□□□ -1.02
MSP1YGR028W ROM2P51862 1356 aaKnown RBP8.64□□□□□ -1.03
MSP1YGR028W YML133CQ03099 1374 aa8.64□□□□□ -1.03
MSP1YGR028W YLL067CQ07888 1374 aa8.64□□□□□ -1.03
MSP1YGR028W YLL066CQ99208 1374 aa8.64□□□□□ -1.03
MSP1YGR028W ENP1P38333 483 aaKnown RBP8.64□□□□□ -1.03
MSP1YGR028W YJL181WP46987 611 aa8.64□□□□□ -1.03
MSP1YGR028W COBP00163 385 aa8.63□□□□□ -1.03
MSP1YGR028W YKL133CP36066 463 aa8.63□□□□□ -1.03
MSP1YGR028W VAC17P25591 423 aa8.62□□□□□ -1.03
MSP1YGR028W YJL007CP47080 104 aa8.62□□□□□ -1.03
MSP1YGR028W URB1P34241 1764 aaKnown RBP8.62□□□□□ -1.03
MSP1YGR028W TEC1P18412 486 aa8.61□□□□□ -1.03
MSP1YGR028W KIP2P28743 706 aa8.61□□□□□ -1.03
MSP1YGR028W IXR1P33417 597 aa8.6□□□□□ -1.03
MSP1YGR028W FIG4P42837 879 aa8.6□□□□□ -1.03
MSP1YGR028W PUS5Q06244 254 aa8.6□□□□□ -1.03
MSP1YGR028W GAS4Q08271 471 aa8.6□□□□□ -1.03
MSP1YGR028W YRF1-4O13559 1382 aa8.6□□□□□ -1.03
MSP1YGR028W PRP40P33203 583 aaKnown RBP8.59□□□□□ -1.03
MSP1YGR028W YPP1P46951 817 aa8.59□□□□□ -1.03
MSP1YGR028W YEF3P16521 1044 aaKnown RBP8.58□□□□□ -1.04
MSP1YGR028W GUT2P32191 649 aa8.58□□□□□ -1.04
MSP1YGR028W YKR075CP36155 307 aa8.58□□□□□ -1.04
MSP1YGR028W UGA2P38067 497 aa8.58□□□□□ -1.04
MSP1YGR028W BIM1P40013 344 aa8.58□□□□□ -1.04
MSP1YGR028W CDC4P07834 779 aa8.57□□□□□ -1.04
MSP1YGR028W SUP45P12385 437 aaKnown RBP8.57□□□□□ -1.04
MSP1YGR028W BIO2P32451 375 aa8.57□□□□□ -1.04
MSP1YGR028W RPL34BP40525 121 aaKnown RBP8.57□□□□□ -1.04
MSP1YGR028W CTH1P47976 325 aa8.57□□□□□ -1.04
MSP1YGR028W ALD2P47771 506 aa8.56□□□□□ -1.04
MSP1YGR028W STE20Q03497 939 aaKnown RBP8.55□□□□□ -1.04
MSP1YGR028W FKS3Q04952 1785 aa8.54□□□□□ -1.04
MSP1YGR028W EDE1P34216 1381 aa8.54□□□□□ -1.04
MSP1YGR028W YDJ1P25491 409 aaKnown RBP8.53□□□□□ -1.04
MSP1YGR028W YNL108CP53929 270 aa8.53□□□□□ -1.04
MSP1YGR028W YPR084WQ06821 456 aa8.53□□□□□ -1.04
MSP1YGR028W FRA1Q07825 749 aa8.53□□□□□ -1.04
MSP1YGR028W TRK1P12685 1235 aa8.52□□□□□ -1.05
MSP1YGR028W MRT4P33201 236 aaKnown RBP8.52□□□□□ -1.05
MSP1YGR028W ATG32P40458 529 aa8.52□□□□□ -1.05
MSP1YGR028W ADE16P54113 591 aaKnown RBP8.52□□□□□ -1.05
MSP1YGR028W MCM16Q12262 181 aa8.52□□□□□ -1.05
MSP1YGR028W PDI1P17967 522 aaKnown RBP8.51□□□□□ -1.05
MSP1YGR028W TIF1P10081 395 aaKnown RBP8.5□□□□□ -1.05
MSP1YGR028W ATG3P40344 310 aa8.5□□□□□ -1.05
MSP1YGR028W CLA4P48562 842 aa8.5□□□□□ -1.05
MSP1YGR028W YIL177CP40434 1758 aa8.5□□□□□ -1.05
MSP1YGR028W YJL225CP40889 1758 aa8.5□□□□□ -1.05
MSP1YGR028W APC1P53886 1748 aa8.49□□□□□ -1.05
MSP1YGR028W SCT1P32784 759 aa8.49□□□□□ -1.05
MSP1YGR028W MEC3Q02574 474 aa8.49□□□□□ -1.05
MSP1YGR028W YRF1-3P0CX14 1859 aa8.49□□□□□ -1.05
MSP1YGR028W YRF1-7P0CX15 1859 aa8.49□□□□□ -1.05
MSP1YGR028W YRF1-6P53819 1859 aa8.49□□□□□ -1.05
MSP1YGR028W AUS1Q08409 1394 aa8.48□□□□□ -1.05
MSP1YGR028W ENO2P00925 437 aaKnown RBP8.48□□□□□ -1.05
MSP1YGR028W AIR1P40507 360 aaKnown RBP8.48□□□□□ -1.05
MSP1YGR028W EMW1P42842 904 aaKnown RBP8.48□□□□□ -1.05
MSP1YGR028W HST3P53687 447 aa8.48□□□□□ -1.05
MSP1YGR028W HIM1Q06674 414 aa8.48□□□□□ -1.05
MSP1YGR028W SIR4P11978 1358 aa8.48□□□□□ -1.05
MSP1YGR028W AFT1P22149 690 aa8.47□□□□□ -1.05
MSP1YGR028W RTG2P32608 588 aaKnown RBP8.47□□□□□ -1.05
MSP1YGR028W EMP47P43555 445 aa8.47□□□□□ -1.05
MSP1YGR028W MET32Q12041 191 aa8.47□□□□□ -1.05
MSP1YGR028W RLF2Q12495 606 aa8.47□□□□□ -1.05
MSP1YGR028W SSA1P10591 642 aaKnown RBP8.46□□□□□ -1.06
MSP1YGR028W SRC1Q03707 834 aa8.46□□□□□ -1.06
MSP1YGR028W RPO41P13433 1351 aaKnown RBP8.46□□□□□ -1.06
MSP1YGR028W ASH1P34233 588 aa8.45□□□□□ -1.06
MSP1YGR028W RIM21P48565 533 aa8.45□□□□□ -1.06
MSP1YGR028W UTP13Q05946 817 aaKnown RBP8.45□□□□□ -1.06
MSP1YGR028W ATG13Q06628 738 aa8.45□□□□□ -1.06
MSP1YGR028W GCR2Q01722 534 aa8.44□□□□□ -1.06
MSP1YGR028W SEC3P33332 1336 aaKnown RBP8.44□□□□□ -1.06
MSP1YGR028W SIS2P36024 562 aa8.43□□□□□ -1.06
MSP1YGR028W TAP42Q04372 366 aa8.43□□□□□ -1.06
MSP1YGR028W GRX4P32642 244 aa8.42□□□□□ -1.06
MSP1YGR028W ALD3P54114 506 aa8.42□□□□□ -1.06
MSP1YGR028W INP54Q08227 384 aaKnown RBP8.42□□□□□ -1.06
MSP1YGR028W SPT7P35177 1332 aa8.41□□□□□ -1.06
MSP1YGR028W ISF1P32488 338 aa8.41□□□□□ -1.06
MSP1YGR028W APL6P46682 809 aa8.41□□□□□ -1.06
MSP1YGR028W PDS5Q04264 1277 aa8.41□□□□□ -1.06
MSP1YGR028W MRX10Q05648 414 aa8.41□□□□□ -1.06
MSP1YGR028W KAR2P16474 682 aaKnown RBP8.4□□□□□ -1.06
MSP1YGR028W OSM1P21375 501 aaKnown RBP8.4□□□□□ -1.06
MSP1YGR028W UGA3P26370 528 aa8.4□□□□□ -1.06
MSP1YGR028W ATG20Q07528 640 aa8.4□□□□□ -1.06
MSP1YGR028W YPR204WQ08995 1032 aa8.4□□□□□ -1.06
MSP1YGR028W MKS1P34072 584 aa8.39□□□□□ -1.07
MSP1YGR028W EAF6P47128 113 aa8.39□□□□□ -1.07
MSP1YGR028W BUG1Q12191 341 aa8.39□□□□□ -1.07
MSP1YGR028W ENO1P00924 437 aaKnown RBP8.38□□□□□ -1.07
MSP1YGR028W RPP2BP02400 110 aaKnown RBP8.38□□□□□ -1.07
MSP1YGR028W BRE2P43132 505 aa8.38□□□□□ -1.07
MSP1YGR028W MHP1P43638 1398 aa8.37□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms