RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W ADR1P07248 1323 aa8.17□□□□□ -1.1
NUP49YGL172W SET4P42948 560 aa8.17□□□□□ -1.1
NUP49YGL172W BDP1P46678 594 aa8.17□□□□□ -1.1
NUP49YGL172W AI2P03876 854 aa8.16□□□□□ -1.1
NUP49YGL172W SHC1P39000 512 aa8.16□□□□□ -1.1
NUP49YGL172W POM152P39685 1337 aa8.15□□□□□ -1.1
NUP49YGL172W TIF4632P39936 914 aaKnown RBP8.15□□□□□ -1.1
NUP49YGL172W IRC4Q03036 179 aa8.15□□□□□ -1.1
NUP49YGL172W UBX2Q04228 584 aa8.15□□□□□ -1.1
NUP49YGL172W RFC1P38630 861 aaKnown RBP8.14□□□□□ -1.11
NUP49YGL172W GSM1P42950 618 aa8.14□□□□□ -1.11
NUP49YGL172W FPK1P53739 893 aa8.14□□□□□ -1.11
NUP49YGL172W YNL193WP53870 558 aa8.14□□□□□ -1.11
NUP49YGL172W DPL1Q05567 589 aa8.14□□□□□ -1.11
NUP49YGL172W RPN7Q06103 429 aaKnown RBP8.14□□□□□ -1.11
NUP49YGL172W ATG20Q07528 640 aa8.14□□□□□ -1.11
NUP49YGL172W RRI2Q12348 645 aa8.14□□□□□ -1.11
NUP49YGL172W RPS9BP05755 195 aaKnown RBP8.13□□□□□ -1.11
NUP49YGL172W LCB1P25045 558 aaKnown RBP8.13□□□□□ -1.11
NUP49YGL172W SLI15P38283 698 aa8.13□□□□□ -1.11
NUP49YGL172W NUG1P40010 520 aaKnown RBP8.13□□□□□ -1.11
NUP49YGL172W YGL242CP53066 181 aa8.13□□□□□ -1.11
NUP49YGL172W GAS5Q08193 484 aa8.13□□□□□ -1.11
NUP49YGL172W HKR1P41809 1802 aa8.13□□□□□ -1.11
NUP49YGL172W PDR18P53756 1333 aa8.13□□□□□ -1.11
NUP49YGL172W KTR3P38130 404 aaPredicted RBP8.12□□□□□ -1.11
NUP49YGL172W TOS4Q06266 489 aa8.12□□□□□ -1.11
NUP49YGL172W FAS2P19097 1887 aaKnown RBP8.12□□□□□ -1.11
NUP49YGL172W NOT3P06102 836 aaKnown RBP8.12□□□□□ -1.11
NUP49YGL172W NKP2Q06162 153 aa8.12□□□□□ -1.11
NUP49YGL172W DUR1,2P32528 1835 aaKnown RBP8.11□□□□□ -1.11
NUP49YGL172W FIG2P25653 1609 aa8.11□□□□□ -1.11
NUP49YGL172W MSM1P22438 575 aa8.11□□□□□ -1.11
NUP49YGL172W RPT3P33298 428 aaKnown RBP8.11□□□□□ -1.11
NUP49YGL172W ECM21P38167 1117 aaKnown RBP8.11□□□□□ -1.11
NUP49YGL172W GLO3P38682 493 aaKnown RBP8.11□□□□□ -1.11
NUP49YGL172W HAL5P38970 855 aaKnown RBP8.11□□□□□ -1.11
NUP49YGL172W YIR042CP40586 236 aa8.11□□□□□ -1.11
NUP49YGL172W MLC1P53141 149 aa8.11□□□□□ -1.11
NUP49YGL172W RMD1Q03441 430 aa8.11□□□□□ -1.11
NUP49YGL172W PRP42Q03776 544 aaKnown RBP8.11□□□□□ -1.11
NUP49YGL172W RRG1Q12167 365 aaPredicted RBP8.11□□□□□ -1.11
NUP49YGL172W AFG2P32794 780 aa8.1□□□□□ -1.11
NUP49YGL172W JJJ2P46997 583 aa8.1□□□□□ -1.11
NUP49YGL172W VPS70P47161 811 aa8.1□□□□□ -1.11
NUP49YGL172W ALO1P54783 526 aaKnown RBP8.1□□□□□ -1.11
NUP49YGL172W YPR148CQ06523 435 aa8.1□□□□□ -1.11
NUP49YGL172W THS1P04801 734 aaKnown RBP8.09□□□□□ -1.11
NUP49YGL172W PIF1P07271 859 aa8.09□□□□□ -1.11
NUP49YGL172W GAP1P19145 602 aaPredicted RBP8.09□□□□□ -1.11
NUP49YGL172W RRD1P40454 393 aaKnown RBP8.09□□□□□ -1.11
NUP49YGL172W ECM16Q04217 1267 aaKnown RBP8.09□□□□□ -1.11
NUP49YGL172W INM2Q05533 292 aa8.09□□□□□ -1.11
NUP49YGL172W PSF3Q12146 194 aa8.09□□□□□ -1.11
NUP49YGL172W CDC16P09798 840 aa8.08□□□□□ -1.12
NUP49YGL172W TRM44Q02648 567 aaKnown RBP8.08□□□□□ -1.12
NUP49YGL172W WRS1Q12109 432 aaKnown RBP8.08□□□□□ -1.12
NUP49YGL172W ARG82P07250 355 aa8.07□□□□□ -1.12
NUP49YGL172W RPS7AP26786 190 aaKnown RBP8.07□□□□□ -1.12
NUP49YGL172W FET4P40988 552 aa8.07□□□□□ -1.12
NUP49YGL172W YFH7P43591 353 aa8.07□□□□□ -1.12
NUP49YGL172W VPS4P52917 437 aa8.07□□□□□ -1.12
NUP49YGL172W SEN54Q02825 467 aaPredicted RBP8.07□□□□□ -1.12
NUP49YGL172W FLO11P08640 1367 aa8.06□□□□□ -1.12
NUP49YGL172W SIS1P25294 352 aaKnown RBP8.06□□□□□ -1.12
NUP49YGL172W RAM2P29703 316 aa8.06□□□□□ -1.12
NUP49YGL172W RTG2P32608 588 aaKnown RBP8.06□□□□□ -1.12
NUP49YGL172W PTK1P36002 662 aaPredicted RBP8.06□□□□□ -1.12
NUP49YGL172W STV1P37296 890 aa8.06□□□□□ -1.12
NUP49YGL172W PBY1P38254 753 aa8.06□□□□□ -1.12
NUP49YGL172W EPS1P40557 701 aa8.06□□□□□ -1.12
NUP49YGL172W MRPS35P53292 345 aa8.06□□□□□ -1.12
NUP49YGL172W CRF1Q04930 467 aa8.06□□□□□ -1.12
NUP49YGL172W GLC3P32775 704 aa8.05□□□□□ -1.12
NUP49YGL172W PIB2P53191 635 aa8.05□□□□□ -1.12
NUP49YGL172W TIM50Q02776 476 aa8.05□□□□□ -1.12
NUP49YGL172W PUS5Q06244 254 aa8.05□□□□□ -1.12
NUP49YGL172W BRE1Q07457 700 aaKnown RBP8.05□□□□□ -1.12
NUP49YGL172W AIM7Q12156 149 aa8.05□□□□□ -1.12
NUP49YGL172W YLR278CQ05854 1341 aa8.05□□□□□ -1.12
NUP49YGL172W MDL2P33311 773 aa8.04□□□□□ -1.12
NUP49YGL172W YMR147WP40218 223 aaKnown RBP8.04□□□□□ -1.12
NUP49YGL172W TGL3P40308 642 aa8.04□□□□□ -1.12
NUP49YGL172W RAD50P12753 1312 aa8.04□□□□□ -1.12
NUP49YGL172W HPR1P17629 752 aaKnown RBP8.03□□□□□ -1.12
NUP49YGL172W GRX7P38068 203 aa8.03□□□□□ -1.12
NUP49YGL172W PUS6P53294 404 aa8.03□□□□□ -1.12
NUP49YGL172W ACK1Q07622 623 aaPredicted RBP8.03□□□□□ -1.12
NUP49YGL172W VAS1P07806 1104 aaKnown RBP8.03□□□□□ -1.12
NUP49YGL172W KTR1P27810 393 aaKnown RBP8.03□□□□□ -1.12
NUP49YGL172W YGR117CP53270 476 aa8.03□□□□□ -1.12
NUP49YGL172W CYB2P00175 591 aa8.02□□□□□ -1.13
NUP49YGL172W SNF3P10870 884 aa8.02□□□□□ -1.13
NUP49YGL172W BOI1P38041 980 aaKnown RBP8.02□□□□□ -1.13
NUP49YGL172W STM1P39015 273 aaKnown RBP8.02□□□□□ -1.13
NUP49YGL172W APL6P46682 809 aa8.02□□□□□ -1.13
NUP49YGL172W SSA4P22202 642 aaKnown RBP8.01□□□□□ -1.13
NUP49YGL172W OSH3P38713 996 aaKnown RBP8.01□□□□□ -1.13
NUP49YGL172W PEX21P50091 288 aa8.01□□□□□ -1.13
NUP49YGL172W RIM20Q12033 661 aa8.01□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms