RNA–Protein interactions for RNA: YFR024C-A

LSB3, Transcript of Protein containing a C-terminal SH3 domain, yeast

Gene LSB3, Length 1,380 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSB3	YFR024C-A	IRC4	Q03036	179 aa		11.24	□□□□□ -0.61
LSB3	YFR024C-A	GYP5	Q12344	894 aa		11.24	□□□□□ -0.61
LSB3	YFR024C-A	TRM44	Q02648	567 aa	Known RBP	11.23	□□□□□ -0.61
LSB3	YFR024C-A	PRP42	Q03776	544 aa	Known RBP	11.23	□□□□□ -0.61
LSB3	YFR024C-A	GAP1	P19145	602 aa	Predicted RBP	11.22	□□□□□ -0.61
LSB3	YFR024C-A	LCB1	P25045	558 aa	Known RBP	11.22	□□□□□ -0.61
LSB3	YFR024C-A	POL32	P47110	350 aa		11.22	□□□□□ -0.61
LSB3	YFR024C-A	PUF6	Q04373	656 aa	Known RBP	11.22	□□□□□ -0.61
LSB3	YFR024C-A	ILV3	P39522	585 aa	Known RBP	11.21	□□□□□ -0.61
LSB3	YFR024C-A	GSM1	P42950	618 aa		11.21	□□□□□ -0.61
LSB3	YFR024C-A	AIM7	Q12156	149 aa		11.21	□□□□□ -0.61
LSB3	YFR024C-A	NCB2	Q92317	146 aa		11.21	□□□□□ -0.61
LSB3	YFR024C-A	SEC18	P18759	758 aa	Known RBP	11.2	□□□□□ -0.62
LSB3	YFR024C-A	JJJ2	P46997	583 aa		11.2	□□□□□ -0.62
LSB3	YFR024C-A	SLA1	P32790	1244 aa		11.19	□□□□□ -0.62
LSB3	YFR024C-A	VPS4	P52917	437 aa		11.19	□□□□□ -0.62
LSB3	YFR024C-A	YGR117C	P53270	476 aa		11.19	□□□□□ -0.62
LSB3	YFR024C-A	FLO11	P08640	1367 aa		11.19	□□□□□ -0.62
LSB3	YFR024C-A	ARG82	P07250	355 aa		11.18	□□□□□ -0.62
LSB3	YFR024C-A	VHR2	P40041	505 aa		11.18	□□□□□ -0.62
LSB3	YFR024C-A	EMP47	P43555	445 aa		11.18	□□□□□ -0.62
LSB3	YFR024C-A	SEN54	Q02825	467 aa	Predicted RBP	11.18	□□□□□ -0.62
LSB3	YFR024C-A	TOS4	Q06266	489 aa		11.18	□□□□□ -0.62
LSB3	YFR024C-A	ACK1	Q07622	623 aa	Predicted RBP	11.18	□□□□□ -0.62
LSB3	YFR024C-A	WRS1	Q12109	432 aa	Known RBP	11.18	□□□□□ -0.62
LSB3	YFR024C-A	PIF1	P07271	859 aa		11.17	□□□□□ -0.62
LSB3	YFR024C-A	STV1	P37296	890 aa		11.17	□□□□□ -0.62
LSB3	YFR024C-A	RRI2	Q12348	645 aa		11.17	□□□□□ -0.62
LSB3	YFR024C-A	GLO3	P38682	493 aa	Known RBP	11.16	□□□□□ -0.62
LSB3	YFR024C-A	NMD2	P38798	1089 aa	Known RBP	11.16	□□□□□ -0.62
LSB3	YFR024C-A	HPR1	P17629	752 aa	Known RBP	11.16	□□□□□ -0.62
LSB3	YFR024C-A	YFH7	P43591	353 aa		11.16	□□□□□ -0.62
LSB3	YFR024C-A	YNL193W	P53870	558 aa		11.16	□□□□□ -0.62
LSB3	YFR024C-A	AI2	P03876	854 aa		11.15	□□□□□ -0.63
LSB3	YFR024C-A	RPS7A	P26786	190 aa	Known RBP	11.15	□□□□□ -0.63
LSB3	YFR024C-A	PEA2	P40091	420 aa		11.14	□□□□□ -0.63
LSB3	YFR024C-A	RPN7	Q06103	429 aa	Known RBP	11.14	□□□□□ -0.63
LSB3	YFR024C-A	HAL5	P38970	855 aa	Known RBP	11.13	□□□□□ -0.63
LSB3	YFR024C-A	RPT3	P33298	428 aa	Known RBP	11.12	□□□□□ -0.63
LSB3	YFR024C-A	YIR042C	P40586	236 aa		11.12	□□□□□ -0.63
LSB3	YFR024C-A	BDP1	P46678	594 aa		11.12	□□□□□ -0.63
LSB3	YFR024C-A	YGL242C	P53066	181 aa		11.12	□□□□□ -0.63
LSB3	YFR024C-A	INM2	Q05533	292 aa		11.12	□□□□□ -0.63
LSB3	YFR024C-A	RRD1	P40454	393 aa	Known RBP	11.11	□□□□□ -0.63
LSB3	YFR024C-A	YIL089W	P40500	205 aa		11.11	□□□□□ -0.63
LSB3	YFR024C-A	MLC1	P53141	149 aa		11.11	□□□□□ -0.63
LSB3	YFR024C-A	CWC15	Q03772	175 aa	Known RBP	11.11	□□□□□ -0.63
LSB3	YFR024C-A	PDR18	P53756	1333 aa		11.1	□□□□□ -0.63
LSB3	YFR024C-A	FPR3	P38911	411 aa	Known RBP	11.1	□□□□□ -0.63
LSB3	YFR024C-A	UTP7	P40055	554 aa	Known RBP	11.1	□□□□□ -0.63
LSB3	YFR024C-A	PUS6	P53294	404 aa		11.1	□□□□□ -0.63
LSB3	YFR024C-A	NOT3	P06102	836 aa	Known RBP	11.09	□□□□□ -0.63
LSB3	YFR024C-A	CBP1	P07252	654 aa		11.09	□□□□□ -0.63
LSB3	YFR024C-A	PTK1	P36002	662 aa	Predicted RBP	11.09	□□□□□ -0.63
LSB3	YFR024C-A	APL6	P46682	809 aa		11.09	□□□□□ -0.63
LSB3	YFR024C-A	YJL171C	P46992	396 aa		11.09	□□□□□ -0.63
LSB3	YFR024C-A	TYW1	Q08960	810 aa	Known RBP	11.09	□□□□□ -0.63
LSB3	YFR024C-A	SNF3	P10870	884 aa		11.08	□□□□□ -0.64
LSB3	YFR024C-A	KTR3	P38130	404 aa	Predicted RBP	11.08	□□□□□ -0.64
LSB3	YFR024C-A	ECM21	P38167	1117 aa	Known RBP	11.08	□□□□□ -0.64
LSB3	YFR024C-A	MTC3	P53077	123 aa		11.08	□□□□□ -0.64
LSB3	YFR024C-A	CYB2	P00175	591 aa		11.07	□□□□□ -0.64
LSB3	YFR024C-A	MDL2	P33311	773 aa		11.07	□□□□□ -0.64
LSB3	YFR024C-A	GEF1	P37020	779 aa		11.05	□□□□□ -0.64
LSB3	YFR024C-A	BOI1	P38041	980 aa	Known RBP	11.05	□□□□□ -0.64
LSB3	YFR024C-A	ALO1	P54783	526 aa	Known RBP	11.05	□□□□□ -0.64
LSB3	YFR024C-A	ECM16	Q04217	1267 aa	Known RBP	11.05	□□□□□ -0.64
LSB3	YFR024C-A	FLO1	P32768	1537 aa		11.05	□□□□□ -0.64
LSB3	YFR024C-A	CDC16	P09798	840 aa		11.04	□□□□□ -0.64
LSB3	YFR024C-A	YKR023W	P36119	530 aa	Known RBP	11.04	□□□□□ -0.64
LSB3	YFR024C-A	ETP1	P38748	585 aa	Known RBP	11.04	□□□□□ -0.64
LSB3	YFR024C-A	NIT1	P40447	199 aa		11.04	□□□□□ -0.64
LSB3	YFR024C-A	EPS1	P40557	701 aa		11.04	□□□□□ -0.64
LSB3	YFR024C-A	GAL2	P13181	574 aa		11.03	□□□□□ -0.64
LSB3	YFR024C-A	NPL4	P33755	580 aa		11.03	□□□□□ -0.64
LSB3	YFR024C-A	GSC2	P40989	1895 aa		11.03	□□□□□ -0.64
LSB3	YFR024C-A	RRT6	P53117	311 aa	Predicted RBP	11.03	□□□□□ -0.64
LSB3	YFR024C-A	RFC1	P38630	861 aa	Known RBP	11.03	□□□□□ -0.64
LSB3	YFR024C-A	PIP2	P52960	996 aa		11.03	□□□□□ -0.64
LSB3	YFR024C-A	CSR2	Q12734	1121 aa		11.03	□□□□□ -0.64
LSB3	YFR024C-A	GRX7	P38068	203 aa		11.02	□□□□□ -0.65
LSB3	YFR024C-A	OSH3	P38713	996 aa	Known RBP	11.02	□□□□□ -0.65
LSB3	YFR024C-A	BRE1	Q07457	700 aa	Known RBP	11.02	□□□□□ -0.65
LSB3	YFR024C-A	ENP2	P48234	707 aa	Known RBP	11.01	□□□□□ -0.65
LSB3	YFR024C-A	PBY1	P38254	753 aa		11	□□□□□ -0.65
LSB3	YFR024C-A	BSD2	P38356	321 aa		11	□□□□□ -0.65
LSB3	YFR024C-A	NOP2	P40991	618 aa	Known RBP	11	□□□□□ -0.65
LSB3	YFR024C-A	NKP2	Q06162	153 aa		11	□□□□□ -0.65
LSB3	YFR024C-A	RIM101	P33400	625 aa		10.99	□□□□□ -0.65
LSB3	YFR024C-A	YMR147W	P40218	223 aa	Known RBP	10.99	□□□□□ -0.65
LSB3	YFR024C-A	MSH4	P40965	878 aa	Predicted RBP	10.99	□□□□□ -0.65
LSB3	YFR024C-A	IOC3	P43596	787 aa		10.99	□□□□□ -0.65
LSB3	YFR024C-A	RAD53	P22216	821 aa		10.98	□□□□□ -0.65
LSB3	YFR024C-A	IRC8	P47046	822 aa		10.98	□□□□□ -0.65
LSB3	YFR024C-A	MRPS35	P53292	345 aa		10.98	□□□□□ -0.65
LSB3	YFR024C-A	NSG2	P53898	299 aa		10.98	□□□□□ -0.65
LSB3	YFR024C-A	PCL8	Q08966	492 aa		10.98	□□□□□ -0.65
LSB3	YFR024C-A	PMA1	P05030	918 aa	Known RBP	10.97	□□□□□ -0.65
LSB3	YFR024C-A	ADP1	P25371	1049 aa		10.97	□□□□□ -0.65
LSB3	YFR024C-A	PNT1	P38969	423 aa		10.97	□□□□□ -0.65

Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms