RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W ESC2Q06340 456 aa5.86□□□□□ -1.47
CDC4YFL009W NOP14Q99207 810 aaKnown RBP5.86□□□□□ -1.47
CDC4YFL009W RTC1Q08281 1341 aa5.86□□□□□ -1.47
CDC4YFL009W GAL2P13181 574 aa5.86□□□□□ -1.47
CDC4YFL009W DAL5P15365 543 aa5.86□□□□□ -1.47
CDC4YFL009W SRP54P20424 541 aaKnown RBP5.86□□□□□ -1.47
CDC4YFL009W ESL2P36168 1195 aa5.86□□□□□ -1.47
CDC4YFL009W BNI4P53858 892 aa5.86□□□□□ -1.47
CDC4YFL009W TBF1Q02457 562 aa5.86□□□□□ -1.47
CDC4YFL009W UBP9P39967 754 aa5.85□□□□□ -1.47
CDC4YFL009W POL32P47110 350 aa5.85□□□□□ -1.47
CDC4YFL009W VPS60Q03390 229 aa5.85□□□□□ -1.47
CDC4YFL009W LCD1Q04377 747 aa5.85□□□□□ -1.47
CDC4YFL009W BUD3P25558 1636 aa5.85□□□□□ -1.47
CDC4YFL009W DNF2Q12675 1612 aa5.85□□□□□ -1.47
CDC4YFL009W GCD11P32481 527 aaKnown RBP5.85□□□□□ -1.47
CDC4YFL009W YEF3P16521 1044 aaKnown RBP5.84□□□□□ -1.47
CDC4YFL009W NPL4P33755 580 aa5.84□□□□□ -1.47
CDC4YFL009W SAP30P38429 201 aa5.84□□□□□ -1.47
CDC4YFL009W ITC1P53125 1264 aa5.84□□□□□ -1.47
CDC4YFL009W YNL011CP53980 444 aa5.84□□□□□ -1.47
CDC4YFL009W PRP3Q03338 469 aaPredicted RBP5.84□□□□□ -1.47
CDC4YFL009W CWC15Q03772 175 aaKnown RBP5.84□□□□□ -1.47
CDC4YFL009W RAV1P47104 1357 aa5.84□□□□□ -1.47
CDC4YFL009W TEC1P18412 486 aa5.83□□□□□ -1.48
CDC4YFL009W YIL092WP40497 633 aa5.83□□□□□ -1.48
CDC4YFL009W DSN1P40568 576 aa5.83□□□□□ -1.48
CDC4YFL009W DRS2P39524 1355 aa5.83□□□□□ -1.48
CDC4YFL009W TRL1P09880 827 aaKnown RBP5.83□□□□□ -1.48
CDC4YFL009W LTV1P34078 463 aa5.83□□□□□ -1.48
CDC4YFL009W SIC1P38634 284 aa5.83□□□□□ -1.48
CDC4YFL009W SAP155P43612 1002 aa5.83□□□□□ -1.48
CDC4YFL009W ROM1P53046 1155 aa5.83□□□□□ -1.48
CDC4YFL009W TAN1P53072 289 aaPredicted RBP5.83□□□□□ -1.48
CDC4YFL009W RSC1P53236 928 aa5.83□□□□□ -1.48
CDC4YFL009W RNT1Q02555 471 aa5.83□□□□□ -1.48
CDC4YFL009W COG8Q04632 607 aa5.83□□□□□ -1.48
CDC4YFL009W YSP2Q06681 1438 aa5.82□□□□□ -1.48
CDC4YFL009W SPE2P21182 396 aa5.82□□□□□ -1.48
CDC4YFL009W UBX7P38349 436 aa5.82□□□□□ -1.48
CDC4YFL009W MDG1P53885 366 aa5.82□□□□□ -1.48
CDC4YFL009W HOS3Q02959 697 aaKnown RBP5.82□□□□□ -1.48
CDC4YFL009W MET5P47169 1442 aa5.82□□□□□ -1.48
CDC4YFL009W MOD5P07884 428 aa5.82□□□□□ -1.48
CDC4YFL009W ACS2P52910 683 aaKnown RBP5.82□□□□□ -1.48
CDC4YFL009W SWI3P32591 825 aa5.81□□□□□ -1.48
CDC4YFL009W MED8P38304 223 aa5.81□□□□□ -1.48
CDC4YFL009W HAL5P38970 855 aaKnown RBP5.81□□□□□ -1.48
CDC4YFL009W AIR2Q12476 344 aaKnown RBP5.81□□□□□ -1.48
CDC4YFL009W YOR093CQ12275 1648 aa5.81□□□□□ -1.48
CDC4YFL009W ERP5P38819 212 aa5.81□□□□□ -1.48
CDC4YFL009W IPL1P38991 367 aa5.81□□□□□ -1.48
CDC4YFL009W STU2P46675 888 aa5.81□□□□□ -1.48
CDC4YFL009W PUF6Q04373 656 aaKnown RBP5.81□□□□□ -1.48
CDC4YFL009W ITT1Q04638 464 aa5.81□□□□□ -1.48
CDC4YFL009W CDC25P04821 1589 aa5.8□□□□□ -1.48
CDC4YFL009W SRS2P12954 1174 aa5.8□□□□□ -1.48
CDC4YFL009W VAC17P25591 423 aa5.8□□□□□ -1.48
CDC4YFL009W RTR1P40084 226 aaPredicted RBP5.8□□□□□ -1.48
CDC4YFL009W RRN7P40992 514 aa5.8□□□□□ -1.48
CDC4YFL009W BUD27P43573 796 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
CDC4YFL009W ALR1Q08269 859 aa5.8□□□□□ -1.48
CDC4YFL009W PDR11P40550 1411 aa5.8□□□□□ -1.48
CDC4YFL009W MCM2P29469 868 aa5.8□□□□□ -1.48
CDC4YFL009W TPD3P31383 635 aa5.8□□□□□ -1.48
CDC4YFL009W DEP1P31385 405 aa5.8□□□□□ -1.48
CDC4YFL009W RRP46P53256 223 aaPredicted RBP5.8□□□□□ -1.48
CDC4YFL009W VPS72Q03388 795 aa5.8□□□□□ -1.48
CDC4YFL009W STE20Q03497 939 aaKnown RBP5.8□□□□□ -1.48
CDC4YFL009W YEL077CQ3E7X8 1277 aa5.8□□□□□ -1.48
CDC4YFL009W YBL113CQ7M4S9 792 aa5.8□□□□□ -1.48
CDC4YFL009W PHO87P25360 923 aa5.79□□□□□ -1.48
CDC4YFL009W GUT2P32191 649 aa5.79□□□□□ -1.48
CDC4YFL009W RKM3P38222 552 aa5.79□□□□□ -1.48
CDC4YFL009W SOH1P38633 127 aa5.79□□□□□ -1.48
CDC4YFL009W ECM1P39715 212 aa5.79□□□□□ -1.48
CDC4YFL009W HXT10P43581 546 aa5.79□□□□□ -1.48
CDC4YFL009W ENV9Q08651 330 aa5.79□□□□□ -1.48
CDC4YFL009W BMS1Q08965 1183 aaKnown RBP5.79□□□□□ -1.48
CDC4YFL009W YRF1-4O13559 1382 aa5.79□□□□□ -1.48
CDC4YFL009W YML133CQ03099 1374 aa5.79□□□□□ -1.48
CDC4YFL009W YLL067CQ07888 1374 aa5.79□□□□□ -1.48
CDC4YFL009W YLL066CQ99208 1374 aa5.79□□□□□ -1.48
CDC4YFL009W SPO14P36126 1683 aa5.79□□□□□ -1.48
CDC4YFL009W PRT1P06103 763 aaKnown RBP5.79□□□□□ -1.48
CDC4YFL009W CLB1P24868 471 aa5.79□□□□□ -1.48
CDC4YFL009W MSH3P25336 1018 aa5.79□□□□□ -1.48
CDC4YFL009W PAM1P37304 830 aaKnown RBP5.79□□□□□ -1.48
CDC4YFL009W BOL3P39724 118 aa5.79□□□□□ -1.48
CDC4YFL009W MDJ2P42834 146 aa5.79□□□□□ -1.48
CDC4YFL009W NNF2P53253 936 aa5.79□□□□□ -1.48
CDC4YFL009W UTP13Q05946 817 aaKnown RBP5.79□□□□□ -1.48
CDC4YFL009W RRP15Q06511 250 aaPredicted RBP5.79□□□□□ -1.48
CDC4YFL009W SLD2P34252 453 aa5.78□□□□□ -1.48
CDC4YFL009W RRD1P40454 393 aaKnown RBP5.78□□□□□ -1.48
CDC4YFL009W TFG1P41895 735 aaPredicted RBP5.78□□□□□ -1.48
CDC4YFL009W YOL087CQ99247 1116 aa5.78□□□□□ -1.48
CDC4YFL009W DOP1Q03921 1698 aa5.78□□□□□ -1.48
CDC4YFL009W CBF5P33322 483 aaKnown RBP RIP-Chip data5.77□□□□□ -1.49not detected
CDC4YFL009W MET10P39692 1035 aa5.77□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms