RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W TRS33Q99394 268 aa6.77□□□□□ -1.33
PRE1YER012W SLN1P39928 1220 aaPredicted RBP6.76□□□□□ -1.33
PRE1YER012W CCT8P47079 568 aaKnown RBP6.76□□□□□ -1.33
PRE1YER012W CWH41P53008 833 aa6.76□□□□□ -1.33
PRE1YER012W YCK2P23292 546 aaKnown RBP6.75□□□□□ -1.33
PRE1YER012W PRK1P40494 810 aa6.75□□□□□ -1.33
PRE1YER012W NCL1P38205 684 aaKnown RBP6.74□□□□□ -1.33
PRE1YER012W YBR197CP38306 217 aa6.74□□□□□ -1.33
PRE1YER012W MCX1P38323 520 aaPredicted RBP6.74□□□□□ -1.33
PRE1YER012W SKP1P52286 194 aa6.74□□□□□ -1.33
PRE1YER012W NOB1Q08444 459 aaKnown RBP6.74□□□□□ -1.33
PRE1YER012W RPC31P17890 251 aa6.73□□□□□ -1.33
PRE1YER012W VMA3P25515 160 aa6.73□□□□□ -1.33
PRE1YER012W SKN7P38889 622 aa6.73□□□□□ -1.33
PRE1YER012W ALD4P46367 519 aaKnown RBP6.73□□□□□ -1.33
PRE1YER012W PUN1Q06991 263 aa6.73□□□□□ -1.33
PRE1YER012W MCA1Q08601 432 aa6.72□□□□□ -1.33
PRE1YER012W YDR215CQ12240 137 aa6.72□□□□□ -1.33
PRE1YER012W MRP10O75012 95 aa6.71□□□□□ -1.34
PRE1YER012W RPP1AP05318 106 aaPredicted RBP6.71□□□□□ -1.34
PRE1YER012W MRPL33P20084 86 aa6.71□□□□□ -1.34
PRE1YER012W ISC10P32645 267 aa6.71□□□□□ -1.34
PRE1YER012W MET1P36150 593 aa6.71□□□□□ -1.34
PRE1YER012W PGM2P37012 569 aaKnown RBP6.71□□□□□ -1.34
PRE1YER012W APM2P38700 605 aa6.71□□□□□ -1.34
PRE1YER012W PRY1P47032 299 aa6.71□□□□□ -1.34
PRE1YER012W HEH2Q03281 663 aa6.71□□□□□ -1.34
PRE1YER012W BSD2P38356 321 aa6.7□□□□□ -1.34
PRE1YER012W SSA4P22202 642 aaKnown RBP6.69□□□□□ -1.34
PRE1YER012W ALG14P38242 237 aa6.69□□□□□ -1.34
PRE1YER012W ITC1P53125 1264 aa6.69□□□□□ -1.34
PRE1YER012W NAR1P23503 491 aaKnown RBP6.67□□□□□ -1.34
PRE1YER012W TPS3P38426 1054 aaKnown RBP6.67□□□□□ -1.34
PRE1YER012W IDI1P15496 288 aa6.66□□□□□ -1.34
PRE1YER012W YOR296WQ08748 1289 aa6.65□□□□□ -1.34
PRE1YER012W NHA1Q99271 985 aa6.65□□□□□ -1.34
PRE1YER012W TAT1P38085 619 aa6.64□□□□□ -1.35
PRE1YER012W LDH1P38139 375 aa6.64□□□□□ -1.35
PRE1YER012W DYS1P38791 387 aa6.64□□□□□ -1.35
PRE1YER012W PUF6Q04373 656 aaKnown RBP6.64□□□□□ -1.35
PRE1YER012W GAS5Q08193 484 aa6.64□□□□□ -1.35
PRE1YER012W SBP1P10080 294 aaKnown RBP6.63□□□□□ -1.35
PRE1YER012W SRS2P12954 1174 aa6.63□□□□□ -1.35
PRE1YER012W CWC15Q03772 175 aaKnown RBP6.63□□□□□ -1.35
PRE1YER012W GIS4Q04233 774 aa6.63□□□□□ -1.35
PRE1YER012W GIP1P38229 639 aa6.62□□□□□ -1.35
PRE1YER012W AMN1P38285 549 aaPredicted RBP6.62□□□□□ -1.35
PRE1YER012W MSN1P22148 382 aa6.61□□□□□ -1.35
PRE1YER012W YJL181WP46987 611 aa6.61□□□□□ -1.35
PRE1YER012W PNP1Q05788 311 aa6.61□□□□□ -1.35
PRE1YER012W BOI1P38041 980 aaKnown RBP6.6□□□□□ -1.35
PRE1YER012W LSB6P42951 607 aa6.6□□□□□ -1.35
PRE1YER012W BUD9P53226 547 aa6.6□□□□□ -1.35
PRE1YER012W SUT1P53032 299 aaKnown RBP6.59□□□□□ -1.35
PRE1YER012W SUB2Q07478 446 aaKnown RBP6.59□□□□□ -1.35
PRE1YER012W RRM3P38766 723 aa6.58□□□□□ -1.36
PRE1YER012W RPB10P22139 70 aa6.57□□□□□ -1.36
PRE1YER012W KTR2P33550 425 aa6.57□□□□□ -1.36
PRE1YER012W ISW1P38144 1129 aa6.57□□□□□ -1.36
PRE1YER012W YER156CP40093 338 aaKnown RBP6.57□□□□□ -1.36
PRE1YER012W TED1P40533 473 aa6.56□□□□□ -1.36
PRE1YER012W PPT1P53043 513 aa6.56□□□□□ -1.36
PRE1YER012W YIL165CP40446 119 aa6.55□□□□□ -1.36
PRE1YER012W SOK2P53438 785 aaPredicted RBP6.55□□□□□ -1.36
PRE1YER012W EMG1Q06287 252 aaKnown RBP6.55□□□□□ -1.36
PRE1YER012W RLF2Q12495 606 aa6.55□□□□□ -1.36
PRE1YER012W BOL3P39724 118 aa6.54□□□□□ -1.36
PRE1YER012W HXT8P40886 569 aa6.54□□□□□ -1.36
PRE1YER012W YPL034WQ03083 165 aa6.54□□□□□ -1.36
PRE1YER012W RRN6P32786 894 aa6.53□□□□□ -1.36
PRE1YER012W RGD2P43556 714 aa6.53□□□□□ -1.36
PRE1YER012W NRD1P53617 575 aaKnown RBP RIP-Chip data6.53□□□□□ -1.36 RIP-Chip
PRE1YER012W GIP2P40036 548 aa6.52□□□□□ -1.37
PRE1YER012W FIR1P40020 876 aa6.51□□□□□ -1.37
PRE1YER012W AI3P03877 415 aa6.5□□□□□ -1.37
PRE1YER012W AIM46P38885 310 aa6.5□□□□□ -1.37
PRE1YER012W FUR4P05316 633 aaKnown RBP6.49□□□□□ -1.37
PRE1YER012W RSC2Q06488 889 aa6.49□□□□□ -1.37
PRE1YER012W APC11Q12157 165 aa6.49□□□□□ -1.37
PRE1YER012W TY4B-PA0A0B7P3V8 1104 aa6.48□□□□□ -1.37
PRE1YER012W SAC7P17121 654 aa6.48□□□□□ -1.37
PRE1YER012W TFA2P36145 328 aa6.48□□□□□ -1.37
PRE1YER012W INP51P40559 946 aaKnown RBP6.48□□□□□ -1.37
PRE1YER012W ALO1P54783 526 aaKnown RBP6.48□□□□□ -1.37
PRE1YER012W TIF6Q12522 245 aaKnown RBP6.48□□□□□ -1.37
PRE1YER012W TY4A-HQ6Q5P6 413 aa6.48□□□□□ -1.37
PRE1YER012W RAD55P38953 406 aa6.47□□□□□ -1.37
PRE1YER012W LSO1Q3E827 93 aa6.47□□□□□ -1.37
PRE1YER012W ALD3P54114 506 aa6.46□□□□□ -1.38
PRE1YER012W GLT1Q12680 2145 aaKnown RBP6.46□□□□□ -1.38
PRE1YER012W SLP1Q12232 587 aa6.45□□□□□ -1.38
PRE1YER012W PAN5P38787 379 aa6.44□□□□□ -1.38
PRE1YER012W NTA1P40354 457 aa6.44□□□□□ -1.38
PRE1YER012W BIO5P53744 561 aaKnown RBP6.44□□□□□ -1.38
PRE1YER012W RPL34AP87262 121 aaPredicted RBP6.44□□□□□ -1.38
PRE1YER012W TY1A-NL1Q12391 440 aaKnown RBP6.44□□□□□ -1.38
PRE1YER012W GLO3P38682 493 aaKnown RBP6.43□□□□□ -1.38
PRE1YER012W PSY2P40164 858 aa6.43□□□□□ -1.38
PRE1YER012W ARI1P53111 347 aaKnown RBP6.43□□□□□ -1.38
PRE1YER012W KAR5Q04746 504 aa6.43□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms