RNA–Protein interactions for RNA: YDR421W

ARO80, Transcript of Zinc finger transcriptional activator of the Zn2Cys6 family, yeast

Gene ARO80, Length 2,853 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ARO80	YDR421W	SNU66	Q12420	587 aa	Predicted RBP	4.78	□□□□□ -1.64
ARO80	YDR421W	HVG1	P0CE11	249 aa		4.77	□□□□□ -1.65
ARO80	YDR421W	SEC20	P28791	383 aa		4.77	□□□□□ -1.65
ARO80	YDR421W	RPN1	P38764	993 aa	Known RBP	4.77	□□□□□ -1.65
ARO80	YDR421W	PRP42	Q03776	544 aa	Known RBP	4.77	□□□□□ -1.65
ARO80	YDR421W	CST9	Q06032	482 aa		4.77	□□□□□ -1.65
ARO80	YDR421W	PEA2	P40091	420 aa		4.77	□□□□□ -1.65
ARO80	YDR421W	PTK2	P47116	818 aa	Known RBP	4.77	□□□□□ -1.65
ARO80	YDR421W	CSR2	Q12734	1121 aa		4.77	□□□□□ -1.65
ARO80	YDR421W	SSA4	P22202	642 aa	Known RBP	4.76	□□□□□ -1.65
ARO80	YDR421W	FRD1	P32614	470 aa	Known RBP	4.76	□□□□□ -1.65
ARO80	YDR421W	YFH7	P43591	353 aa		4.76	□□□□□ -1.65
ARO80	YDR421W	APL6	P46682	809 aa		4.76	□□□□□ -1.65
ARO80	YDR421W	SNU71	P53207	620 aa	Known RBP	4.76	□□□□□ -1.65
ARO80	YDR421W	FAR11	P53917	953 aa		4.76	□□□□□ -1.65
ARO80	YDR421W	SRC1	Q03707	834 aa		4.76	□□□□□ -1.65
ARO80	YDR421W	NCB2	Q92317	146 aa		4.76	□□□□□ -1.65
ARO80	YDR421W	YIL089W	P40500	205 aa		4.75	□□□□□ -1.65
ARO80	YDR421W	KAR5	Q04746	504 aa		4.75	□□□□□ -1.65
ARO80	YDR421W	FLO11	P08640	1367 aa		4.75	□□□□□ -1.65
ARO80	YDR421W	PER1	P25625	357 aa		4.75	□□□□□ -1.65
ARO80	YDR421W	MOT2	P34909	587 aa	Known RBP	4.75	□□□□□ -1.65
ARO80	YDR421W	TUS1	Q06412	1307 aa		4.75	□□□□□ -1.65
ARO80	YDR421W	THI3	Q07471	609 aa		4.75	□□□□□ -1.65
ARO80	YDR421W	ZDS2	P54786	942 aa		4.75	□□□□□ -1.65
ARO80	YDR421W	VPS64	Q03944	604 aa		4.75	□□□□□ -1.65
ARO80	YDR421W	AIM21	P40563	679 aa		4.74	□□□□□ -1.65
ARO80	YDR421W	FCP1	Q03254	732 aa		4.74	□□□□□ -1.65
ARO80	YDR421W	PKH1	Q03407	766 aa		4.74	□□□□□ -1.65
ARO80	YDR421W	CWC15	Q03772	175 aa	Known RBP	4.74	□□□□□ -1.65
ARO80	YDR421W	BRE1	Q07457	700 aa	Known RBP	4.74	□□□□□ -1.65
ARO80	YDR421W	MOT1	P32333	1867 aa		4.74	□□□□□ -1.65
ARO80	YDR421W	TIM23	P32897	222 aa		4.74	□□□□□ -1.65
ARO80	YDR421W	RSC30	P38781	883 aa		4.74	□□□□□ -1.65
ARO80	YDR421W	YNG2	P38806	282 aa	Known RBP	4.74	□□□□□ -1.65
ARO80	YDR421W	YGL242C	P53066	181 aa		4.74	□□□□□ -1.65
ARO80	YDR421W	MTC3	P53077	123 aa		4.74	□□□□□ -1.65
ARO80	YDR421W	SKG3	Q06315	1026 aa		4.74	□□□□□ -1.65
ARO80	YDR421W	HAL5	P38970	855 aa	Known RBP	4.73	□□□□□ -1.65
ARO80	YDR421W	EPS1	P40557	701 aa		4.73	□□□□□ -1.65
ARO80	YDR421W	POL32	P47110	350 aa		4.73	□□□□□ -1.65
ARO80	YDR421W	IRC4	Q03036	179 aa		4.73	□□□□□ -1.65
ARO80	YDR421W	CTI6	Q08923	506 aa		4.73	□□□□□ -1.65
ARO80	YDR421W	TAH18	Q12181	623 aa		4.73	□□□□□ -1.65
ARO80	YDR421W	ICL1	P28240	557 aa	Predicted RBP	4.73	□□□□□ -1.65
ARO80	YDR421W	RPT4	P53549	437 aa	Known RBP	4.73	□□□□□ -1.65
ARO80	YDR421W	KIN1	P13185	1064 aa		4.72	□□□□□ -1.65
ARO80	YDR421W	SEC18	P18759	758 aa	Known RBP	4.72	□□□□□ -1.65
ARO80	YDR421W	SPB4	P25808	606 aa	Predicted RBP	4.72	□□□□□ -1.65
ARO80	YDR421W	ECM21	P38167	1117 aa	Known RBP	4.72	□□□□□ -1.65
ARO80	YDR421W	TIF4631	P39935	952 aa	Known RBP	4.72	□□□□□ -1.65
ARO80	YDR421W	FET4	P40988	552 aa		4.72	□□□□□ -1.65
ARO80	YDR421W	BBC1	P47068	1157 aa		4.72	□□□□□ -1.65
ARO80	YDR421W	TPM1	P17536	199 aa	Known RBP	4.72	□□□□□ -1.65
ARO80	YDR421W	ASF1	P32447	279 aa		4.72	□□□□□ -1.65
ARO80	YDR421W	NET1	P47035	1189 aa		4.72	□□□□□ -1.65
ARO80	YDR421W	SLI15	P38283	698 aa		4.71	□□□□□ -1.65
ARO80	YDR421W	SET4	P42948	560 aa		4.71	□□□□□ -1.65
ARO80	YDR421W	YAF9	P53930	226 aa		4.71	□□□□□ -1.65
ARO80	YDR421W	SSF2	Q12153	453 aa	Predicted RBP	4.71	□□□□□ -1.65
ARO80	YDR421W	TY3A-G	Q12173	290 aa		4.71	□□□□□ -1.65
ARO80	YDR421W	TY3A-I	Q99219	290 aa		4.71	□□□□□ -1.65
ARO80	YDR421W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.66	not detected
ARO80	YDR421W	JJJ2	P46997	583 aa		4.71	□□□□□ -1.66
ARO80	YDR421W	SQS1	P53866	767 aa	Known RBP	4.71	□□□□□ -1.66
ARO80	YDR421W	GUD1	Q07729	489 aa		4.71	□□□□□ -1.66
ARO80	YDR421W	TIF6	Q12522	245 aa	Known RBP	4.71	□□□□□ -1.66
ARO80	YDR421W	ENP2	P48234	707 aa	Known RBP	4.71	□□□□□ -1.66
ARO80	YDR421W	PPM2	Q08282	695 aa		4.71	□□□□□ -1.66
ARO80	YDR421W	ECM29	P38737	1868 aa		4.7	□□□□□ -1.66
ARO80	YDR421W	SOL4	P53315	255 aa		4.7	□□□□□ -1.66
ARO80	YDR421W	NOT3	P06102	836 aa	Known RBP	4.7	□□□□□ -1.66
ARO80	YDR421W	NGR1	P32831	672 aa	Known RBP	4.7	□□□□□ -1.66
ARO80	YDR421W	BOI1	P38041	980 aa	Known RBP	4.7	□□□□□ -1.66
ARO80	YDR421W	SPO22	P40511	975 aa		4.7	□□□□□ -1.66
ARO80	YDR421W	PKH3	Q03306	898 aa	Predicted RBP	4.7	□□□□□ -1.66
ARO80	YDR421W	YIR014W	P40570	242 aa		4.69	□□□□□ -1.66
ARO80	YDR421W	NCS6	P53088	359 aa		4.69	□□□□□ -1.66
ARO80	YDR421W	ECM23	Q02710	187 aa		4.69	□□□□□ -1.66
ARO80	YDR421W	RTS1	P38903	757 aa		4.69	□□□□□ -1.66
ARO80	YDR421W	NIT1	P40447	199 aa		4.69	□□□□□ -1.66
ARO80	YDR421W	RAD61	Q99359	647 aa		4.69	□□□□□ -1.66
ARO80	YDR421W	YKR018C	P36114	725 aa		4.68	□□□□□ -1.66
ARO80	YDR421W	DUS1	P53759	423 aa	Known RBP	4.68	□□□□□ -1.66
ARO80	YDR421W	ERG12	P07277	443 aa		4.68	□□□□□ -1.66
ARO80	YDR421W	RAD53	P22216	821 aa		4.68	□□□□□ -1.66
ARO80	YDR421W	KTR3	P38130	404 aa	Predicted RBP	4.68	□□□□□ -1.66
ARO80	YDR421W	NMD2	P38798	1089 aa	Known RBP	4.68	□□□□□ -1.66
ARO80	YDR421W	PIP2	P52960	996 aa		4.68	□□□□□ -1.66
ARO80	YDR421W	RBA50	Q04418	439 aa		4.68	□□□□□ -1.66
ARO80	YDR421W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
ARO80	YDR421W	OPY1	P38271	328 aa		4.67	□□□□□ -1.66
ARO80	YDR421W	GAS5	Q08193	484 aa		4.67	□□□□□ -1.66
ARO80	YDR421W	KTR1	P27810	393 aa	Known RBP	4.67	□□□□□ -1.66
ARO80	YDR421W	APE3	P37302	537 aa	Known RBP	4.67	□□□□□ -1.66
ARO80	YDR421W	TPS3	P38426	1054 aa	Known RBP	4.67	□□□□□ -1.66
ARO80	YDR421W	CRG1	P38892	291 aa	RIP-Chip data	4.67	□□□□□ -1.66	not detected
ARO80	YDR421W	MXR1	P40029	184 aa		4.67	□□□□□ -1.66
ARO80	YDR421W	LYS14	P40971	790 aa		4.67	□□□□□ -1.66
ARO80	YDR421W	PUS6	P53294	404 aa		4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms