RNA–Protein interactions for RNA: YDR412W

RRP17, Transcript of Component of the pre-60S pre-ribosomal particle, yeastyeast

Gene RRP17, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP17YDR412W SKP1P52286 194 aa7.93□□□□□ -1.14
RRP17YDR412W CWH41P53008 833 aa7.93□□□□□ -1.14
RRP17YDR412W KTR2P33550 425 aa7.92□□□□□ -1.14
RRP17YDR412W PUF6Q04373 656 aaKnown RBP7.92□□□□□ -1.14
RRP17YDR412W THI72Q08579 599 aa7.91□□□□□ -1.14
RRP17YDR412W PDC5P16467 563 aaKnown RBP7.9□□□□□ -1.14
RRP17YDR412W BSD2P38356 321 aa7.9□□□□□ -1.14
RRP17YDR412W SRS2P12954 1174 aa7.89□□□□□ -1.15
RRP17YDR412W PRK1P40494 810 aa7.89□□□□□ -1.15
RRP17YDR412W NSG2P53898 299 aa7.89□□□□□ -1.15
RRP17YDR412W PNP1Q05788 311 aa7.89□□□□□ -1.15
RRP17YDR412W MRP10O75012 95 aa7.88□□□□□ -1.15
RRP17YDR412W AI1P03875 834 aa7.88□□□□□ -1.15
RRP17YDR412W BOL3P39724 118 aa7.87□□□□□ -1.15
RRP17YDR412W ITC1P53125 1264 aa7.87□□□□□ -1.15
RRP17YDR412W RPB10P22139 70 aa7.85□□□□□ -1.15
RRP17YDR412W KNS1P32350 737 aaPredicted RBP7.84□□□□□ -1.15
RRP17YDR412W TDA6Q06466 467 aa7.84□□□□□ -1.15
RRP17YDR412W APM2P38700 605 aa7.83□□□□□ -1.16
RRP17YDR412W ICP55P40051 511 aa7.83□□□□□ -1.16
RRP17YDR412W YOR296WQ08748 1289 aa7.83□□□□□ -1.16
RRP17YDR412W IDI1P15496 288 aa7.81□□□□□ -1.16
RRP17YDR412W MSN1P22148 382 aa7.81□□□□□ -1.16
RRP17YDR412W NCL1P38205 684 aaKnown RBP7.81□□□□□ -1.16
RRP17YDR412W LDH1P38139 375 aa7.8□□□□□ -1.16
RRP17YDR412W DYS1P38791 387 aa7.8□□□□□ -1.16
RRP17YDR412W HEH2Q03281 663 aa7.8□□□□□ -1.16
RRP17YDR412W APC11Q12157 165 aa7.8□□□□□ -1.16
RRP17YDR412W PHM7Q12252 991 aa7.8□□□□□ -1.16
RRP17YDR412W SUT1P53032 299 aaKnown RBP7.79□□□□□ -1.16
RRP17YDR412W GIP1P38229 639 aa7.78□□□□□ -1.16
RRP17YDR412W YNR014WP53719 212 aa7.78□□□□□ -1.16
RRP17YDR412W LSO1Q3E827 93 aa7.78□□□□□ -1.16
RRP17YDR412W YCK2P23292 546 aaKnown RBP7.77□□□□□ -1.17
RRP17YDR412W RGD2P43556 714 aa7.77□□□□□ -1.17
RRP17YDR412W NAR1P23503 491 aaKnown RBP7.76□□□□□ -1.17
RRP17YDR412W BOI2P39969 1040 aa7.76□□□□□ -1.17
RRP17YDR412W PGM2P37012 569 aaKnown RBP7.75□□□□□ -1.17
RRP17YDR412W SLN1P39928 1220 aaPredicted RBP7.75□□□□□ -1.17
RRP17YDR412W PUS1Q12211 544 aaKnown RBP7.75□□□□□ -1.17
RRP17YDR412W SSA1P10591 642 aaKnown RBP7.74□□□□□ -1.17
RRP17YDR412W MCX1P38323 520 aaPredicted RBP7.74□□□□□ -1.17
RRP17YDR412W YER156CP40093 338 aaKnown RBP7.74□□□□□ -1.17
RRP17YDR412W HXT8P40886 569 aa7.74□□□□□ -1.17
RRP17YDR412W MTC5Q03897 1148 aa7.74□□□□□ -1.17
RRP17YDR412W EMG1Q06287 252 aaKnown RBP7.74□□□□□ -1.17
RRP17YDR412W RPP1AP05318 106 aaPredicted RBP7.73□□□□□ -1.17
RRP17YDR412W YIL165CP40446 119 aa7.73□□□□□ -1.17
RRP17YDR412W GIS4Q04233 774 aa7.73□□□□□ -1.17
RRP17YDR412W YDR215CQ12240 137 aa7.73□□□□□ -1.17
RRP17YDR412W RRN6P32786 894 aa7.72□□□□□ -1.17
RRP17YDR412W ISW1P38144 1129 aa7.72□□□□□ -1.17
RRP17YDR412W RPL34AP87262 121 aaPredicted RBP7.72□□□□□ -1.17
RRP17YDR412W YPR053CQ6Q5F3 151 aa7.72□□□□□ -1.17
RRP17YDR412W FUR4P05316 633 aaKnown RBP7.71□□□□□ -1.18
RRP17YDR412W ALG14P38242 237 aa7.71□□□□□ -1.18
RRP17YDR412W LSB3P43603 459 aaKnown RBP7.71□□□□□ -1.18
RRP17YDR412W KAR5Q04746 504 aa7.71□□□□□ -1.18
RRP17YDR412W SKN7P38889 622 aa7.7□□□□□ -1.18
RRP17YDR412W PRY1P47032 299 aa7.7□□□□□ -1.18
RRP17YDR412W CCT8P47079 568 aaKnown RBP7.7□□□□□ -1.18
RRP17YDR412W TIF6Q12522 245 aaKnown RBP7.7□□□□□ -1.18
RRP17YDR412W YJL181WP46987 611 aa7.69□□□□□ -1.18
RRP17YDR412W PPT1P53043 513 aa7.69□□□□□ -1.18
RRP17YDR412W YMR187CQ03236 431 aa7.69□□□□□ -1.18
RRP17YDR412W GLO3P38682 493 aaKnown RBP7.68□□□□□ -1.18
RRP17YDR412W QDR1P40475 563 aa7.68□□□□□ -1.18
RRP17YDR412W GAS5Q08193 484 aa7.68□□□□□ -1.18
RRP17YDR412W MCA1Q08601 432 aa7.68□□□□□ -1.18
RRP17YDR412W TFA2P36145 328 aa7.67□□□□□ -1.18
RRP17YDR412W MET1P36150 593 aa7.66□□□□□ -1.18
RRP17YDR412W GEF1P37020 779 aa7.66□□□□□ -1.18
RRP17YDR412W NTA1P40354 457 aa7.66□□□□□ -1.18
RRP17YDR412W NHA1Q99271 985 aa7.66□□□□□ -1.18
RRP17YDR412W TRL1P09880 827 aaKnown RBP7.65□□□□□ -1.18
RRP17YDR412W RAD55P38953 406 aa7.65□□□□□ -1.18
RRP17YDR412W ALD3P54114 506 aa7.65□□□□□ -1.18
RRP17YDR412W AIM46P38885 310 aa7.63□□□□□ -1.19
RRP17YDR412W TED1P40533 473 aa7.63□□□□□ -1.19
RRP17YDR412W BUD9P53226 547 aa7.63□□□□□ -1.19
RRP17YDR412W ERP5P38819 212 aa7.62□□□□□ -1.19
RRP17YDR412W FIR1P40020 876 aa7.62□□□□□ -1.19
RRP17YDR412W PSY2P40164 858 aa7.62□□□□□ -1.19
RRP17YDR412W ATG1P53104 897 aa7.62□□□□□ -1.19
RRP17YDR412W SOK2P53438 785 aaPredicted RBP7.62□□□□□ -1.19
RRP17YDR412W CDC3P32457 520 aaKnown RBP7.61□□□□□ -1.19
RRP17YDR412W COBP00163 385 aa7.6□□□□□ -1.19
RRP17YDR412W GRS1P38088 690 aaKnown RBP7.6□□□□□ -1.19
RRP17YDR412W RRM3P38766 723 aa7.6□□□□□ -1.19
RRP17YDR412W INP51P40559 946 aaKnown RBP7.6□□□□□ -1.19
RRP17YDR412W MDJ2P42834 146 aa7.6□□□□□ -1.19
RRP17YDR412W CTR9P89105 1077 aa7.6□□□□□ -1.19
RRP17YDR412W MNL2Q12205 849 aa7.6□□□□□ -1.19
RRP17YDR412W IRS4P36115 615 aaKnown RBP7.59□□□□□ -1.19
RRP17YDR412W HAT1Q12341 374 aa7.59□□□□□ -1.19
RRP17YDR412W YBL113CQ7M4S9 792 aa7.59□□□□□ -1.19
RRP17YDR412W PYC2P32327 1180 aaKnown RBP7.58□□□□□ -1.2
RRP17YDR412W SMC1P32908 1225 aa7.58□□□□□ -1.2
RRP17YDR412W AMN1P38285 549 aaPredicted RBP7.58□□□□□ -1.2
RRP17YDR412W GIP2P40036 548 aa7.58□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms