RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	UBP15	P50101	1230 aa		7.35	□□□□□ -1.23
NSE3	YDR288W	SMC1	P32908	1225 aa		7.34	□□□□□ -1.23
NSE3	YDR288W	YBR287W	P38355	427 aa		7.34	□□□□□ -1.23
NSE3	YDR288W	SCW11	P53189	542 aa		7.34	□□□□□ -1.23
NSE3	YDR288W	PSH1	Q12161	406 aa		7.34	□□□□□ -1.23
NSE3	YDR288W	FRT1	Q99332	602 aa		7.34	□□□□□ -1.23
NSE3	YDR288W	ASF1	P32447	279 aa		7.33	□□□□□ -1.24
NSE3	YDR288W	GLY1	P37303	387 aa	Known RBP	7.32	□□□□□ -1.24
NSE3	YDR288W	OSH7	P38755	437 aa		7.32	□□□□□ -1.24
NSE3	YDR288W	YDR444W	Q04093	687 aa		7.31	□□□□□ -1.24
NSE3	YDR288W	CDC19	P00549	500 aa	Known RBP	7.3	□□□□□ -1.24
NSE3	YDR288W	RAD55	P38953	406 aa		7.3	□□□□□ -1.24
NSE3	YDR288W	POL32	P47110	350 aa		7.3	□□□□□ -1.24
NSE3	YDR288W	LEU1	P07264	779 aa	Known RBP	7.29	□□□□□ -1.24
NSE3	YDR288W	MSN1	P22148	382 aa		7.29	□□□□□ -1.24
NSE3	YDR288W	ISW1	P38144	1129 aa		7.29	□□□□□ -1.24
NSE3	YDR288W	WHI5	Q12416	295 aa		7.29	□□□□□ -1.24
NSE3	YDR288W	MET22	P32179	357 aa		7.28	□□□□□ -1.24
NSE3	YDR288W	GIP1	P38229	639 aa		7.28	□□□□□ -1.24
NSE3	YDR288W	YNL011C	P53980	444 aa		7.28	□□□□□ -1.24
NSE3	YDR288W	LCB5	Q06147	687 aa	Known RBP	7.28	□□□□□ -1.24
NSE3	YDR288W	TY1A-BL	Q12266	440 aa		7.28	□□□□□ -1.24
NSE3	YDR288W	RPP1A	P05318	106 aa	Predicted RBP	7.27	□□□□□ -1.25
NSE3	YDR288W	RGP1	P16664	663 aa		7.27	□□□□□ -1.25
NSE3	YDR288W	MRPL16	P38064	232 aa		7.27	□□□□□ -1.25
NSE3	YDR288W	MGE1	P38523	228 aa		7.27	□□□□□ -1.25
NSE3	YDR288W	ALD2	P47771	506 aa		7.27	□□□□□ -1.25
NSE3	YDR288W	SNU71	P53207	620 aa	Known RBP	7.27	□□□□□ -1.25
NSE3	YDR288W	YOR296W	Q08748	1289 aa		7.27	□□□□□ -1.25
NSE3	YDR288W	STB3	Q12427	513 aa		7.27	□□□□□ -1.25
NSE3	YDR288W	CUS1	Q02554	436 aa	Predicted RBP	7.26	□□□□□ -1.25
NSE3	YDR288W	RPC31	P17890	251 aa		7.25	□□□□□ -1.25
NSE3	YDR288W	KTR2	P33550	425 aa		7.25	□□□□□ -1.25
NSE3	YDR288W	BSD2	P38356	321 aa		7.25	□□□□□ -1.25
NSE3	YDR288W	NTA1	P40354	457 aa		7.25	□□□□□ -1.25
NSE3	YDR288W	IRS4	P36115	615 aa	Known RBP	7.24	□□□□□ -1.25
NSE3	YDR288W	APM2	P38700	605 aa		7.24	□□□□□ -1.25
NSE3	YDR288W	CDC55	Q00362	526 aa		7.24	□□□□□ -1.25
NSE3	YDR288W	MET4	P32389	672 aa		7.23	□□□□□ -1.25
NSE3	YDR288W	GCD6	P32501	712 aa	Known RBP	7.23	□□□□□ -1.25
NSE3	YDR288W	NCL1	P38205	684 aa	Known RBP	7.23	□□□□□ -1.25
NSE3	YDR288W	PSY2	P40164	858 aa		7.23	□□□□□ -1.25
NSE3	YDR288W	RGD2	P43556	714 aa		7.23	□□□□□ -1.25
NSE3	YDR288W	SAM37	P50110	327 aa		7.23	□□□□□ -1.25
NSE3	YDR288W	YPL062W	Q02781	134 aa		7.23	□□□□□ -1.25
NSE3	YDR288W	YMR265C	Q03508	461 aa	Known RBP	7.23	□□□□□ -1.25
NSE3	YDR288W	GPI13	Q07830	1017 aa		7.23	□□□□□ -1.25
NSE3	YDR288W	MNL2	Q12205	849 aa		7.23	□□□□□ -1.25
NSE3	YDR288W	GAR1	P28007	205 aa	Known RBP	7.22	□□□□□ -1.25
NSE3	YDR288W	AIM46	P38885	310 aa		7.22	□□□□□ -1.25
NSE3	YDR288W	SKP1	P52286	194 aa		7.22	□□□□□ -1.25
NSE3	YDR288W	NOP7	P53261	605 aa	Known RBP	7.22	□□□□□ -1.25
NSE3	YDR288W	NAM8	Q00539	523 aa	Known RBP	7.22	□□□□□ -1.25
NSE3	YDR288W	BSC2	Q05611	235 aa		7.22	□□□□□ -1.25
NSE3	YDR288W	TIF6	Q12522	245 aa	Known RBP	7.22	□□□□□ -1.25
NSE3	YDR288W	ECM2	P38241	364 aa	Known RBP	7.21	□□□□□ -1.26
NSE3	YDR288W	ROG3	P43602	733 aa		7.21	□□□□□ -1.26
NSE3	YDR288W	RSC4	Q02206	625 aa		7.21	□□□□□ -1.26
NSE3	YDR288W	ATE1	P16639	503 aa		7.2	□□□□□ -1.26
NSE3	YDR288W	DIT1	P21623	536 aa		7.2	□□□□□ -1.26
NSE3	YDR288W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	7.2	□□□□□ -1.26	not detected
NSE3	YDR288W	CIC1	P38779	376 aa	Known RBP	7.2	□□□□□ -1.26
NSE3	YDR288W	TY1A-MR1	Q04215	440 aa		7.2	□□□□□ -1.26
NSE3	YDR288W	NOC3	Q07896	663 aa	Predicted RBP	7.2	□□□□□ -1.26
NSE3	YDR288W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	7.19	□□□□□ -1.26	not detected
NSE3	YDR288W	KRE33	P53914	1056 aa	Known RBP	7.19	□□□□□ -1.26
NSE3	YDR288W	OXR1	Q08952	273 aa		7.19	□□□□□ -1.26
NSE3	YDR288W	PHO4	P07270	312 aa	Known RBP	7.18	□□□□□ -1.26
NSE3	YDR288W	FPS1	P23900	669 aa		7.18	□□□□□ -1.26
NSE3	YDR288W	RPT1	P33299	467 aa	Known RBP	7.18	□□□□□ -1.26
NSE3	YDR288W	YHL008C	P38750	627 aa		7.18	□□□□□ -1.26
NSE3	YDR288W	ITC1	P53125	1264 aa		7.18	□□□□□ -1.26
NSE3	YDR288W	CAF120	P53836	1060 aa		7.18	□□□□□ -1.26
NSE3	YDR288W	CUZ1	P53899	274 aa		7.18	□□□□□ -1.26
NSE3	YDR288W	VPS35	P34110	944 aa		7.17	□□□□□ -1.26
NSE3	YDR288W	YIL165C	P40446	119 aa		7.17	□□□□□ -1.26
NSE3	YDR288W	YNR040W	P53736	256 aa		7.17	□□□□□ -1.26
NSE3	YDR288W	ADE12	P80210	433 aa	Known RBP	7.17	□□□□□ -1.26
NSE3	YDR288W	SEC8	P32855	1065 aa		7.16	□□□□□ -1.26
NSE3	YDR288W	CEM1	P39525	442 aa		7.16	□□□□□ -1.26
NSE3	YDR288W	YIR007W	P40566	764 aa		7.16	□□□□□ -1.26
NSE3	YDR288W	DAK2	P43550	591 aa		7.16	□□□□□ -1.26
NSE3	YDR288W	HEH2	Q03281	663 aa		7.16	□□□□□ -1.26
NSE3	YDR288W	OYE2	Q03558	400 aa	Known RBP	7.16	□□□□□ -1.26
NSE3	YDR288W	EMG1	Q06287	252 aa	Known RBP	7.16	□□□□□ -1.26
NSE3	YDR288W	RRP15	Q06511	250 aa	Predicted RBP	7.16	□□□□□ -1.26
NSE3	YDR288W	INP54	Q08227	384 aa	Known RBP	7.16	□□□□□ -1.26
NSE3	YDR288W	ACO2	P39533	789 aa		7.15	□□□□□ -1.26
NSE3	YDR288W	RSC2	Q06488	889 aa		7.15	□□□□□ -1.26
NSE3	YDR288W	YJR107W	P47145	328 aa		7.12	□□□□□ -1.27
NSE3	YDR288W	MET1	P36150	593 aa		7.11	□□□□□ -1.27
NSE3	YDR288W	MET10	P39692	1035 aa		7.11	□□□□□ -1.27
NSE3	YDR288W	YJL181W	P46987	611 aa		7.11	□□□□□ -1.27
NSE3	YDR288W	PPT1	P53043	513 aa		7.11	□□□□□ -1.27
NSE3	YDR288W	YDR461C-A	Q2V2P7	80 aa		7.11	□□□□□ -1.27
NSE3	YDR288W	CCP1	P00431	361 aa		7.1	□□□□□ -1.27
NSE3	YDR288W	FLP1	P03870	423 aa		7.1	□□□□□ -1.27
NSE3	YDR288W	YER156C	P40093	338 aa	Known RBP	7.1	□□□□□ -1.27
NSE3	YDR288W	IDI1	P15496	288 aa		7.09	□□□□□ -1.27
NSE3	YDR288W	PYC2	P32327	1180 aa	Known RBP	7.09	□□□□□ -1.27

Retrieved 100 of 5,963 RNA–protein pairs in 59.2 ms