RNA–Protein interactions for RNA: YDL130W

RPP1B, Transcript of Ribosomal protein P1 beta, yeast

Gene RPP1B, Length 321 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPP1B	YDL130W	SEN54	Q02825	467 aa	Predicted RBP	18.96	■□□□□ 0.63
RPP1B	YDL130W	PSF3	Q12146	194 aa		18.96	■□□□□ 0.63
RPP1B	YDL130W	ILV3	P39522	585 aa	Known RBP	18.95	■□□□□ 0.62
RPP1B	YDL130W	JJJ2	P46997	583 aa		18.95	■□□□□ 0.62
RPP1B	YDL130W	POL32	P47110	350 aa		18.95	■□□□□ 0.62
RPP1B	YDL130W	HPR1	P17629	752 aa	Known RBP	18.94	■□□□□ 0.62
RPP1B	YDL130W	STV1	P37296	890 aa		18.94	■□□□□ 0.62
RPP1B	YDL130W	FIG2	P25653	1609 aa		18.93	■□□□□ 0.62
RPP1B	YDL130W	EMP47	P43555	445 aa		18.93	■□□□□ 0.62
RPP1B	YDL130W	ARG82	P07250	355 aa		18.92	■□□□□ 0.62
RPP1B	YDL130W	WRS1	Q12109	432 aa	Known RBP	18.92	■□□□□ 0.62
RPP1B	YDL130W	NCB2	Q92317	146 aa		18.92	■□□□□ 0.62
RPP1B	YDL130W	FLO11	P08640	1367 aa		18.92	■□□□□ 0.62
RPP1B	YDL130W	RRD1	P40454	393 aa	Known RBP	18.91	■□□□□ 0.62
RPP1B	YDL130W	RRI2	Q12348	645 aa		18.91	■□□□□ 0.62
RPP1B	YDL130W	AI2	P03876	854 aa		18.89	■□□□□ 0.61
RPP1B	YDL130W	RPS7A	P26786	190 aa	Known RBP	18.89	■□□□□ 0.61
RPP1B	YDL130W	YNL193W	P53870	558 aa		18.88	■□□□□ 0.61
RPP1B	YDL130W	ACK1	Q07622	623 aa	Predicted RBP	18.88	■□□□□ 0.61
RPP1B	YDL130W	RPT3	P33298	428 aa	Known RBP	18.87	■□□□□ 0.61
RPP1B	YDL130W	GLO3	P38682	493 aa	Known RBP	18.87	■□□□□ 0.61
RPP1B	YDL130W	PEA2	P40091	420 aa		18.87	■□□□□ 0.61
RPP1B	YDL130W	YFH7	P43591	353 aa		18.87	■□□□□ 0.61
RPP1B	YDL130W	DUR1,2	P32528	1835 aa	Known RBP	18.86	■□□□□ 0.61
RPP1B	YDL130W	NMD2	P38798	1089 aa	Known RBP	18.85	■□□□□ 0.61
RPP1B	YDL130W	RPN7	Q06103	429 aa	Known RBP	18.85	■□□□□ 0.61
RPP1B	YDL130W	PIF1	P07271	859 aa		18.84	■□□□□ 0.61
RPP1B	YDL130W	HAL5	P38970	855 aa	Known RBP	18.83	■□□□□ 0.6
RPP1B	YDL130W	YIR042C	P40586	236 aa		18.83	■□□□□ 0.6
RPP1B	YDL130W	CWC15	Q03772	175 aa	Known RBP	18.83	■□□□□ 0.6
RPP1B	YDL130W	INM2	Q05533	292 aa		18.83	■□□□□ 0.6
RPP1B	YDL130W	YIL089W	P40500	205 aa		18.82	■□□□□ 0.6
RPP1B	YDL130W	CBP1	P07252	654 aa		18.81	■□□□□ 0.6
RPP1B	YDL130W	BDP1	P46678	594 aa		18.81	■□□□□ 0.6
RPP1B	YDL130W	YGL242C	P53066	181 aa		18.8	■□□□□ 0.6
RPP1B	YDL130W	PUS6	P53294	404 aa		18.8	■□□□□ 0.6
RPP1B	YDL130W	PTK1	P36002	662 aa	Predicted RBP	18.79	■□□□□ 0.6
RPP1B	YDL130W	UTP7	P40055	554 aa	Known RBP	18.78	■□□□□ 0.6
RPP1B	YDL130W	MTC3	P53077	123 aa		18.78	■□□□□ 0.6
RPP1B	YDL130W	MDL2	P33311	773 aa		18.75	■□□□□ 0.59
RPP1B	YDL130W	KTR3	P38130	404 aa	Predicted RBP	18.75	■□□□□ 0.59
RPP1B	YDL130W	APL6	P46682	809 aa		18.75	■□□□□ 0.59
RPP1B	YDL130W	YJL171C	P46992	396 aa		18.75	■□□□□ 0.59
RPP1B	YDL130W	MLC1	P53141	149 aa		18.75	■□□□□ 0.59
RPP1B	YDL130W	PDR18	P53756	1333 aa		18.74	■□□□□ 0.59
RPP1B	YDL130W	NOT3	P06102	836 aa	Known RBP	18.73	■□□□□ 0.59
RPP1B	YDL130W	FPR3	P38911	411 aa	Known RBP	18.73	■□□□□ 0.59
RPP1B	YDL130W	SNF3	P10870	884 aa		18.72	■□□□□ 0.59
RPP1B	YDL130W	TYW1	Q08960	810 aa	Known RBP	18.72	■□□□□ 0.59
RPP1B	YDL130W	ALO1	P54783	526 aa	Known RBP	18.71	■□□□□ 0.59
RPP1B	YDL130W	ECM21	P38167	1117 aa	Known RBP	18.7	■□□□□ 0.58
RPP1B	YDL130W	CYB2	P00175	591 aa		18.69	■□□□□ 0.58
RPP1B	YDL130W	BOI1	P38041	980 aa	Known RBP	18.69	■□□□□ 0.58
RPP1B	YDL130W	NIT1	P40447	199 aa		18.69	■□□□□ 0.58
RPP1B	YDL130W	TOM1	Q03280	3268 aa		18.69	■□□□□ 0.58
RPP1B	YDL130W	ETP1	P38748	585 aa	Known RBP	18.68	■□□□□ 0.58
RPP1B	YDL130W	AAD16	Q02895	342 aa		18.68	■□□□□ 0.58
RPP1B	YDL130W	PNT1	P38969	423 aa		18.67	■□□□□ 0.58
RPP1B	YDL130W	GRX7	P38068	203 aa		18.66	■□□□□ 0.58
RPP1B	YDL130W	RFC1	P38630	861 aa	Known RBP	18.66	■□□□□ 0.58
RPP1B	YDL130W	RRT6	P53117	311 aa	Predicted RBP	18.66	■□□□□ 0.58
RPP1B	YDL130W	GAL2	P13181	574 aa		18.65	■□□□□ 0.58
RPP1B	YDL130W	PIP2	P52960	996 aa		18.64	■□□□□ 0.57
RPP1B	YDL130W	CSR2	Q12734	1121 aa		18.64	■□□□□ 0.57
RPP1B	YDL130W	EPS1	P40557	701 aa		18.63	■□□□□ 0.57
RPP1B	YDL130W	RMD1	Q03441	430 aa		18.62	■□□□□ 0.57
RPP1B	YDL130W	PBY1	P38254	753 aa		18.61	■□□□□ 0.57
RPP1B	YDL130W	DUS1	P53759	423 aa	Known RBP	18.61	■□□□□ 0.57
RPP1B	YDL130W	NSG2	P53898	299 aa		18.61	■□□□□ 0.57
RPP1B	YDL130W	CDC16	P09798	840 aa		18.6	■□□□□ 0.57
RPP1B	YDL130W	BSD2	P38356	321 aa		18.6	■□□□□ 0.57
RPP1B	YDL130W	GEF1	P37020	779 aa		18.59	■□□□□ 0.57
RPP1B	YDL130W	YMR147W	P40218	223 aa	Known RBP	18.59	■□□□□ 0.57
RPP1B	YDL130W	NOP2	P40991	618 aa	Known RBP	18.59	■□□□□ 0.57
RPP1B	YDL130W	BRE1	Q07457	700 aa	Known RBP	18.59	■□□□□ 0.57
RPP1B	YDL130W	RAD53	P22216	821 aa		18.58	■□□□□ 0.56
RPP1B	YDL130W	ADP1	P25371	1049 aa		18.58	■□□□□ 0.56
RPP1B	YDL130W	NPL4	P33755	580 aa		18.58	■□□□□ 0.56
RPP1B	YDL130W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	18.58	■□□□□ 0.56	not detected
RPP1B	YDL130W	KEL1	P38853	1164 aa	Known RBP	18.58	■□□□□ 0.56
RPP1B	YDL130W	NKP2	Q06162	153 aa		18.58	■□□□□ 0.56
RPP1B	YDL130W	PMA1	P05030	918 aa	Known RBP	18.57	■□□□□ 0.56
RPP1B	YDL130W	HVG1	P0CE11	249 aa		18.57	■□□□□ 0.56
RPP1B	YDL130W	PIB2	P53191	635 aa		18.57	■□□□□ 0.56
RPP1B	YDL130W	ECM16	Q04217	1267 aa	Known RBP	18.57	■□□□□ 0.56
RPP1B	YDL130W	FLO1	P32768	1537 aa		18.56	■□□□□ 0.56
RPP1B	YDL130W	TPS3	P38426	1054 aa	Known RBP	18.56	■□□□□ 0.56
RPP1B	YDL130W	IRC8	P47046	822 aa		18.56	■□□□□ 0.56
RPP1B	YDL130W	ENP2	P48234	707 aa	Known RBP	18.56	■□□□□ 0.56
RPP1B	YDL130W	MRPS35	P53292	345 aa		18.56	■□□□□ 0.56
RPP1B	YDL130W	PCL8	Q08966	492 aa		18.56	■□□□□ 0.56
RPP1B	YDL130W	OSH3	P38713	996 aa	Known RBP	18.54	■□□□□ 0.56
RPP1B	YDL130W	IOC3	P43596	787 aa		18.54	■□□□□ 0.56
RPP1B	YDL130W	TIF6	Q12522	245 aa	Known RBP	18.53	■□□□□ 0.56
RPP1B	YDL130W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	18.52	■□□□□ 0.56	not detected
RPP1B	YDL130W	KTR1	P27810	393 aa	Known RBP	18.52	■□□□□ 0.56
RPP1B	YDL130W	YBL028C	P38202	106 aa		18.52	■□□□□ 0.56
RPP1B	YDL130W	MSH4	P40965	878 aa	Predicted RBP	18.52	■□□□□ 0.56
RPP1B	YDL130W	KAR5	Q04746	504 aa		18.51	■□□□□ 0.55
RPP1B	YDL130W	KEL3	Q08979	651 aa	Predicted RBP	18.51	■□□□□ 0.55

Retrieved 100 of 5,963 RNA–protein pairs in 159.4 ms