RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W SWI1P09547 1314 aa8.06□□□□□ -1.12
NUP84YDL116W DCD1P06773 312 aa8.06□□□□□ -1.12
NUP84YDL116W GEF1P37020 779 aa8.06□□□□□ -1.12
NUP84YDL116W SSK22P25390 1331 aaPredicted RBP8.06□□□□□ -1.12
NUP84YDL116W SWE1P32944 819 aa8.05□□□□□ -1.12
NUP84YDL116W IES2P40154 320 aa8.05□□□□□ -1.12
NUP84YDL116W PEX14P53112 341 aa8.05□□□□□ -1.12
NUP84YDL116W RRP43P25359 394 aaPredicted RBP8.05□□□□□ -1.12
NUP84YDL116W SRP40P32583 406 aaPredicted RBP8.05□□□□□ -1.12
NUP84YDL116W LTV1P34078 463 aa8.05□□□□□ -1.12
NUP84YDL116W XKS1P42826 600 aa8.05□□□□□ -1.12
NUP84YDL116W EPL1P43572 832 aa8.05□□□□□ -1.12
NUP84YDL116W CTH1P47976 325 aa8.05□□□□□ -1.12
NUP84YDL116W DIT2P21595 489 aa8.04□□□□□ -1.12
NUP84YDL116W NCB2Q92317 146 aa8.04□□□□□ -1.12
NUP84YDL116W STM1P39015 273 aaKnown RBP8.04□□□□□ -1.12
NUP84YDL116W SAP1P39955 897 aaKnown RBP8.04□□□□□ -1.12
NUP84YDL116W PRP5P21372 849 aaPredicted RBP8.03□□□□□ -1.12
NUP84YDL116W UGA3P26370 528 aa8.03□□□□□ -1.12
NUP84YDL116W UBP12P39538 1254 aa8.03□□□□□ -1.12
NUP84YDL116W HYR1P40581 163 aaKnown RBP8.03□□□□□ -1.12
NUP84YDL116W NUP42P49686 430 aaKnown RBP8.03□□□□□ -1.12
NUP84YDL116W IMP2'P32351 346 aa8.03□□□□□ -1.12
NUP84YDL116W PCH2P38126 564 aa8.03□□□□□ -1.12
NUP84YDL116W GDT1P38301 280 aaPredicted RBP8.03□□□□□ -1.12
NUP84YDL116W STU2P46675 888 aa8.03□□□□□ -1.12
NUP84YDL116W BRE1Q07457 700 aaKnown RBP8.03□□□□□ -1.12
NUP84YDL116W SUB2Q07478 446 aaKnown RBP8.03□□□□□ -1.12
NUP84YDL116W INP54Q08227 384 aaKnown RBP8.03□□□□□ -1.12
NUP84YDL116W APL4Q12028 832 aa8.03□□□□□ -1.12
NUP84YDL116W MAK11P20484 414 aaKnown RBP8.02□□□□□ -1.13
NUP84YDL116W CDC15P27636 974 aa8.02□□□□□ -1.13
NUP84YDL116W RFC5P38251 354 aa8.02□□□□□ -1.13
NUP84YDL116W PBY1P38254 753 aa8.02□□□□□ -1.13
NUP84YDL116W MSH4P40965 878 aaPredicted RBP8.02□□□□□ -1.13
NUP84YDL116W YGL242CP53066 181 aa8.02□□□□□ -1.13
NUP84YDL116W THI12P42883 340 aa8.01□□□□□ -1.13
NUP84YDL116W THI5P43534 340 aa8.01□□□□□ -1.13
NUP84YDL116W THI11P47183 340 aa8.01□□□□□ -1.13
NUP84YDL116W DNM1P54861 757 aa8.01□□□□□ -1.13
NUP84YDL116W WAR1Q03631 944 aa8.01□□□□□ -1.13
NUP84YDL116W THI13Q07748 340 aa8.01□□□□□ -1.13
NUP84YDL116W TLG2Q08144 397 aa8.01□□□□□ -1.13
NUP84YDL116W SLM3Q12093 417 aa8.01□□□□□ -1.13
NUP84YDL116W QCR6P00127 147 aa8.01□□□□□ -1.13
NUP84YDL116W KTR1P27810 393 aaKnown RBP8.01□□□□□ -1.13
NUP84YDL116W MAL33P38157 468 aa8.01□□□□□ -1.13
NUP84YDL116W YMR147WP40218 223 aaKnown RBP8.01□□□□□ -1.13
NUP84YDL116W HPC2Q01448 625 aa8.01□□□□□ -1.13
NUP84YDL116W PET123P17558 318 aa8□□□□□ -1.13
NUP84YDL116W MRM1P25270 412 aa8□□□□□ -1.13
NUP84YDL116W CST6P40535 587 aa8□□□□□ -1.13
NUP84YDL116W JSN1P47135 1091 aaKnown RBP RIP-Chip data8□□□□□ -1.13not detected
NUP84YDL116W MLC1P53141 149 aa8□□□□□ -1.13
NUP84YDL116W TFB3Q03290 321 aa8□□□□□ -1.13
NUP84YDL116W RRB1Q04225 511 aaKnown RBP8□□□□□ -1.13
NUP84YDL116W RPN7Q06103 429 aaKnown RBP8□□□□□ -1.13
NUP84YDL116W ESF1Q06344 628 aaKnown RBP8□□□□□ -1.13
NUP84YDL116W HCA4P20448 770 aaKnown RBP7.99□□□□□ -1.13
NUP84YDL116W PSY4P38193 441 aa7.99□□□□□ -1.13
NUP84YDL116W RTT107P38850 1070 aa7.99□□□□□ -1.13
NUP84YDL116W PKH1Q03407 766 aa7.99□□□□□ -1.13
NUP84YDL116W MCM4P30665 933 aaKnown RBP7.98□□□□□ -1.13
NUP84YDL116W ADE16P54113 591 aaKnown RBP7.98□□□□□ -1.13
NUP84YDL116W MPE1P35728 441 aaKnown RBP7.98□□□□□ -1.13
NUP84YDL116W ELG1Q12050 791 aa7.98□□□□□ -1.13
NUP84YDL116W EPS1P40557 701 aa7.97□□□□□ -1.13
NUP84YDL116W TMA16Q08687 178 aa7.97□□□□□ -1.13
NUP84YDL116W GSY2P27472 705 aa7.97□□□□□ -1.13
NUP84YDL116W ELM1P32801 640 aa7.97□□□□□ -1.13
NUP84YDL116W CEP3P40969 608 aa7.97□□□□□ -1.13
NUP84YDL116W YNL193WP53870 558 aa7.97□□□□□ -1.13
NUP84YDL116W FRK1Q03002 865 aaPredicted RBP7.97□□□□□ -1.13
NUP84YDL116W YKL068W-AQ3E826 78 aa7.97□□□□□ -1.13
NUP84YDL116W DDP1Q99321 188 aaKnown RBP7.97□□□□□ -1.13
NUP84YDL116W HSP82P02829 709 aaKnown RBP7.96□□□□□ -1.14
NUP84YDL116W RRM3P38766 723 aa7.96□□□□□ -1.14
NUP84YDL116W CIN4P39110 191 aa7.96□□□□□ -1.14
NUP84YDL116W RGP1P16664 663 aa7.95□□□□□ -1.14
NUP84YDL116W CLB1P24868 471 aa7.95□□□□□ -1.14
NUP84YDL116W BUD6P41697 788 aa7.95□□□□□ -1.14
NUP84YDL116W UBP16Q02863 499 aa7.95□□□□□ -1.14
NUP84YDL116W GYL1Q04322 720 aa7.95□□□□□ -1.14
NUP84YDL116W TTI1P36097 1038 aa7.95□□□□□ -1.14
NUP84YDL116W TCD1P38756 429 aa7.95□□□□□ -1.14
NUP84YDL116W STR2P47164 639 aa7.95□□□□□ -1.14
NUP84YDL116W MEC3Q02574 474 aa7.95□□□□□ -1.14
NUP84YDL116W VPS60Q03390 229 aa7.95□□□□□ -1.14
NUP84YDL116W TUM1Q08686 304 aaKnown RBP7.95□□□□□ -1.14
NUP84YDL116W PSH1Q12161 406 aa7.95□□□□□ -1.14
NUP84YDL116W NOP14Q99207 810 aaKnown RBP7.95□□□□□ -1.14
NUP84YDL116W OSM1P21375 501 aaKnown RBP7.94□□□□□ -1.14
NUP84YDL116W DEP1P31385 405 aa7.94□□□□□ -1.14
NUP84YDL116W SMC3P47037 1230 aa7.94□□□□□ -1.14
NUP84YDL116W SEC9P40357 651 aa7.94□□□□□ -1.14
NUP84YDL116W REF2P42073 533 aaPredicted RBP7.94□□□□□ -1.14
NUP84YDL116W YGL140CP53120 1219 aa7.94□□□□□ -1.14
NUP84YDL116W ATF2P53296 535 aa7.94□□□□□ -1.14
NUP84YDL116W YPL150WQ12152 901 aa7.94□□□□□ -1.14
NUP84YDL116W TCB1Q12466 1186 aa7.94□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms