RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W YKL133CP36066 463 aa9.18□□□□□ -0.94
ABP1YCR088W ARP5P53946 755 aa9.18□□□□□ -0.94
ABP1YCR088W UBP16Q02863 499 aa9.18□□□□□ -0.94
ABP1YCR088W RPN7Q06103 429 aaKnown RBP9.18□□□□□ -0.94
ABP1YCR088W YPL150WQ12152 901 aa9.18□□□□□ -0.94
ABP1YCR088W MNR2P35724 969 aa9.17□□□□□ -0.94
ABP1YCR088W PBY1P38254 753 aa9.17□□□□□ -0.94
ABP1YCR088W SGD1Q06132 899 aa9.17□□□□□ -0.94
ABP1YCR088W SSP2Q08646 371 aa9.17□□□□□ -0.94
ABP1YCR088W ELG1Q12050 791 aa9.17□□□□□ -0.94
ABP1YCR088W TFC8Q12308 588 aa9.17□□□□□ -0.94
ABP1YCR088W GYP5Q12344 894 aa9.17□□□□□ -0.94
ABP1YCR088W RIM15P43565 1770 aa9.17□□□□□ -0.94
ABP1YCR088W MFT1P33441 392 aaKnown RBP9.17□□□□□ -0.94
ABP1YCR088W TTI1P36097 1038 aa9.17□□□□□ -0.94
ABP1YCR088W MAL33P38157 468 aa9.17□□□□□ -0.94
ABP1YCR088W TPM2P40414 161 aa9.17□□□□□ -0.94
ABP1YCR088W ENT1Q12518 454 aa9.17□□□□□ -0.94
ABP1YCR088W DDP1Q99321 188 aaKnown RBP9.17□□□□□ -0.94
ABP1YCR088W GPA1P08539 472 aa9.16□□□□□ -0.94
ABP1YCR088W SEC18P18759 758 aaKnown RBP9.16□□□□□ -0.94
ABP1YCR088W VMS1Q04311 632 aaKnown RBP9.16□□□□□ -0.94
ABP1YCR088W MRPL32P25348 183 aa9.15□□□□□ -0.94
ABP1YCR088W FYV10P40492 516 aa9.15□□□□□ -0.94
ABP1YCR088W YNL193WP53870 558 aa9.15□□□□□ -0.94
ABP1YCR088W CTI6Q08923 506 aa9.15□□□□□ -0.94
ABP1YCR088W STU2P46675 888 aa9.14□□□□□ -0.95
ABP1YCR088W TAF13P11747 167 aa9.14□□□□□ -0.95
ABP1YCR088W YER130CP39959 443 aa9.14□□□□□ -0.95
ABP1YCR088W HOS3Q02959 697 aaKnown RBP9.14□□□□□ -0.95
ABP1YCR088W MTC5Q03897 1148 aa9.14□□□□□ -0.95
ABP1YCR088W FBP26P32604 452 aa9.13□□□□□ -0.95
ABP1YCR088W RFC5P38251 354 aa9.13□□□□□ -0.95
ABP1YCR088W PSK2Q08217 1101 aa9.13□□□□□ -0.95
ABP1YCR088W LAM4P38800 1345 aa9.12□□□□□ -0.95
ABP1YCR088W TPM1P17536 199 aaKnown RBP9.12□□□□□ -0.95
ABP1YCR088W IMP2'P32351 346 aa9.12□□□□□ -0.95
ABP1YCR088W YHL017WP38745 532 aa9.12□□□□□ -0.95
ABP1YCR088W YMR147WP40218 223 aaKnown RBP9.12□□□□□ -0.95
ABP1YCR088W ECM23Q02710 187 aa9.12□□□□□ -0.95
ABP1YCR088W ETT1Q08421 412 aaKnown RBP9.12□□□□□ -0.95
ABP1YCR088W MATALPHA2P0CY08 210 aa9.12□□□□□ -0.95
ABP1YCR088W HMLALPHA2P0CY09 210 aa9.12□□□□□ -0.95
ABP1YCR088W SRP40P32583 406 aaPredicted RBP9.12□□□□□ -0.95
ABP1YCR088W RPN1P38764 993 aaKnown RBP9.12□□□□□ -0.95
ABP1YCR088W YGL082WP53155 381 aa9.12□□□□□ -0.95
ABP1YCR088W YLR407WQ06070 228 aa9.12□□□□□ -0.95
ABP1YCR088W ENV9Q08651 330 aa9.12□□□□□ -0.95
ABP1YCR088W PEP3P27801 918 aa9.11□□□□□ -0.95
ABP1YCR088W EPL1P43572 832 aa9.11□□□□□ -0.95
ABP1YCR088W YKE2P52553 114 aa9.11□□□□□ -0.95
ABP1YCR088W PKH3Q03306 898 aaPredicted RBP9.1□□□□□ -0.95
ABP1YCR088W PHM7Q12252 991 aa9.1□□□□□ -0.95
ABP1YCR088W SNU66Q12420 587 aaPredicted RBP9.1□□□□□ -0.95
ABP1YCR088W BUD6P41697 788 aa9.09□□□□□ -0.95
ABP1YCR088W BBC1P47068 1157 aa9.09□□□□□ -0.95
ABP1YCR088W YPT11P48559 417 aa9.09□□□□□ -0.95
ABP1YCR088W ESF1Q06344 628 aaKnown RBP9.09□□□□□ -0.95
ABP1YCR088W COBP00163 385 aa9.09□□□□□ -0.95
ABP1YCR088W OPI1P21957 404 aa9.09□□□□□ -0.95
ABP1YCR088W FAS2P19097 1887 aaKnown RBP9.08□□□□□ -0.96
ABP1YCR088W GSY2P27472 705 aa9.08□□□□□ -0.96
ABP1YCR088W OSH3P38713 996 aaKnown RBP9.08□□□□□ -0.96
ABP1YCR088W RRM3P38766 723 aa9.08□□□□□ -0.96
ABP1YCR088W APP1P53933 587 aa9.08□□□□□ -0.96
ABP1YCR088W WAR1Q03631 944 aa9.08□□□□□ -0.96
ABP1YCR088W MCM4P30665 933 aaKnown RBP9.07□□□□□ -0.96
ABP1YCR088W CTH1P47976 325 aa9.07□□□□□ -0.96
ABP1YCR088W SFI1Q12369 946 aa9.07□□□□□ -0.96
ABP1YCR088W SUP35P05453 685 aaKnown RBP9.07□□□□□ -0.96
ABP1YCR088W NOC2P39744 710 aaKnown RBP9.07□□□□□ -0.96
ABP1YCR088W SER1P33330 395 aaKnown RBP9.06□□□□□ -0.96
ABP1YCR088W PSY4P38193 441 aa9.06□□□□□ -0.96
ABP1YCR088W HAL5P38970 855 aaKnown RBP9.06□□□□□ -0.96
ABP1YCR088W CEP3P40969 608 aa9.05□□□□□ -0.96
ABP1YCR088W MSB4Q12317 492 aa9.05□□□□□ -0.96
ABP1YCR088W ADR1P07248 1323 aa9.05□□□□□ -0.96
ABP1YCR088W SAC3P46674 1301 aa9.05□□□□□ -0.96
ABP1YCR088W LTV1P34078 463 aa9.04□□□□□ -0.96
ABP1YCR088W ALD3P54114 506 aa9.04□□□□□ -0.96
ABP1YCR088W FOX2Q02207 900 aaKnown RBP9.04□□□□□ -0.96
ABP1YCR088W SRC1Q03707 834 aa9.04□□□□□ -0.96
ABP1YCR088W HSP82P02829 709 aaKnown RBP9.04□□□□□ -0.96
ABP1YCR088W GRX1P25373 110 aaKnown RBP9.04□□□□□ -0.96
ABP1YCR088W YKR023WP36119 530 aaKnown RBP9.04□□□□□ -0.96
ABP1YCR088W YKR075CP36155 307 aa9.04□□□□□ -0.96
ABP1YCR088W RFT1P38206 574 aaPredicted RBP9.04□□□□□ -0.96
ABP1YCR088W DOT5P40553 215 aa9.04□□□□□ -0.96
ABP1YCR088W RRI2Q12348 645 aa9.04□□□□□ -0.96
ABP1YCR088W HAA1Q12753 694 aaKnown RBP9.04□□□□□ -0.96
ABP1YCR088W HCA4P20448 770 aaKnown RBP9.03□□□□□ -0.96
ABP1YCR088W SKI2P35207 1287 aaKnown RBP RIP-Chip data9.03□□□□□ -0.96not detected
ABP1YCR088W TCD1P38756 429 aa9.03□□□□□ -0.96
ABP1YCR088W KAR5Q04746 504 aa9.03□□□□□ -0.96
ABP1YCR088W PGI1P12709 554 aaKnown RBP9.02□□□□□ -0.97
ABP1YCR088W RGP1P16664 663 aa9.02□□□□□ -0.97
ABP1YCR088W MET1P36150 593 aa9.02□□□□□ -0.97
ABP1YCR088W YCK3P39962 524 aa9.02□□□□□ -0.97
ABP1YCR088W OSW7P43611 510 aa9.02□□□□□ -0.97
ABP1YCR088W JSN1P47135 1091 aaKnown RBP RIP-Chip data9.02□□□□□ -0.97not detected
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms