RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	UBX7	P38349	436 aa		5.24	□□□□□ -1.57
CMD1	YBR109C	NOP8	Q08287	484 aa	Predicted RBP	5.24	□□□□□ -1.57
CMD1	YBR109C	PGM2	P37012	569 aa	Known RBP	5.23	□□□□□ -1.57
CMD1	YBR109C	ACS2	P52910	683 aa	Known RBP	5.23	□□□□□ -1.57
CMD1	YBR109C	RPP1A	P05318	106 aa	Predicted RBP	5.22	□□□□□ -1.57
CMD1	YBR109C	HAP4	P14064	554 aa		5.22	□□□□□ -1.57
CMD1	YBR109C	ALG14	P38242	237 aa		5.22	□□□□□ -1.57
CMD1	YBR109C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.22	□□□□□ -1.57	not detected
CMD1	YBR109C	TSC13	Q99190	310 aa		5.22	□□□□□ -1.57
CMD1	YBR109C	TRP3	P00937	484 aa		5.21	□□□□□ -1.58
CMD1	YBR109C	ROM1	P53046	1155 aa		5.21	□□□□□ -1.58
CMD1	YBR109C	HDA3	Q06623	655 aa		5.21	□□□□□ -1.58
CMD1	YBR109C	PDI1	P17967	522 aa	Known RBP	5.2	□□□□□ -1.58
CMD1	YBR109C	LIP5	P32875	414 aa		5.2	□□□□□ -1.58
CMD1	YBR109C	ARI1	P53111	347 aa	Known RBP	5.2	□□□□□ -1.58
CMD1	YBR109C	GAS4	Q08271	471 aa		5.2	□□□□□ -1.58
CMD1	YBR109C	RPS31	P05759	152 aa	Known RBP	5.19	□□□□□ -1.58
CMD1	YBR109C	LEU1	P07264	779 aa	Known RBP	5.19	□□□□□ -1.58
CMD1	YBR109C	SAC7	P17121	654 aa		5.19	□□□□□ -1.58
CMD1	YBR109C	SSF1	P38789	453 aa	Predicted RBP	5.19	□□□□□ -1.58
CMD1	YBR109C	AIM9	P40053	627 aa	Known RBP	5.19	□□□□□ -1.58
CMD1	YBR109C	YFL034W	P43564	1073 aa		5.19	□□□□□ -1.58
CMD1	YBR109C	CWC15	Q03772	175 aa	Known RBP	5.19	□□□□□ -1.58
CMD1	YBR109C	GIS1	Q03833	894 aa		5.19	□□□□□ -1.58
CMD1	YBR109C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
CMD1	YBR109C	CTH1	P47976	325 aa		5.18	□□□□□ -1.58
CMD1	YBR109C	PUF6	Q04373	656 aa	Known RBP	5.18	□□□□□ -1.58
CMD1	YBR109C	HAT1	Q12341	374 aa		5.18	□□□□□ -1.58
CMD1	YBR109C	NTH2	P35172	780 aa		5.17	□□□□□ -1.58
CMD1	YBR109C	KAE1	P36132	386 aa		5.17	□□□□□ -1.58
CMD1	YBR109C	TOS1	P38288	455 aa		5.17	□□□□□ -1.58
CMD1	YBR109C	UBP5	P39944	805 aa		5.17	□□□□□ -1.58
CMD1	YBR109C	SGS1	P35187	1447 aa		5.16	□□□□□ -1.58
CMD1	YBR109C	COQ2	P32378	372 aa		5.16	□□□□□ -1.58
CMD1	YBR109C	GAS5	Q08193	484 aa		5.16	□□□□□ -1.58
CMD1	YBR109C	RPS6A	P0CX37	236 aa	Known RBP	5.15	□□□□□ -1.59
CMD1	YBR109C	RPS6B	P0CX38	236 aa	Predicted RBP	5.15	□□□□□ -1.59
CMD1	YBR109C	VAN1	P23642	535 aa		5.15	□□□□□ -1.59
CMD1	YBR109C	YLR122C	Q12312	125 aa		5.15	□□□□□ -1.59
CMD1	YBR109C	SRS2	P12954	1174 aa		5.14	□□□□□ -1.59
CMD1	YBR109C	NAR1	P23503	491 aa	Known RBP	5.14	□□□□□ -1.59
CMD1	YBR109C	UBP1	P25037	809 aa		5.14	□□□□□ -1.59
CMD1	YBR109C	ALD2	P47771	506 aa		5.14	□□□□□ -1.59
CMD1	YBR109C	PUN1	Q06991	263 aa		5.14	□□□□□ -1.59
CMD1	YBR109C	CYT1	P07143	309 aa		5.13	□□□□□ -1.59
CMD1	YBR109C	SWI5	P08153	709 aa		5.13	□□□□□ -1.59
CMD1	YBR109C	SUV3	P32580	737 aa		5.13	□□□□□ -1.59
CMD1	YBR109C	SFA1	P32771	386 aa		5.13	□□□□□ -1.59
CMD1	YBR109C	SEN54	Q02825	467 aa	Predicted RBP	5.13	□□□□□ -1.59
CMD1	YBR109C	GIS4	Q04233	774 aa		5.13	□□□□□ -1.59
CMD1	YBR109C	KAR5	Q04746	504 aa		5.13	□□□□□ -1.59
CMD1	YBR109C	PNP1	Q05788	311 aa		5.13	□□□□□ -1.59
CMD1	YBR109C	BRE4	Q07660	1125 aa		5.13	□□□□□ -1.59
CMD1	YBR109C	TRS33	Q99394	268 aa		5.13	□□□□□ -1.59
CMD1	YBR109C	SPA2	P23201	1466 aa	Known RBP	5.13	□□□□□ -1.59
CMD1	YBR109C	INO80	P53115	1489 aa		5.13	□□□□□ -1.59
CMD1	YBR109C	RGP1	P16664	663 aa		5.12	□□□□□ -1.59
CMD1	YBR109C	SLD2	P34252	453 aa		5.12	□□□□□ -1.59
CMD1	YBR109C	YBL113C	Q7M4S9	792 aa		5.12	□□□□□ -1.59
CMD1	YBR109C	RRM3	P38766	723 aa		5.11	□□□□□ -1.59
CMD1	YBR109C	ERP5	P38819	212 aa		5.11	□□□□□ -1.59
CMD1	YBR109C	BOL3	P39724	118 aa		5.11	□□□□□ -1.59
CMD1	YBR109C	PRK1	P40494	810 aa		5.11	□□□□□ -1.59
CMD1	YBR109C	ALD4	P46367	519 aa	Known RBP	5.11	□□□□□ -1.59
CMD1	YBR109C	HEH2	Q03281	663 aa		5.11	□□□□□ -1.59
CMD1	YBR109C	TRL1	P09880	827 aa	Known RBP	5.1	□□□□□ -1.59
CMD1	YBR109C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.1	□□□□□ -1.59	not detected
CMD1	YBR109C	NGR1	P32831	672 aa	Known RBP	5.1	□□□□□ -1.59
CMD1	YBR109C	YPQ2	Q06328	317 aa		5.1	□□□□□ -1.59
CMD1	YBR109C	CWH41	P53008	833 aa		5.09	□□□□□ -1.59
CMD1	YBR109C	YCR015C	P25616	317 aa		5.08	□□□□□ -1.6
CMD1	YBR109C	STM1	P39015	273 aa	Known RBP	5.08	□□□□□ -1.6
CMD1	YBR109C	ATG1	P53104	897 aa		5.08	□□□□□ -1.6
CMD1	YBR109C	MAG2	Q06436	670 aa	Known RBP	5.08	□□□□□ -1.6
CMD1	YBR109C	FUR4	P05316	633 aa	Known RBP	5.07	□□□□□ -1.6
CMD1	YBR109C	RNQ1	P25367	405 aa		5.07	□□□□□ -1.6
CMD1	YBR109C	GRS1	P38088	690 aa	Known RBP	5.07	□□□□□ -1.6
CMD1	YBR109C	MDJ2	P42834	146 aa		5.07	□□□□□ -1.6
CMD1	YBR109C	MCM1	P11746	286 aa		5.06	□□□□□ -1.6
CMD1	YBR109C	RRN6	P32786	894 aa		5.06	□□□□□ -1.6
CMD1	YBR109C	BOI1	P38041	980 aa	Known RBP	5.06	□□□□□ -1.6
CMD1	YBR109C	YBR197C	P38306	217 aa		5.06	□□□□□ -1.6
CMD1	YBR109C	LSO1	Q3E827	93 aa		5.06	□□□□□ -1.6
CMD1	YBR109C	HXT5	P38695	592 aa		5.05	□□□□□ -1.6
CMD1	YBR109C	IPL1	P38991	367 aa		5.05	□□□□□ -1.6
CMD1	YBR109C	QDR1	P40475	563 aa		5.05	□□□□□ -1.6
CMD1	YBR109C	CAB1	Q04430	367 aa		5.05	□□□□□ -1.6
CMD1	YBR109C	HEM3	P28789	327 aa		5.04	□□□□□ -1.6
CMD1	YBR109C	ISC10	P32645	267 aa		5.04	□□□□□ -1.6
CMD1	YBR109C	YKL222C	P35995	705 aa		5.04	□□□□□ -1.6
CMD1	YBR109C	SAF1	P38352	637 aa		5.04	□□□□□ -1.6
CMD1	YBR109C	GLO3	P38682	493 aa	Known RBP	5.04	□□□□□ -1.6
CMD1	YBR109C	YHL050C	P38721	697 aa		5.04	□□□□□ -1.6
CMD1	YBR109C	YHR219W	P38900	624 aa		5.04	□□□□□ -1.6
CMD1	YBR109C	ACF4	P47129	309 aa		5.04	□□□□□ -1.6
CMD1	YBR109C	YGR130C	P53278	816 aa		5.04	□□□□□ -1.6
CMD1	YBR109C	FOX2	Q02207	900 aa	Known RBP	5.04	□□□□□ -1.6
CMD1	YBR109C	MSC6	Q08818	692 aa	Known RBP	5.04	□□□□□ -1.6
CMD1	YBR109C	CHS2	P14180	963 aa		5.03	□□□□□ -1.6
CMD1	YBR109C	SEC20	P28791	383 aa		5.03	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 79.1 ms