RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C BSD2P38356 321 aa8.55□□□□□ -1.04
LDB7YBL006C PNT1P38969 423 aa8.55□□□□□ -1.04
LDB7YBL006C BOI2P39969 1040 aa8.55□□□□□ -1.04
LDB7YBL006C MTC3P53077 123 aa8.55□□□□□ -1.04
LDB7YBL006C SRC1Q03707 834 aa8.55□□□□□ -1.04
LDB7YBL006C CSR2Q12734 1121 aa8.55□□□□□ -1.04
LDB7YBL006C VPS13Q07878 3144 aa8.55□□□□□ -1.04
LDB7YBL006C ADR1P07248 1323 aa8.54□□□□□ -1.04
LDB7YBL006C RPL17AP05740 184 aaKnown RBP8.54□□□□□ -1.04
LDB7YBL006C YPP1P46951 817 aa8.54□□□□□ -1.04
LDB7YBL006C RPL17BP46990 184 aaKnown RBP8.54□□□□□ -1.04
LDB7YBL006C PCS60P38137 543 aaKnown RBP RIP-Chip data8.53□□□□□ -1.04not detected
LDB7YBL006C RRT6P53117 311 aaPredicted RBP8.53□□□□□ -1.04
LDB7YBL006C ACK1Q07622 623 aaPredicted RBP8.53□□□□□ -1.04
LDB7YBL006C NOP8Q08287 484 aaPredicted RBP8.53□□□□□ -1.04
LDB7YBL006C WRS1Q12109 432 aaKnown RBP8.53□□□□□ -1.04
LDB7YBL006C CSI1Q04368 295 aa8.52□□□□□ -1.05
LDB7YBL006C CST9Q06032 482 aa8.52□□□□□ -1.05
LDB7YBL006C SNU66Q12420 587 aaPredicted RBP8.52□□□□□ -1.05
LDB7YBL006C SUP35P05453 685 aaKnown RBP8.51□□□□□ -1.05
LDB7YBL006C NUG1P40010 520 aaKnown RBP8.51□□□□□ -1.05
LDB7YBL006C VPS27P40343 622 aaKnown RBP8.51□□□□□ -1.05
LDB7YBL006C YJL171CP46992 396 aa8.51□□□□□ -1.05
LDB7YBL006C JJJ2P46997 583 aa8.51□□□□□ -1.05
LDB7YBL006C PSF3Q12146 194 aa8.51□□□□□ -1.05
LDB7YBL006C RPS19AP07280 144 aaKnown RBP8.5□□□□□ -1.05
LDB7YBL006C RPS19BP07281 144 aaPredicted RBP8.5□□□□□ -1.05
LDB7YBL006C MOT2P34909 587 aaKnown RBP8.5□□□□□ -1.05
LDB7YBL006C SDH2P21801 266 aa8.49□□□□□ -1.05
LDB7YBL006C RPT3P33298 428 aaKnown RBP8.49□□□□□ -1.05
LDB7YBL006C MAK21Q12176 1025 aaKnown RBP8.49□□□□□ -1.05
LDB7YBL006C APE3P37302 537 aaKnown RBP8.48□□□□□ -1.05
LDB7YBL006C NIT1P40447 199 aa8.48□□□□□ -1.05
LDB7YBL006C FLO1P32768 1537 aa8.48□□□□□ -1.05
LDB7YBL006C SLA1P32790 1244 aa8.47□□□□□ -1.05
LDB7YBL006C GLO3P38682 493 aaKnown RBP8.47□□□□□ -1.05
LDB7YBL006C YFH7P43591 353 aa8.47□□□□□ -1.05
LDB7YBL006C NCS6P53088 359 aa8.47□□□□□ -1.05
LDB7YBL006C CDC45Q08032 650 aa8.47□□□□□ -1.05
LDB7YBL006C AVT3P36062 692 aa8.46□□□□□ -1.06
LDB7YBL006C RBA50Q04418 439 aa8.46□□□□□ -1.06
LDB7YBL006C GAL2P13181 574 aa8.45□□□□□ -1.06
LDB7YBL006C SEC18P18759 758 aaKnown RBP8.45□□□□□ -1.06
LDB7YBL006C RSC30P38781 883 aa8.45□□□□□ -1.06
LDB7YBL006C PUS6P53294 404 aa8.45□□□□□ -1.06
LDB7YBL006C GYP5Q12344 894 aa8.45□□□□□ -1.06
LDB7YBL006C SNF3P10870 884 aa8.44□□□□□ -1.06
LDB7YBL006C YIR042CP40586 236 aa8.44□□□□□ -1.06
LDB7YBL006C RVB2Q12464 471 aaKnown RBP8.44□□□□□ -1.06
LDB7YBL006C AI2P03876 854 aa8.43□□□□□ -1.06
LDB7YBL006C KEL1P38853 1164 aaKnown RBP8.43□□□□□ -1.06
LDB7YBL006C YIL092WP40497 633 aa8.43□□□□□ -1.06
LDB7YBL006C NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.43□□□□□ -1.06not detected
LDB7YBL006C TAO3P40468 2376 aa8.43□□□□□ -1.06
LDB7YBL006C PFK2P16862 959 aaKnown RBP RIP-Chip data8.42□□□□□ -1.06not detected
LDB7YBL006C PTK1P36002 662 aaPredicted RBP8.42□□□□□ -1.06
LDB7YBL006C HAL5P38970 855 aaKnown RBP8.42□□□□□ -1.06
LDB7YBL006C APL6P46682 809 aa8.42□□□□□ -1.06
LDB7YBL006C YNL193WP53870 558 aa8.42□□□□□ -1.06
LDB7YBL006C PIB1Q06651 286 aa8.42□□□□□ -1.06
LDB7YBL006C PPM2Q08282 695 aa8.42□□□□□ -1.06
LDB7YBL006C RAD53P22216 821 aa8.41□□□□□ -1.06
LDB7YBL006C SSF1P38789 453 aaPredicted RBP8.41□□□□□ -1.06
LDB7YBL006C NSG2P53898 299 aa8.41□□□□□ -1.06
LDB7YBL006C PEX29Q03370 554 aa8.41□□□□□ -1.06
LDB7YBL006C INM2Q05533 292 aa8.41□□□□□ -1.06
LDB7YBL006C GIN4Q12263 1142 aa8.41□□□□□ -1.06
LDB7YBL006C DAL5P15365 543 aa8.4□□□□□ -1.06
LDB7YBL006C GCD7P32502 381 aaPredicted RBP8.4□□□□□ -1.06
LDB7YBL006C ASH1P34233 588 aa8.4□□□□□ -1.06
LDB7YBL006C YRB30P53107 440 aaPredicted RBP8.4□□□□□ -1.06
LDB7YBL006C RPN7Q06103 429 aaKnown RBP8.4□□□□□ -1.06
LDB7YBL006C PIF1P07271 859 aa8.39□□□□□ -1.07
LDB7YBL006C MAC1P35192 417 aa8.39□□□□□ -1.07
LDB7YBL006C ILV3P39522 585 aaKnown RBP8.39□□□□□ -1.07
LDB7YBL006C SPO1P53541 631 aa8.39□□□□□ -1.07
LDB7YBL006C JIP4Q03361 876 aa8.39□□□□□ -1.07
LDB7YBL006C RRI2Q12348 645 aa8.39□□□□□ -1.07
LDB7YBL006C ADP1P25371 1049 aa8.38□□□□□ -1.07
LDB7YBL006C MDL2P33311 773 aa8.38□□□□□ -1.07
LDB7YBL006C TPS3P38426 1054 aaKnown RBP8.38□□□□□ -1.07
LDB7YBL006C YNG2P38806 282 aaKnown RBP8.38□□□□□ -1.07
LDB7YBL006C HGH1P48362 394 aaKnown RBP8.38□□□□□ -1.07
LDB7YBL006C SGD1Q06132 899 aa8.38□□□□□ -1.07
LDB7YBL006C PMA1P05030 918 aaKnown RBP8.37□□□□□ -1.07
LDB7YBL006C PAM1P37304 830 aaKnown RBP8.37□□□□□ -1.07
LDB7YBL006C YLR225CQ05948 407 aaKnown RBP8.37□□□□□ -1.07
LDB7YBL006C SPR3P41901 512 aa8.36□□□□□ -1.07
LDB7YBL006C YPR117WQ06116 2489 aa8.36□□□□□ -1.07
LDB7YBL006C CYB2P00175 591 aa8.34□□□□□ -1.07
LDB7YBL006C TUB2P02557 457 aaKnown RBP8.34□□□□□ -1.07
LDB7YBL006C BOI1P38041 980 aaKnown RBP8.34□□□□□ -1.07
LDB7YBL006C GRX7P38068 203 aa8.34□□□□□ -1.07
LDB7YBL006C KTR3P38130 404 aaPredicted RBP8.34□□□□□ -1.07
LDB7YBL006C MSH4P40965 878 aaPredicted RBP8.34□□□□□ -1.07
LDB7YBL006C PCL8Q08966 492 aa8.34□□□□□ -1.07
LDB7YBL006C ERG7P38604 731 aa8.33□□□□□ -1.08
LDB7YBL006C ACA1P39970 489 aa8.33□□□□□ -1.08
LDB7YBL006C NOP2P40991 618 aaKnown RBP8.33□□□□□ -1.08
LDB7YBL006C KIN1P13185 1064 aa8.32□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms