RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 C1orf167Q5SNV9 1468 aa25.01■■□□□ 1.59
PHGDH-227ENST00000641811 PHLPP1O60346 1717 aa25■■□□□ 1.59
PHGDH-227ENST00000641811 CDC42BPGQ6DT37 1551 aa24.98■■□□□ 1.59
PHGDH-227ENST00000641811 DLC1Q96QB1 1528 aa24.98■■□□□ 1.59
PHGDH-227ENST00000641811 NBPF1Q3BBV0 1214 aa24.98■■□□□ 1.59
PHGDH-227ENST00000641811 ORAI2Q96SN7 254 aa24.98■■□□□ 1.59
PHGDH-227ENST00000641811 POGKQ9P215 609 aa24.98■■□□□ 1.59
PHGDH-227ENST00000641811 DISP3Q9P2K9 1392 aa24.97■■□□□ 1.59
PHGDH-227ENST00000641811 NUTM2FA1L443 756 aa24.97■■□□□ 1.59
PHGDH-227ENST00000641811 DDX17Q92841 729 aaKnown RBP24.97■■□□□ 1.59
PHGDH-227ENST00000641811 COL16A1Q07092 1604 aaPredicted RBP24.95■■□□□ 1.58
PHGDH-227ENST00000641811 AHDC1Q5TGY3 1603 aaPredicted RBP24.95■■□□□ 1.58
PHGDH-227ENST00000641811 KIAA1210Q9ULL0 1709 aa24.93■■□□□ 1.58
PHGDH-227ENST00000641811 MED1Q15648 1581 aaPredicted RBP24.93■■□□□ 1.58
PHGDH-227ENST00000641811 HIRIP3Q9BW71 556 aaPredicted RBP24.91■■□□□ 1.58
PHGDH-227ENST00000641811 MINK1Q8N4C8 1332 aaPredicted RBP24.9■■□□□ 1.58
PHGDH-227ENST00000641811 ESCO1Q5FWF5 840 aa24.9■■□□□ 1.58
PHGDH-227ENST00000641811 NHSL1Q5SYE7 1610 aa24.89■■□□□ 1.57
PHGDH-227ENST00000641811 FMN2Q9NZ56 1722 aa24.89■■□□□ 1.57
PHGDH-227ENST00000641811 ARHGEF28Q8N1W1 1705 aaKnown RBP24.88■■□□□ 1.57
PHGDH-227ENST00000641811 JCADQ9P266 1359 aa24.88■■□□□ 1.57
PHGDH-227ENST00000641811 NBPF8Q3BBV2 869 aa24.87■■□□□ 1.57
PHGDH-227ENST00000641811 TONSLQ96HA7 1378 aa24.87■■□□□ 1.57
PHGDH-227ENST00000641811 TRPM1Q7Z4N2 1603 aa24.83■■□□□ 1.57
PHGDH-227ENST00000641811 ADGRB2O60241 1585 aa24.83■■□□□ 1.57
PHGDH-227ENST00000641811 FOXO3O43524 673 aa24.81■■□□□ 1.56
PHGDH-227ENST00000641811 LRRC59Q96AG4 307 aaKnown RBP24.81■■□□□ 1.56
PHGDH-227ENST00000641811 XPCQ01831 940 aaPredicted RBP24.8■■□□□ 1.56
PHGDH-227ENST00000641811 SOS2Q07890 1332 aaPredicted RBP24.8■■□□□ 1.56
PHGDH-227ENST00000641811 RGPD8O14715 1765 aaPredicted RBP24.8■■□□□ 1.56
PHGDH-227ENST00000641811 WASLO00401 505 aaPredicted RBP24.79■■□□□ 1.56
PHGDH-227ENST00000641811 ROCK2O75116 1388 aaKnown RBP24.79■■□□□ 1.56
PHGDH-227ENST00000641811 SHPRHQ149N8 1683 aa24.78■■□□□ 1.56
PHGDH-227ENST00000641811 USP32Q8NFA0 1604 aa24.77■■□□□ 1.56
PHGDH-227ENST00000641811 PHF23Q9BUL5 403 aaPredicted RBP24.77■■□□□ 1.56
PHGDH-227ENST00000641811 NPHP3Q7Z494 1330 aa24.77■■□□□ 1.56
PHGDH-227ENST00000641811 PRR36Q9H6K5 1346 aa24.77■■□□□ 1.56
PHGDH-227ENST00000641811 PHF8Q9UPP1 1060 aa24.76■■□□□ 1.55
PHGDH-227ENST00000641811 ILDR2Q71H61 639 aa24.75■■□□□ 1.55
PHGDH-227ENST00000641811 SPATA31A6Q5VVP1 1343 aa24.75■■□□□ 1.55
PHGDH-227ENST00000641811 CENPJQ9HC77 1338 aaPredicted RBP24.75■■□□□ 1.55
PHGDH-227ENST00000641811 PNPLA6Q8IY17 1366 aa24.75■■□□□ 1.55
PHGDH-227ENST00000641811 ANKARQ7Z5J8 1434 aa24.75■■□□□ 1.55
PHGDH-227ENST00000641811 PXDNQ92626 1479 aa24.75■■□□□ 1.55
PHGDH-227ENST00000641811 NUTM2BA6NNL0 878 aaPredicted RBP24.74■■□□□ 1.55
PHGDH-227ENST00000641811 NUTM2EB1AL46 878 aaPredicted RBP24.74■■□□□ 1.55
PHGDH-227ENST00000641811 NUTM2AQ8IVF1 878 aaPredicted RBP24.74■■□□□ 1.55
PHGDH-227ENST00000641811 LRP6O75581 1613 aa24.74■■□□□ 1.55
PHGDH-227ENST00000641811 TULP4Q9NRJ4 1543 aa24.73■■□□□ 1.55
PHGDH-227ENST00000641811 PMFBP1Q8TBY8 1022 aa24.73■■□□□ 1.55
PHGDH-227ENST00000641811 CDK19Q9BWU1 502 aa24.73■■□□□ 1.55
PHGDH-227ENST00000641811 KIF1AQ12756 1690 aa24.72■■□□□ 1.55
PHGDH-227ENST00000641811 EIF3AQ14152 1382 aaKnown RBP24.7■■□□□ 1.55
PHGDH-227ENST00000641811 GPRASP1Q5JY77 1395 aa24.7■■□□□ 1.55
PHGDH-227ENST00000641811 KRT28Q7Z3Y7 464 aa24.7■■□□□ 1.54
PHGDH-227ENST00000641811 RGS17Q9UGC6 210 aaPredicted RBP24.7■■□□□ 1.54
PHGDH-227ENST00000641811 NUDT16Q96DE0 195 aaKnown RBP24.69■■□□□ 1.54
PHGDH-227ENST00000641811 CLSPNQ9HAW4 1339 aa24.68■■□□□ 1.54
PHGDH-227ENST00000641811 CCER1Q8TC90 406 aaPredicted RBP24.68■■□□□ 1.54
PHGDH-227ENST00000641811 CARD11Q9BXL7 1154 aa24.68■■□□□ 1.54
PHGDH-227ENST00000641811 RALGAPBQ86X10 1494 aa24.68■■□□□ 1.54
PHGDH-227ENST00000641811 QRICH2Q9H0J4 1663 aa24.68■■□□□ 1.54
PHGDH-227ENST00000641811 ATP7BP35670 1465 aa24.67■■□□□ 1.54
PHGDH-227ENST00000641811 MEX3CQ5U5Q3 659 aaKnown RBP24.67■■□□□ 1.54
PHGDH-227ENST00000641811 PSME1Q06323 249 aa24.66■■□□□ 1.54
PHGDH-227ENST00000641811 SPATA31A3Q5VYP0 1347 aa24.63■■□□□ 1.53
PHGDH-227ENST00000641811 SRPK2P78362 688 aaKnown RBP24.63■■□□□ 1.53
PHGDH-227ENST00000641811 CABP2Q9NPB3 220 aa24.63■■□□□ 1.53
PHGDH-227ENST00000641811 NGDNQ8NEJ9 315 aaKnown RBP24.61■■□□□ 1.53
PHGDH-227ENST00000641811 ADAMTS2O95450 1211 aa24.6■■□□□ 1.53
PHGDH-227ENST00000641811 COL22A1Q8NFW1 1626 aaPredicted RBP24.6■■□□□ 1.53
PHGDH-227ENST00000641811 POTEAQ6S8J7 498 aa24.59■■□□□ 1.53
PHGDH-227ENST00000641811 CCDC61Q9Y6R9 512 aa24.59■■□□□ 1.53
PHGDH-227ENST00000641811 ITSN1Q15811 1721 aa24.58■■□□□ 1.53
PHGDH-227ENST00000641811 LMOD2Q6P5Q4 547 aa24.58■■□□□ 1.53
PHGDH-227ENST00000641811 TNS3Q68CZ2 1445 aa24.58■■□□□ 1.53
PHGDH-227ENST00000641811 SBNO1A3KN83 1393 aa24.57■■□□□ 1.52
PHGDH-227ENST00000641811 TOPAZ1Q8N9V7 1692 aa24.57■■□□□ 1.52
PHGDH-227ENST00000641811 PLEKHG5O94827 1062 aa24.57■■□□□ 1.52
PHGDH-227ENST00000641811 TIMELESSQ9UNS1 1208 aa24.57■■□□□ 1.52
PHGDH-227ENST00000641811 EVC2Q86UK5 1308 aa24.57■■□□□ 1.52
PHGDH-227ENST00000641811 C8orf37Q96NL8 207 aa24.56■■□□□ 1.52
PHGDH-227ENST00000641811 PLEKHG3A1L390 1219 aa24.55■■□□□ 1.52
PHGDH-227ENST00000641811 ACEP12821 1306 aa24.55■■□□□ 1.52
PHGDH-227ENST00000641811 TRPM3Q9HCF6 1732 aaPredicted RBP24.54■■□□□ 1.52
PHGDH-227ENST00000641811 PPIP5K1Q6PFW1 1433 aa24.53■■□□□ 1.52
PHGDH-227ENST00000641811 CABLES1Q8TDN4 633 aa24.53■■□□□ 1.52
PHGDH-227ENST00000641811 AFF2P51816 1311 aa24.53■■□□□ 1.52
PHGDH-227ENST00000641811 PAK3O75914 559 aaPredicted RBP24.52■■□□□ 1.52
PHGDH-227ENST00000641811 POLR3AO14802 1390 aaPredicted RBP24.52■■□□□ 1.52
PHGDH-227ENST00000641811 NGLY1Q96IV0 654 aa24.51■■□□□ 1.51
PHGDH-227ENST00000641811 CABP1Q9NZU7 370 aa24.51■■□□□ 1.51
PHGDH-227ENST00000641811 ARHGEF10O15013 1369 aa24.5■■□□□ 1.51
PHGDH-227ENST00000641811 SBNO2Q9Y2G9 1366 aa24.5■■□□□ 1.51
PHGDH-227ENST00000641811 ST20-MTHFSA0A0A6YYL1 179 aa24.49■■□□□ 1.51
PHGDH-227ENST00000641811 ZNF772Q68DY9 489 aaPredicted RBP24.48■■□□□ 1.51
PHGDH-227ENST00000641811 ALS2Q96Q42 1657 aa24.47■■□□□ 1.51
PHGDH-227ENST00000641811 HAP1P54257 671 aaPredicted RBP24.46■■□□□ 1.51
PHGDH-227ENST00000641811 TESK2Q96S53 571 aa24.44■■□□□ 1.5
PHGDH-227ENST00000641811 USP47Q96K76 1375 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms