RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 WAPLQ7Z5K2 1190 aa27.53■■■□□ 2
PHGDH-210ENST00000641115 PLEKHH1Q9ULM0 1364 aa27.53■■■□□ 2
PHGDH-210ENST00000641115 NWD1Q149M9 1564 aa27.52■■■□□ 2
PHGDH-210ENST00000641115 TULP4Q9NRJ4 1543 aa27.51■■□□□ 1.99
PHGDH-210ENST00000641115 EVC2Q86UK5 1308 aa27.5■■□□□ 1.99
PHGDH-210ENST00000641115 MINK1Q8N4C8 1332 aaPredicted RBP27.5■■□□□ 1.99
PHGDH-210ENST00000641115 KCNA6P17658 529 aa27.49■■□□□ 1.99
PHGDH-210ENST00000641115 ADGRB2O60241 1585 aa27.45■■□□□ 1.99
PHGDH-210ENST00000641115 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.45■■□□□ 1.98
PHGDH-210ENST00000641115 MYOM1P52179 1685 aa27.44■■□□□ 1.98
PHGDH-210ENST00000641115 NKTRP30414 1462 aaKnown RBP27.42■■□□□ 1.98
PHGDH-210ENST00000641115 PUS7Q96PZ0 661 aaKnown RBP27.41■■□□□ 1.98
PHGDH-210ENST00000641115 SRPK2P78362 688 aaKnown RBP27.4■■□□□ 1.98
PHGDH-210ENST00000641115 DMRT2Q9Y5R5 561 aa27.39■■□□□ 1.98
PHGDH-210ENST00000641115 STRCP1A6NGW2 1772 aa27.38■■□□□ 1.97
PHGDH-210ENST00000641115 CDK19Q9BWU1 502 aa27.37■■□□□ 1.97
PHGDH-210ENST00000641115 ATAD2Q6PL18 1390 aa27.36■■□□□ 1.97
PHGDH-210ENST00000641115 NALCNQ8IZF0 1738 aa27.36■■□□□ 1.97
PHGDH-210ENST00000641115 CABP2Q9NPB3 220 aa27.36■■□□□ 1.97
PHGDH-210ENST00000641115 WASLO00401 505 aaPredicted RBP27.35■■□□□ 1.97
PHGDH-210ENST00000641115 AEBP2Q6ZN18 517 aaPredicted RBP27.31■■□□□ 1.96
PHGDH-210ENST00000641115 NINLQ9Y2I6 1382 aa27.31■■□□□ 1.96
PHGDH-210ENST00000641115 CDC42BPGQ6DT37 1551 aa27.3■■□□□ 1.96
PHGDH-210ENST00000641115 PROSER2Q86WR7 435 aaPredicted RBP27.3■■□□□ 1.96
PHGDH-210ENST00000641115 ADGRL3Q9HAR2 1447 aa27.29■■□□□ 1.96
PHGDH-210ENST00000641115 TMC1Q8TDI8 760 aa27.29■■□□□ 1.96
PHGDH-210ENST00000641115 PANK3Q9H999 370 aa27.27■■□□□ 1.96
PHGDH-210ENST00000641115 FMN2Q9NZ56 1722 aa27.27■■□□□ 1.96
PHGDH-210ENST00000641115 C14orf37Q86TY3 774 aa27.26■■□□□ 1.95
PHGDH-210ENST00000641115 ATP7BP35670 1465 aa27.25■■□□□ 1.95
PHGDH-210ENST00000641115 ITSN1Q15811 1721 aa27.25■■□□□ 1.95
PHGDH-210ENST00000641115 RBM33Q96EV2 1170 aaKnown RBP27.25■■□□□ 1.95
PHGDH-210ENST00000641115 ZNF335Q9H4Z2 1342 aaPredicted RBP27.24■■□□□ 1.95
PHGDH-210ENST00000641115 TOPAZ1Q8N9V7 1692 aa27.24■■□□□ 1.95
PHGDH-210ENST00000641115 SLC12A5Q9H2X9 1139 aa27.23■■□□□ 1.95
PHGDH-210ENST00000641115 NCOA3Q9Y6Q9 1424 aa27.23■■□□□ 1.95
PHGDH-210ENST00000641115 NUDT16Q96DE0 195 aaKnown RBP27.23■■□□□ 1.95
PHGDH-210ENST00000641115 TMEM94Q12767 1356 aa27.22■■□□□ 1.95
PHGDH-210ENST00000641115 USP32Q8NFA0 1604 aa27.22■■□□□ 1.95
PHGDH-210ENST00000641115 ANP32CO43423 234 aa27.21■■□□□ 1.95
PHGDH-210ENST00000641115 PPIP5K1Q6PFW1 1433 aa27.2■■□□□ 1.95
PHGDH-210ENST00000641115 ANKRD36BQ8N2N9 1353 aa27.2■■□□□ 1.95
PHGDH-210ENST00000641115 ANKARQ7Z5J8 1434 aa27.2■■□□□ 1.94
PHGDH-210ENST00000641115 CCDC61Q9Y6R9 512 aa27.19■■□□□ 1.94
PHGDH-210ENST00000641115 RGPD8O14715 1765 aaPredicted RBP27.19■■□□□ 1.94
PHGDH-210ENST00000641115 XIRP1Q702N8 1843 aaKnown RBP27.19■■□□□ 1.94
PHGDH-210ENST00000641115 PRR36Q9H6K5 1346 aa27.18■■□□□ 1.94
PHGDH-210ENST00000641115 TERF2IPQ9NYB0 399 aa27.17■■□□□ 1.94
PHGDH-210ENST00000641115 CABP1Q9NZU7 370 aa27.17■■□□□ 1.94
PHGDH-210ENST00000641115 LRRC7Q96NW7 1537 aa27.16■■□□□ 1.94
PHGDH-210ENST00000641115 NUTM2FA1L443 756 aa27.16■■□□□ 1.94
PHGDH-210ENST00000641115 PER1O15534 1290 aaPredicted RBP27.16■■□□□ 1.94
PHGDH-210ENST00000641115 KNSTRNQ9Y448 316 aa27.16■■□□□ 1.94
PHGDH-210ENST00000641115 MIER1Q8N108 512 aa27.16■■□□□ 1.94
PHGDH-210ENST00000641115 C19orf44Q9H6X5 657 aa27.15■■□□□ 1.94
PHGDH-210ENST00000641115 A0A1W2PP64 1363 aa27.15■■□□□ 1.94
PHGDH-210ENST00000641115 CD163L1Q9NR16 1453 aa27.14■■□□□ 1.94
PHGDH-210ENST00000641115 DCCP43146 1447 aa27.14■■□□□ 1.94
PHGDH-210ENST00000641115 HDGFL2Q7Z4V5 671 aaPredicted RBP27.14■■□□□ 1.94
PHGDH-210ENST00000641115 AKAP12Q02952 1782 aa27.13■■□□□ 1.93
PHGDH-210ENST00000641115 NSD3Q9BZ95 1437 aa27.12■■□□□ 1.93
PHGDH-210ENST00000641115 MSH6P52701 1360 aa27.12■■□□□ 1.93
PHGDH-210ENST00000641115 CARD14Q9BXL6 1004 aa27.11■■□□□ 1.93
PHGDH-210ENST00000641115 MON2Q7Z3U7 1717 aa27.1■■□□□ 1.93
PHGDH-210ENST00000641115 KTN1Q86UP2 1357 aaKnown RBP27.09■■□□□ 1.93
PHGDH-210ENST00000641115 ATF3P18847 181 aa27.08■■□□□ 1.93
PHGDH-210ENST00000641115 CPSF1Q10570 1443 aaKnown RBP27.08■■□□□ 1.93
PHGDH-210ENST00000641115 PRKRIP1Q9H875 184 aaPredicted RBP27.08■■□□□ 1.93
PHGDH-210ENST00000641115 PLEKHG3A1L390 1219 aa27.07■■□□□ 1.92
PHGDH-210ENST00000641115 CNGB1Q14028 1251 aaPredicted RBP27.07■■□□□ 1.92
PHGDH-210ENST00000641115 NPC1L1Q9UHC9 1359 aa27.06■■□□□ 1.92
PHGDH-210ENST00000641115 AMER1Q5JTC6 1135 aaPredicted RBP27.05■■□□□ 1.92
PHGDH-210ENST00000641115 CADPS2Q86UW7 1296 aa27.05■■□□□ 1.92
PHGDH-210ENST00000641115 CC2D1BQ5T0F9 858 aaKnown RBP27.04■■□□□ 1.92
PHGDH-210ENST00000641115 ZNF692Q9BU19 519 aaPredicted RBP27.04■■□□□ 1.92
PHGDH-210ENST00000641115 CGNL1Q0VF96 1302 aa27.04■■□□□ 1.92
PHGDH-210ENST00000641115 LTBP4Q8N2S1 1624 aa27.03■■□□□ 1.92
PHGDH-210ENST00000641115 KIF20BQ96Q89 1820 aa27.03■■□□□ 1.92
PHGDH-210ENST00000641115 ACEP12821 1306 aa27.03■■□□□ 1.92
PHGDH-210ENST00000641115 EDC4Q6P2E9 1401 aaKnown RBP27.02■■□□□ 1.92
PHGDH-210ENST00000641115 PMFBP1Q8TBY8 1022 aa27.01■■□□□ 1.92
PHGDH-210ENST00000641115 POLR3AO14802 1390 aaPredicted RBP27.01■■□□□ 1.92
PHGDH-210ENST00000641115 MST1RQ04912 1400 aa27.01■■□□□ 1.92
PHGDH-210ENST00000641115 C1orf167Q5SNV9 1468 aa27.01■■□□□ 1.92
PHGDH-210ENST00000641115 KIF1AQ12756 1690 aa27.01■■□□□ 1.91
PHGDH-210ENST00000641115 NRKQ7Z2Y5 1582 aa27.01■■□□□ 1.91
PHGDH-210ENST00000641115 RALBP1Q15311 655 aa27.01■■□□□ 1.91
PHGDH-210ENST00000641115 PARD3Q8TEW0 1356 aa27■■□□□ 1.91
PHGDH-210ENST00000641115 NGDNQ8NEJ9 315 aaKnown RBP27■■□□□ 1.91
PHGDH-210ENST00000641115 NSD2O96028 1365 aa26.99■■□□□ 1.91
PHGDH-210ENST00000641115 ESCO1Q5FWF5 840 aa26.99■■□□□ 1.91
PHGDH-210ENST00000641115 PHF8Q9UPP1 1060 aa26.99■■□□□ 1.91
PHGDH-210ENST00000641115 ANKRD26Q9UPS8 1709 aa26.99■■□□□ 1.91
PHGDH-210ENST00000641115 USP6P35125 1406 aa26.98■■□□□ 1.91
PHGDH-210ENST00000641115 CCER2I3L3R5 266 aa26.94■■□□□ 1.9
PHGDH-210ENST00000641115 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.93■■□□□ 1.9
PHGDH-210ENST00000641115 ORAI2Q96SN7 254 aa26.93■■□□□ 1.9
PHGDH-210ENST00000641115 MYBBP1AQ9BQG0 1328 aaKnown RBP26.92■■□□□ 1.9
PHGDH-210ENST00000641115 FYB1O15117 783 aa26.89■■□□□ 1.9
PHGDH-210ENST00000641115 SSH2Q76I76 1423 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms