RNA–Protein interactions for RNA: ENST00000640077.1

MED17-223, Transcript of mediator complex subunit 17, human

TSL 5

Gene MED17, Length 2,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-223	ENST00000640077	PRPF38B	Q5VTL8	546 aa	Known RBP	8.01	□□□□□ -1.13
MED17-223	ENST00000640077	NISCH	Q9Y2I1	1504 aa		8	□□□□□ -1.13
MED17-223	ENST00000640077	ADH1B	P00325	375 aa		7.99	□□□□□ -1.13
MED17-223	ENST00000640077	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	7.99	□□□□□ -1.13
MED17-223	ENST00000640077	PLA2G2E	Q9NZK7	142 aa		7.99	□□□□□ -1.13
MED17-223	ENST00000640077	TMEM132A	Q24JP5	1023 aa		7.99	□□□□□ -1.13
MED17-223	ENST00000640077	RNF19B	Q6ZMZ0	732 aa		7.99	□□□□□ -1.13
MED17-223	ENST00000640077	POLR3E	Q9NVU0	708 aa		7.99	□□□□□ -1.13
MED17-223	ENST00000640077	SPSB2	Q99619	263 aa		7.98	□□□□□ -1.13
MED17-223	ENST00000640077	PCDHB15	Q9Y5E8	787 aa		7.98	□□□□□ -1.13
MED17-223	ENST00000640077	SPDYE5	A6NIY4	337 aa		7.98	□□□□□ -1.13
MED17-223	ENST00000640077	TLL1	O43897	1013 aa		7.98	□□□□□ -1.13
MED17-223	ENST00000640077	MSS51	Q4VC12	460 aa		7.98	□□□□□ -1.13
MED17-223	ENST00000640077	LILRB3	O75022	631 aa		7.97	□□□□□ -1.13
MED17-223	ENST00000640077	MTMR2	Q13614	643 aa		7.97	□□□□□ -1.13
MED17-223	ENST00000640077	RETREG3	Q86VR2	466 aa		7.97	□□□□□ -1.13
MED17-223	ENST00000640077	PCMTD1	Q96MG8	357 aa	Predicted RBP	7.97	□□□□□ -1.13
MED17-223	ENST00000640077	ZBTB3	Q9H5J0	574 aa		7.97	□□□□□ -1.13
MED17-223	ENST00000640077	USB1	Q9BQ65	265 aa	Known RBP	7.97	□□□□□ -1.13
MED17-223	ENST00000640077	NKX2-3	Q8TAU0	364 aa		7.96	□□□□□ -1.14
MED17-223	ENST00000640077	C6orf229	H3BNL8	230 aa		7.95	□□□□□ -1.14
MED17-223	ENST00000640077	HRC	P23327	699 aa		7.95	□□□□□ -1.14
MED17-223	ENST00000640077	PPP2R2D	Q66LE6	453 aa		7.95	□□□□□ -1.14
MED17-223	ENST00000640077	PROCA1	Q8NCQ7	364 aa	Predicted RBP	7.95	□□□□□ -1.14
MED17-223	ENST00000640077	FAM160A2	Q8N612	972 aa	Predicted RBP	7.95	□□□□□ -1.14
MED17-223	ENST00000640077	SYMPK	Q92797	1274 aa	Known RBP	7.94	□□□□□ -1.14
MED17-223	ENST00000640077	QPCT	Q16769	361 aa		7.94	□□□□□ -1.14
MED17-223	ENST00000640077	SLC6A16	Q9GZN6	736 aa		7.94	□□□□□ -1.14
MED17-223	ENST00000640077	CSPP1	Q1MSJ5	1256 aa		7.93	□□□□□ -1.14
MED17-223	ENST00000640077	CABLES1	Q8TDN4	633 aa		7.93	□□□□□ -1.14
MED17-223	ENST00000640077	MMP16	P51512	607 aa		7.93	□□□□□ -1.14
MED17-223	ENST00000640077	DESI1	Q6ICB0	168 aa		7.93	□□□□□ -1.14
MED17-223	ENST00000640077		A0A0G2JS52	829 aa		7.91	□□□□□ -1.14
MED17-223	ENST00000640077	PRR7	Q8TB68	274 aa		7.91	□□□□□ -1.14
MED17-223	ENST00000640077	NUTM2B	A6NNL0	878 aa	Predicted RBP	7.91	□□□□□ -1.14
MED17-223	ENST00000640077	NUTM2E	B1AL46	878 aa	Predicted RBP	7.91	□□□□□ -1.14
MED17-223	ENST00000640077	DXO	O77932	396 aa	Known RBP	7.91	□□□□□ -1.14
MED17-223	ENST00000640077	GGCX	P38435	758 aa		7.91	□□□□□ -1.14
MED17-223	ENST00000640077	RTL5	Q5HYW3	569 aa	Predicted RBP	7.91	□□□□□ -1.14
MED17-223	ENST00000640077	NUTM2D	Q5VT03	806 aa	Predicted RBP	7.91	□□□□□ -1.14
MED17-223	ENST00000640077	NUTM2A	Q8IVF1	878 aa	Predicted RBP	7.91	□□□□□ -1.14
MED17-223	ENST00000640077	CFAP99	D6REC4	459 aa		7.9	□□□□□ -1.14
MED17-223	ENST00000640077	S1PR4	O95977	384 aa		7.9	□□□□□ -1.14
MED17-223	ENST00000640077	JUND	P17535	347 aa		7.9	□□□□□ -1.14
MED17-223	ENST00000640077	FBXO31	Q5XUX0	539 aa	Predicted RBP	7.9	□□□□□ -1.14
MED17-223	ENST00000640077	PPP1R18	Q6NYC8	613 aa		7.9	□□□□□ -1.15
MED17-223	ENST00000640077	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	7.9	□□□□□ -1.15
MED17-223	ENST00000640077	PRDM9	Q9NQV7	894 aa		7.89	□□□□□ -1.15
MED17-223	ENST00000640077	RFC5	P40937	340 aa		7.88	□□□□□ -1.15
MED17-223	ENST00000640077	ATP1B4	Q9UN42	357 aa	Predicted RBP	7.88	□□□□□ -1.15
MED17-223	ENST00000640077	RNF223	E7ERA6	249 aa		7.87	□□□□□ -1.15
MED17-223	ENST00000640077	ANKLE1	Q8NAG6	615 aa		7.87	□□□□□ -1.15
MED17-223	ENST00000640077	PTPRN	Q16849	979 aa		7.86	□□□□□ -1.15
MED17-223	ENST00000640077	TMEM259	Q4ZIN3	620 aa		7.86	□□□□□ -1.15
MED17-223	ENST00000640077	HELB	Q8NG08	1087 aa	Predicted RBP	7.86	□□□□□ -1.15
MED17-223	ENST00000640077	LYPD8	Q6UX82	237 aa		7.86	□□□□□ -1.15
MED17-223	ENST00000640077	BANK1	Q8NDB2	785 aa		7.83	□□□□□ -1.16
MED17-223	ENST00000640077	FCF1	Q9Y324	198 aa	Known RBP	7.83	□□□□□ -1.16
MED17-223	ENST00000640077	PPEF1	O14829	653 aa	Predicted RBP	7.83	□□□□□ -1.16
MED17-223	ENST00000640077	NUDT12	Q9BQG2	462 aa		7.83	□□□□□ -1.16
MED17-223	ENST00000640077	RGS20	O76081	388 aa		7.82	□□□□□ -1.16
MED17-223	ENST00000640077	CCNYL3	P0C7X3	344 aa		7.82	□□□□□ -1.16
MED17-223	ENST00000640077	CTDSPL2	Q05D32	466 aa		7.82	□□□□□ -1.16
MED17-223	ENST00000640077	TSC1	Q92574	1164 aa		7.82	□□□□□ -1.16
MED17-223	ENST00000640077	EVA1B	Q9NVM1	165 aa		7.82	□□□□□ -1.16
MED17-223	ENST00000640077	SOCS7	O14512	581 aa		7.81	□□□□□ -1.16
MED17-223	ENST00000640077	PER1	O15534	1290 aa	Predicted RBP	7.81	□□□□□ -1.16
MED17-223	ENST00000640077	AP1G2	O75843	785 aa		7.81	□□□□□ -1.16
MED17-223	ENST00000640077	F12	P00748	615 aa	Predicted RBP	7.81	□□□□□ -1.16
MED17-223	ENST00000640077	USP17L8	P0C7I0	530 aa		7.8	□□□□□ -1.16
MED17-223	ENST00000640077	KCNH2	Q12809	1159 aa		7.79	□□□□□ -1.16
MED17-223	ENST00000640077	PLA2G2C	Q5R387	149 aa		7.79	□□□□□ -1.16
MED17-223	ENST00000640077	RPIA	P49247	311 aa		7.79	□□□□□ -1.16
MED17-223	ENST00000640077	EMID1	Q96A84	441 aa	Predicted RBP	7.78	□□□□□ -1.16
MED17-223	ENST00000640077	CCDC24	Q8N4L8	307 aa		7.78	□□□□□ -1.16
MED17-223	ENST00000640077		V9GY48	417 aa	Predicted RBP	7.78	□□□□□ -1.16
MED17-223	ENST00000640077	LRRN4	Q8WUT4	740 aa		7.77	□□□□□ -1.17
MED17-223	ENST00000640077	PTCRA	Q6ISU1	281 aa	Predicted RBP	7.76	□□□□□ -1.17
MED17-223	ENST00000640077	LIAT1	Q6ZQX7	453 aa		7.76	□□□□□ -1.17
MED17-223	ENST00000640077	ZBTB24	O43167	697 aa	Predicted RBP	7.75	□□□□□ -1.17
MED17-223	ENST00000640077	SLC19A1	P41440	591 aa		7.75	□□□□□ -1.17
MED17-223	ENST00000640077	UNC93B1	Q9H1C4	597 aa		7.75	□□□□□ -1.17
MED17-223	ENST00000640077	MAP10	Q9P2G4	905 aa		7.75	□□□□□ -1.17
MED17-223	ENST00000640077	CTH	P32929	405 aa		7.75	□□□□□ -1.17
MED17-223	ENST00000640077	HMX1	Q9NP08	348 aa	Predicted RBP	7.75	□□□□□ -1.17
MED17-223	ENST00000640077	PRKD2	Q9BZL6	878 aa		7.74	□□□□□ -1.17
MED17-223	ENST00000640077	MTMR14	Q8NCE2	650 aa		7.74	□□□□□ -1.17
MED17-223	ENST00000640077	ARMC2	Q8NEN0	867 aa		7.74	□□□□□ -1.17
MED17-223	ENST00000640077	APBB1	O00213	710 aa		7.73	□□□□□ -1.17
MED17-223	ENST00000640077	TRIM32	Q13049	653 aa		7.73	□□□□□ -1.17
MED17-223	ENST00000640077	SPRYD7	Q5W111	196 aa		7.73	□□□□□ -1.17
MED17-223	ENST00000640077	GJD4	Q96KN9	370 aa	Predicted RBP	7.73	□□□□□ -1.17
MED17-223	ENST00000640077	SNRK	Q9NRH2	765 aa		7.73	□□□□□ -1.17
MED17-223	ENST00000640077	CD2BP2	O95400	341 aa	Known RBP	7.72	□□□□□ -1.17
MED17-223	ENST00000640077	FLII	Q13045	1269 aa		7.72	□□□□□ -1.17
MED17-223	ENST00000640077	TRIM34	Q9BYJ4	488 aa		7.72	□□□□□ -1.17
MED17-223	ENST00000640077	ZC3H4	Q9UPT8	1303 aa	Known RBP	7.72	□□□□□ -1.17
MED17-223	ENST00000640077	MCM6	Q14566	821 aa		7.72	□□□□□ -1.17
MED17-223	ENST00000640077	NR6A1	Q15406	480 aa		7.72	□□□□□ -1.17
MED17-223	ENST00000640077	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	7.72	□□□□□ -1.17	5e-7	■■■□□ 16.1

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