RNA–Protein interactions for RNA: ENST00000638463.1

EGFR-211, Transcript of epidermal growth factor receptor, humanhuman

TSL 5 BASIC

Gene EGFR, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-211ENST00000638463 LETM1O95202 739 aaPredicted RBP13.39□□□□□ -0.27
EGFR-211ENST00000638463 ERCC4Q92889 916 aaPredicted RBP13.39□□□□□ -0.27
EGFR-211ENST00000638463 TRERF1Q96PN7 1200 aa13.38□□□□□ -0.27
EGFR-211ENST00000638463 XPCQ01831 940 aaPredicted RBP13.38□□□□□ -0.27
EGFR-211ENST00000638463 AAMPQ13685 434 aa13.38□□□□□ -0.27
EGFR-211ENST00000638463 PDZRN3Q9UPQ7 1066 aa13.38□□□□□ -0.27
EGFR-211ENST00000638463 HDAC5Q9UQL6 1122 aa13.38□□□□□ -0.27
EGFR-211ENST00000638463 EIF3AQ14152 1382 aaKnown RBP13.38□□□□□ -0.27
EGFR-211ENST00000638463 CDR1P51861 262 aa13.38□□□□□ -0.27
EGFR-211ENST00000638463 CDC45O75419 566 aa13.37□□□□□ -0.27
EGFR-211ENST00000638463 NESP48681 1621 aa13.37□□□□□ -0.27
EGFR-211ENST00000638463 SPAG9O60271 1321 aaKnown RBP13.37□□□□□ -0.27
EGFR-211ENST00000638463 STK26Q9P289 416 aa13.37□□□□□ -0.27
EGFR-211ENST00000638463 AXDND1Q5T1B0 1012 aaPredicted RBP13.37□□□□□ -0.27
EGFR-211ENST00000638463 HMGXB3Q12766 1538 aa13.36□□□□□ -0.27
EGFR-211ENST00000638463 NGEFQ8N5V2 710 aa13.36□□□□□ -0.27
EGFR-211ENST00000638463 CHMP4CQ96CF2 233 aa13.36□□□□□ -0.27
EGFR-211ENST00000638463 LMOD3Q0VAK6 560 aa13.36□□□□□ -0.27
EGFR-211ENST00000638463 AQRO60306 1485 aaKnown RBP eCLIP13.36□□□□□ -0.276e-7■■■□□ 15.2
EGFR-211ENST00000638463 USP8P40818 1118 aa13.35□□□□□ -0.27
EGFR-211ENST00000638463 ANKRD20A12PQ8NF67 263 aa13.35□□□□□ -0.27
EGFR-211ENST00000638463 RUFY2Q8WXA3 655 aa13.35□□□□□ -0.27
EGFR-211ENST00000638463 PLCD4Q9BRC7 762 aa13.35□□□□□ -0.27
EGFR-211ENST00000638463 SDF4Q9BRK5 362 aa13.35□□□□□ -0.27
EGFR-211ENST00000638463 CALCOCO1Q9P1Z2 691 aa13.35□□□□□ -0.27
EGFR-211ENST00000638463 NAIPQ13075 1403 aa13.35□□□□□ -0.27
EGFR-211ENST00000638463 CCDC27Q2M243 656 aa13.35□□□□□ -0.27
EGFR-211ENST00000638463 NAT10Q9H0A0 1025 aaKnown RBP13.35□□□□□ -0.27
EGFR-211ENST00000638463 PDILTQ8N807 584 aa13.35□□□□□ -0.27
EGFR-211ENST00000638463 FIBPO43427 364 aa13.34□□□□□ -0.27
EGFR-211ENST00000638463 NEK4P51957 841 aa13.34□□□□□ -0.27
EGFR-211ENST00000638463 PCMTD1Q96MG8 357 aaPredicted RBP13.34□□□□□ -0.27
EGFR-211ENST00000638463 POLA1P09884 1462 aaPredicted RBP13.34□□□□□ -0.27
EGFR-211ENST00000638463 CLCN1P35523 988 aa13.34□□□□□ -0.27
EGFR-211ENST00000638463 PCF11O94913 1555 aaKnown RBP13.34□□□□□ -0.27
EGFR-211ENST00000638463 DCTN1Q14203 1278 aa13.34□□□□□ -0.27
EGFR-211ENST00000638463 RABEP1Q15276 862 aa13.34□□□□□ -0.27
EGFR-211ENST00000638463 CHMP4AQ9BY43 222 aa13.34□□□□□ -0.27
EGFR-211ENST00000638463 TOMM22Q9NS69 142 aa13.34□□□□□ -0.27
EGFR-211ENST00000638463 CIZ1Q9ULV3 898 aaPredicted RBP13.34□□□□□ -0.27
EGFR-211ENST00000638463 CCDC144AA2RUR9 1427 aa13.33□□□□□ -0.27
EGFR-211ENST00000638463 PEG3Q9GZU2 1588 aa13.33□□□□□ -0.27
EGFR-211ENST00000638463 EFCAB5A4FU69 1503 aa13.33□□□□□ -0.28
EGFR-211ENST00000638463 C11orf95C9JLR9 678 aaPredicted RBP13.32□□□□□ -0.28
EGFR-211ENST00000638463 KIAA0754O94854 1291 aa13.32□□□□□ -0.28
EGFR-211ENST00000638463 TTLL5Q6EMB2 1281 aa13.32□□□□□ -0.28
EGFR-211ENST00000638463 FMNL2Q96PY5 1086 aa13.32□□□□□ -0.28
EGFR-211ENST00000638463 SMC2O95347 1197 aa13.32□□□□□ -0.28
EGFR-211ENST00000638463 K7ELQ4 463 aaPredicted RBP13.32□□□□□ -0.28
EGFR-211ENST00000638463 CT47B1P0C2W7 299 aaPredicted RBP13.31□□□□□ -0.28
EGFR-211ENST00000638463 TOPBP1Q92547 1522 aa13.31□□□□□ -0.28
EGFR-211ENST00000638463 CCDC192P0DO97 292 aa13.31□□□□□ -0.28
EGFR-211ENST00000638463 CCP110O43303 1012 aa13.31□□□□□ -0.28
EGFR-211ENST00000638463 PPP4R3BQ5MIZ7 849 aa13.31□□□□□ -0.28
EGFR-211ENST00000638463 EFCAB2Q5VUJ9 269 aa13.31□□□□□ -0.28
EGFR-211ENST00000638463 CPLX2Q6PUV4 134 aaKnown RBP13.31□□□□□ -0.28
EGFR-211ENST00000638463 HOOK1Q9UJC3 728 aaKnown RBP13.31□□□□□ -0.28
EGFR-211ENST00000638463 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.31□□□□□ -0.28
EGFR-211ENST00000638463 API5Q9BZZ5 524 aaKnown RBP13.3□□□□□ -0.28
EGFR-211ENST00000638463 CWC22Q9HCG8 908 aaKnown RBP13.3□□□□□ -0.28
EGFR-211ENST00000638463 UNC13AQ9UPW8 1703 aa13.3□□□□□ -0.28
EGFR-211ENST00000638463 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.3□□□□□ -0.28
EGFR-211ENST00000638463 CAGE1Q8TC20 777 aa13.3□□□□□ -0.28
EGFR-211ENST00000638463 KANK1Q14678 1352 aa13.3□□□□□ -0.28
EGFR-211ENST00000638463 MAPKBP1O60336 1514 aa13.3□□□□□ -0.28
EGFR-211ENST00000638463 FOSBP53539 338 aa13.3□□□□□ -0.28
EGFR-211ENST00000638463 ADAMTS8Q9UP79 889 aa13.3□□□□□ -0.28
EGFR-211ENST00000638463 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
EGFR-211ENST00000638463 DYNC1I1O14576 645 aa13.29□□□□□ -0.28
EGFR-211ENST00000638463 CPLX1O14810 134 aa13.29□□□□□ -0.28
EGFR-211ENST00000638463 RNF20Q5VTR2 975 aa13.29□□□□□ -0.28
EGFR-211ENST00000638463 BRD4O60885 1362 aaPredicted RBP13.29□□□□□ -0.28
EGFR-211ENST00000638463 SYCE3A1L190 88 aa13.29□□□□□ -0.28
EGFR-211ENST00000638463 EIF3JO75822 258 aaKnown RBP13.29□□□□□ -0.28
EGFR-211ENST00000638463 GPATCH11Q8N954 259 aa13.29□□□□□ -0.28
EGFR-211ENST00000638463 TERF2IPQ9NYB0 399 aa13.29□□□□□ -0.28
EGFR-211ENST00000638463 MCM2P49736 904 aa13.28□□□□□ -0.28
EGFR-211ENST00000638463 GGT6Q6P531 493 aa13.28□□□□□ -0.28
EGFR-211ENST00000638463 SMG6Q86US8 1419 aaKnown RBP13.28□□□□□ -0.28
EGFR-211ENST00000638463 ANKRD50Q9ULJ7 1429 aa13.28□□□□□ -0.28
EGFR-211ENST00000638463 UBXN4Q92575 508 aa13.28□□□□□ -0.28
EGFR-211ENST00000638463 KINO60870 393 aaKnown RBP13.28□□□□□ -0.28
EGFR-211ENST00000638463 NAP1L1P55209 391 aaKnown RBP13.28□□□□□ -0.28
EGFR-211ENST00000638463 PDE3AQ14432 1141 aa13.28□□□□□ -0.28
EGFR-211ENST00000638463 RSPH4AQ5TD94 716 aa13.28□□□□□ -0.28
EGFR-211ENST00000638463 KIF3BO15066 747 aa13.27□□□□□ -0.28
EGFR-211ENST00000638463 SKAP1Q86WV1 359 aa13.27□□□□□ -0.28
EGFR-211ENST00000638463 GIMAP7Q8NHV1 300 aa13.27□□□□□ -0.29
EGFR-211ENST00000638463 ERLIN1O75477 346 aa13.27□□□□□ -0.29
EGFR-211ENST00000638463 TRIM29Q14134 588 aa13.27□□□□□ -0.29
EGFR-211ENST00000638463 CCDC9Q9Y3X0 531 aaKnown RBP13.27□□□□□ -0.29
EGFR-211ENST00000638463 EHBP1L1Q8N3D4 1523 aa13.27□□□□□ -0.29
EGFR-211ENST00000638463 BIVM-ERCC5R4GMW8 1640 aa13.27□□□□□ -0.29
EGFR-211ENST00000638463 TMCO3Q6UWJ1 677 aa13.27□□□□□ -0.29
EGFR-211ENST00000638463 OLFM4Q6UX06 510 aa13.27□□□□□ -0.29
EGFR-211ENST00000638463 SYNE3Q6ZMZ3 975 aa13.27□□□□□ -0.29
EGFR-211ENST00000638463 FAM177A1Q8N128 213 aaPredicted RBP13.27□□□□□ -0.29
EGFR-211ENST00000638463 IPO4Q8TEX9 1081 aaKnown RBP13.27□□□□□ -0.29
EGFR-211ENST00000638463 MAP3K1Q13233 1512 aa13.26□□□□□ -0.29
EGFR-211ENST00000638463 PRDM2Q13029 1718 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms