RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 ERC2O15083 957 aa18.02■□□□□ 0.48
UBE3A-227ENST00000638011 CFAP57Q96MR6 1250 aa18.02■□□□□ 0.48
UBE3A-227ENST00000638011 LMOD2Q6P5Q4 547 aa18.02■□□□□ 0.48
UBE3A-227ENST00000638011 SIN3AQ96ST3 1273 aa18.02■□□□□ 0.48
UBE3A-227ENST00000638011 NOL10Q9BSC4 688 aaKnown RBP18.02■□□□□ 0.48
UBE3A-227ENST00000638011 MAGEC2Q9UBF1 373 aaPredicted RBP18.02■□□□□ 0.47
UBE3A-227ENST00000638011 BAZ1BQ9UIG0 1483 aaKnown RBP18.02■□□□□ 0.47
UBE3A-227ENST00000638011 DNAJC2Q99543 621 aaKnown RBP18.02■□□□□ 0.47
UBE3A-227ENST00000638011 HSP90AB4PQ58FF6 505 aa18.01■□□□□ 0.47
UBE3A-227ENST00000638011 RBM33Q96EV2 1170 aaKnown RBP18.01■□□□□ 0.47
UBE3A-227ENST00000638011 STIM1Q13586 685 aa18■□□□□ 0.47
UBE3A-227ENST00000638011 PDILTQ8N807 584 aa18■□□□□ 0.47
UBE3A-227ENST00000638011 SYCP1Q15431 976 aa17.99■□□□□ 0.47
UBE3A-227ENST00000638011 SSR1P43307 286 aaKnown RBP17.99■□□□□ 0.47
UBE3A-227ENST00000638011 CCDC181Q5TID7 509 aa17.99■□□□□ 0.47
UBE3A-227ENST00000638011 CRACR2AQ9BSW2 395 aa17.99■□□□□ 0.47
UBE3A-227ENST00000638011 ZNF396Q96N95 335 aaPredicted RBP17.99■□□□□ 0.47
UBE3A-227ENST00000638011 UBE2Q2Q8WVN8 375 aa17.99■□□□□ 0.47
UBE3A-227ENST00000638011 ESPNB1AK53 854 aa17.98■□□□□ 0.47
UBE3A-227ENST00000638011 ANO2Q9NQ90 1003 aa17.98■□□□□ 0.47
UBE3A-227ENST00000638011 VPS37CA5D8V6 355 aaPredicted RBP17.98■□□□□ 0.47
UBE3A-227ENST00000638011 STAMBPO95630 424 aa17.98■□□□□ 0.47
UBE3A-227ENST00000638011 KRI1Q8N9T8 703 aaKnown RBP17.98■□□□□ 0.47
UBE3A-227ENST00000638011 HMGB1P09429 215 aaKnown RBP17.98■□□□□ 0.47
UBE3A-227ENST00000638011 SLC4A10Q6U841 1118 aa17.97■□□□□ 0.47
UBE3A-227ENST00000638011 CGNQ9P2M7 1197 aaKnown RBP17.97■□□□□ 0.47
UBE3A-227ENST00000638011 SMC2O95347 1197 aa17.97■□□□□ 0.47
UBE3A-227ENST00000638011 HIP1O00291 1037 aa17.96■□□□□ 0.47
UBE3A-227ENST00000638011 FRAT2O75474 233 aaPredicted RBP17.96■□□□□ 0.47
UBE3A-227ENST00000638011 TMCO3Q6UWJ1 677 aa17.96■□□□□ 0.47
UBE3A-227ENST00000638011 PPFIBP1Q86W92 1011 aa17.96■□□□□ 0.47
UBE3A-227ENST00000638011 KIAA1328Q86T90 577 aa17.96■□□□□ 0.46
UBE3A-227ENST00000638011 G3V3G9 751 aa17.95■□□□□ 0.46
UBE3A-227ENST00000638011 DCAF8Q5TAQ9 597 aa17.95■□□□□ 0.46
UBE3A-227ENST00000638011 ZSCAN30Q86W11 494 aa17.95■□□□□ 0.46
UBE3A-227ENST00000638011 POTEB2H3BUK9 544 aa17.95■□□□□ 0.46
UBE3A-227ENST00000638011 CIZ1Q9ULV3 898 aaPredicted RBP17.95■□□□□ 0.46
UBE3A-227ENST00000638011 SETSIPP0DME0 302 aa17.94■□□□□ 0.46
UBE3A-227ENST00000638011 MCM5P33992 734 aa17.94■□□□□ 0.46
UBE3A-227ENST00000638011 RSPH4AQ5TD94 716 aa17.94■□□□□ 0.46
UBE3A-227ENST00000638011 UBXN4Q92575 508 aa17.94■□□□□ 0.46
UBE3A-227ENST00000638011 ZFYVE27Q5T4F4 411 aa17.94■□□□□ 0.46
UBE3A-227ENST00000638011 RALYLQ86SE5 291 aaKnown RBP17.94■□□□□ 0.46
UBE3A-227ENST00000638011 TIGD1Q96MW7 591 aa17.93■□□□□ 0.46
UBE3A-227ENST00000638011 FOXD4L6Q3SYB3 417 aaPredicted RBP17.93■□□□□ 0.46
UBE3A-227ENST00000638011 FOXD4L3Q6VB84 417 aaPredicted RBP17.93■□□□□ 0.46
UBE3A-227ENST00000638011 DESP17661 470 aa17.93■□□□□ 0.46
UBE3A-227ENST00000638011 CENPHQ9H3R5 247 aa17.93■□□□□ 0.46
UBE3A-227ENST00000638011 RAB3GAP2Q9H2M9 1393 aa17.93■□□□□ 0.46
UBE3A-227ENST00000638011 PLEKHG5O94827 1062 aa17.93■□□□□ 0.46
UBE3A-227ENST00000638011 ANKRD1Q15327 319 aa17.93■□□□□ 0.46
UBE3A-227ENST00000638011 IMMTQ16891 758 aaKnown RBP17.92■□□□□ 0.46
UBE3A-227ENST00000638011 GRPEL1Q9HAV7 217 aa17.92■□□□□ 0.46
UBE3A-227ENST00000638011 IVLP07476 585 aa17.92■□□□□ 0.46
UBE3A-227ENST00000638011 AEBP1Q8IUX7 1158 aa17.91■□□□□ 0.46
UBE3A-227ENST00000638011 KIF18AQ8NI77 898 aa17.91■□□□□ 0.46
UBE3A-227ENST00000638011 TRIM34Q9BYJ4 488 aa17.91■□□□□ 0.46
UBE3A-227ENST00000638011 API5Q9BZZ5 524 aaKnown RBP17.91■□□□□ 0.46
UBE3A-227ENST00000638011 SART3Q15020 963 aaKnown RBP17.91■□□□□ 0.46
UBE3A-227ENST00000638011 CCDC148Q8NFR7 591 aa17.91■□□□□ 0.46
UBE3A-227ENST00000638011 CLUAP1Q96AJ1 413 aa17.91■□□□□ 0.46
UBE3A-227ENST00000638011 IFIT2P09913 472 aaKnown RBP17.9■□□□□ 0.46
UBE3A-227ENST00000638011 MAP2K1Q02750 393 aaPredicted RBP17.9■□□□□ 0.46
UBE3A-227ENST00000638011 DYNC1I1O14576 645 aa17.9■□□□□ 0.46
UBE3A-227ENST00000638011 CDC45O75419 566 aa17.9■□□□□ 0.46
UBE3A-227ENST00000638011 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.9■□□□□ 0.46
UBE3A-227ENST00000638011 V9GYY5 206 aaPredicted RBP17.9■□□□□ 0.46
UBE3A-227ENST00000638011 CCDC102AQ96A19 550 aa17.9■□□□□ 0.46
UBE3A-227ENST00000638011 CEP63Q96MT8 703 aa17.89■□□□□ 0.46
UBE3A-227ENST00000638011 GIGYF2Q6Y7W6 1299 aaKnown RBP17.89■□□□□ 0.45
UBE3A-227ENST00000638011 NFXL1Q6ZNB6 911 aa17.89■□□□□ 0.45
UBE3A-227ENST00000638011 CNKSR2Q8WXI2 1034 aa17.89■□□□□ 0.45
UBE3A-227ENST00000638011 FILIP1Q7Z7B0 1213 aa17.89■□□□□ 0.45
UBE3A-227ENST00000638011 WDR33Q9C0J8 1336 aaKnown RBP17.89■□□□□ 0.45
UBE3A-227ENST00000638011 ZSCAN12O43309 604 aa17.89■□□□□ 0.45
UBE3A-227ENST00000638011 CCAR1Q8IX12 1150 aaKnown RBP17.88■□□□□ 0.45
UBE3A-227ENST00000638011 CCDC18Q5T9S5 1454 aa17.88■□□□□ 0.45
UBE3A-227ENST00000638011 SEPT6Q14141 434 aa17.88■□□□□ 0.45
UBE3A-227ENST00000638011 SPECC1LQ69YQ0 1117 aa17.88■□□□□ 0.45
UBE3A-227ENST00000638011 TUBB4BP68371 445 aa17.87■□□□□ 0.45
UBE3A-227ENST00000638011 IRX3P78415 501 aaPredicted RBP17.87■□□□□ 0.45
UBE3A-227ENST00000638011 ANKRD18BA2A2Z9 1011 aa17.87■□□□□ 0.45
UBE3A-227ENST00000638011 GCOM1H8Y6P7 765 aaPredicted RBP17.87■□□□□ 0.45
UBE3A-227ENST00000638011 MYZAPP0CAP1 466 aa17.87■□□□□ 0.45
UBE3A-227ENST00000638011 FAM114A1Q8IWE2 563 aa17.87■□□□□ 0.45
UBE3A-227ENST00000638011 C9orf78Q9NZ63 289 aaPredicted RBP17.87■□□□□ 0.45
UBE3A-227ENST00000638011 CFAP45Q9UL16 551 aa17.87■□□□□ 0.45
UBE3A-227ENST00000638011 DZIP1LQ8IYY4 767 aaKnown RBP17.87■□□□□ 0.45
UBE3A-227ENST00000638011 JAKMIP3Q5VZ66 844 aa17.87■□□□□ 0.45
UBE3A-227ENST00000638011 HMGB1P1B2RPK0 211 aaPredicted RBP17.86■□□□□ 0.45
UBE3A-227ENST00000638011 FYB1O15117 783 aa17.86■□□□□ 0.45
UBE3A-227ENST00000638011 NEMFO60524 1076 aa17.86■□□□□ 0.45
UBE3A-227ENST00000638011 SERPINC1P01008 464 aa17.86■□□□□ 0.45
UBE3A-227ENST00000638011 SMC1AQ14683 1233 aaKnown RBP17.86■□□□□ 0.45
UBE3A-227ENST00000638011 SEPT11Q9NVA2 429 aaKnown RBP17.86■□□□□ 0.45
UBE3A-227ENST00000638011 ERICH4A6NGS2 130 aa17.86■□□□□ 0.45
UBE3A-227ENST00000638011 RBM10P98175 930 aaKnown RBP17.86■□□□□ 0.45
UBE3A-227ENST00000638011 SWAP70Q9UH65 585 aa17.86■□□□□ 0.45
UBE3A-227ENST00000638011 CCDC83Q8IWF9 413 aa17.85■□□□□ 0.45
UBE3A-227ENST00000638011 FBXO3Q9UK99 471 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms