RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 C8orf34Q49A92 452 aa10.02□□□□□ -0.81
CDKL5-211ENST00000637881 SLC4A1APQ9BWU0 796 aaKnown RBP10.02□□□□□ -0.81
CDKL5-211ENST00000637881 PLXNC1O60486 1568 aa10.01□□□□□ -0.81
CDKL5-211ENST00000637881 HSPA5P11021 654 aaKnown RBP10.01□□□□□ -0.81
CDKL5-211ENST00000637881 ZSCAN20P17040 1043 aaPredicted RBP10.01□□□□□ -0.81
CDKL5-211ENST00000637881 CENPQQ7L2Z9 268 aaPredicted RBP10.01□□□□□ -0.81
CDKL5-211ENST00000637881 PANK2Q9BZ23 570 aa10.01□□□□□ -0.81
CDKL5-211ENST00000637881 KDM2BQ8NHM5 1336 aa10.01□□□□□ -0.81
CDKL5-211ENST00000637881 ERBINQ96RT1 1412 aa10.01□□□□□ -0.81
CDKL5-211ENST00000637881 CEBPAP49715 358 aaPredicted RBP10.01□□□□□ -0.81
CDKL5-211ENST00000637881 EIF4G2P78344 907 aaKnown RBP eCLIP10.01□□□□□ -0.81
CDKL5-211ENST00000637881 SLC20A2Q08357 652 aa10.01□□□□□ -0.81
CDKL5-211ENST00000637881 ZSCAN30Q86W11 494 aa10.01□□□□□ -0.81
CDKL5-211ENST00000637881 KANK1Q14678 1352 aa10□□□□□ -0.81
CDKL5-211ENST00000637881 CCDC173Q0VFZ6 552 aa10□□□□□ -0.81
CDKL5-211ENST00000637881 HS1BP3Q53T59 392 aa10□□□□□ -0.81
CDKL5-211ENST00000637881 ANTXR1Q9H6X2 564 aa10□□□□□ -0.81
CDKL5-211ENST00000637881 LRPPRCP42704 1394 aaKnown RBP10□□□□□ -0.81
CDKL5-211ENST00000637881 MPHOSPH9Q99550 1183 aa9.99□□□□□ -0.81
CDKL5-211ENST00000637881 RCAN3Q9UKA8 241 aa9.99□□□□□ -0.81
CDKL5-211ENST00000637881 INSRP06213 1382 aa9.99□□□□□ -0.81
CDKL5-211ENST00000637881 SIGLEC1Q9BZZ2 1709 aa9.99□□□□□ -0.81
CDKL5-211ENST00000637881 PTMSP20962 102 aa9.98□□□□□ -0.81
CDKL5-211ENST00000637881 PKD2Q13563 968 aa9.98□□□□□ -0.81
CDKL5-211ENST00000637881 PPP1R9BQ96SB3 815 aa9.98□□□□□ -0.81
CDKL5-211ENST00000637881 ROCK2O75116 1388 aaKnown RBP9.98□□□□□ -0.81
CDKL5-211ENST00000637881 CSPP1Q1MSJ5 1256 aa9.98□□□□□ -0.81
CDKL5-211ENST00000637881 ZMYM3Q14202 1370 aa9.97□□□□□ -0.81
CDKL5-211ENST00000637881 DDX11L8A8MPP1 907 aa9.97□□□□□ -0.81
CDKL5-211ENST00000637881 MCM4P33991 863 aa9.97□□□□□ -0.81
CDKL5-211ENST00000637881 FBXO31Q5XUX0 539 aaPredicted RBP9.97□□□□□ -0.81
CDKL5-211ENST00000637881 ZFP91Q96JP5 570 aaPredicted RBP9.97□□□□□ -0.81
CDKL5-211ENST00000637881 ZNF830Q96NB3 372 aaPredicted RBP9.97□□□□□ -0.81
CDKL5-211ENST00000637881 FAM13BQ9NYF5 915 aa9.97□□□□□ -0.81
CDKL5-211ENST00000637881 BCCIPQ9P287 314 aaKnown RBP eCLIP9.96□□□□□ -0.81
CDKL5-211ENST00000637881 GCC2Q8IWJ2 1684 aa9.96□□□□□ -0.82
CDKL5-211ENST00000637881 ZNF500O60304 480 aaPredicted RBP9.96□□□□□ -0.82
CDKL5-211ENST00000637881 CDK11BP21127 795 aaKnown RBP9.96□□□□□ -0.82
CDKL5-211ENST00000637881 AGLP35573 1532 aa9.95□□□□□ -0.82
CDKL5-211ENST00000637881 MSNP26038 577 aaKnown RBP9.95□□□□□ -0.82
CDKL5-211ENST00000637881 UQCRHLA0A096LP55 91 aa9.94□□□□□ -0.82
CDKL5-211ENST00000637881 UQCRHP07919 91 aa9.94□□□□□ -0.82
CDKL5-211ENST00000637881 NLRP1Q9C000 1473 aa9.94□□□□□ -0.82
CDKL5-211ENST00000637881 SPATA31D1Q6ZQQ2 1576 aa9.94□□□□□ -0.82
CDKL5-211ENST00000637881 REREQ9P2R6 1566 aa9.94□□□□□ -0.82
CDKL5-211ENST00000637881 TRAK2O60296 914 aa9.93□□□□□ -0.82
CDKL5-211ENST00000637881 MCM5P33992 734 aa9.93□□□□□ -0.82
CDKL5-211ENST00000637881 CHGAP10645 457 aaKnown RBP9.93□□□□□ -0.82
CDKL5-211ENST00000637881 IRX3P78415 501 aaPredicted RBP9.93□□□□□ -0.82
CDKL5-211ENST00000637881 SASS6Q6UVJ0 657 aa9.93□□□□□ -0.82
CDKL5-211ENST00000637881 BRD4O60885 1362 aaPredicted RBP9.92□□□□□ -0.82
CDKL5-211ENST00000637881 IBTKQ9P2D0 1353 aaPredicted RBP9.92□□□□□ -0.82
CDKL5-211ENST00000637881 PNISRQ8TF01 805 aaKnown RBP9.92□□□□□ -0.82
CDKL5-211ENST00000637881 EIF2AK4Q9P2K8 1649 aaKnown RBP9.92□□□□□ -0.82
CDKL5-211ENST00000637881 SPATA31E1Q6ZUB1 1445 aa9.92□□□□□ -0.82
CDKL5-211ENST00000637881 FAM135AQ9P2D6 1515 aa9.92□□□□□ -0.82
CDKL5-211ENST00000637881 DNAJC2Q99543 621 aaKnown RBP9.91□□□□□ -0.82
CDKL5-211ENST00000637881 USP19O94966 1318 aa9.91□□□□□ -0.82
CDKL5-211ENST00000637881 PZPP20742 1482 aa9.91□□□□□ -0.82
CDKL5-211ENST00000637881 BCORL1Q5H9F3 1711 aa9.91□□□□□ -0.82
CDKL5-211ENST00000637881 SKOR2Q2VWA4 1001 aaPredicted RBP9.91□□□□□ -0.82
CDKL5-211ENST00000637881 PRDM10Q9NQV6 1147 aa9.91□□□□□ -0.82
CDKL5-211ENST00000637881 CHMP5Q9NZZ3 219 aa9.91□□□□□ -0.82
CDKL5-211ENST00000637881 CFAP65Q6ZU64 1925 aaKnown RBP9.91□□□□□ -0.82
CDKL5-211ENST00000637881 ABCC3O15438 1527 aa9.9□□□□□ -0.82
CDKL5-211ENST00000637881 MROH1Q8NDA8 1641 aa9.9□□□□□ -0.82
CDKL5-211ENST00000637881 CLTCQ00610 1675 aaKnown RBP9.9□□□□□ -0.82
CDKL5-211ENST00000637881 RGS22Q8NE09 1264 aa9.9□□□□□ -0.82
CDKL5-211ENST00000637881 SECISBP2LQ93073 1101 aaKnown RBP9.9□□□□□ -0.82
CDKL5-211ENST00000637881 MADDQ8WXG6 1647 aa9.9□□□□□ -0.83
CDKL5-211ENST00000637881 E9PCH4 1651 aa9.89□□□□□ -0.83
CDKL5-211ENST00000637881 UNC13BO14795 1591 aa9.89□□□□□ -0.83
CDKL5-211ENST00000637881 CEP152O94986 1710 aa9.89□□□□□ -0.83
CDKL5-211ENST00000637881 MMP14P50281 582 aa9.89□□□□□ -0.83
CDKL5-211ENST00000637881 DNTTIP2Q5QJE6 756 aaKnown RBP9.89□□□□□ -0.83
CDKL5-211ENST00000637881 HOMEZQ8IX15 550 aa9.89□□□□□ -0.83
CDKL5-211ENST00000637881 RNF17Q9BXT8 1623 aaKnown RBP9.89□□□□□ -0.83
CDKL5-211ENST00000637881 KDM5DQ9BY66 1539 aa9.89□□□□□ -0.83
CDKL5-211ENST00000637881 STAG3Q9UJ98 1225 aa9.89□□□□□ -0.83
CDKL5-211ENST00000637881 NINLQ9Y2I6 1382 aa9.89□□□□□ -0.83
CDKL5-211ENST00000637881 R3HCC1Q9Y3T6 440 aaKnown RBP9.89□□□□□ -0.83
CDKL5-211ENST00000637881 PRDM15P57071 1507 aaPredicted RBP9.89□□□□□ -0.83
CDKL5-211ENST00000637881 RGL3Q3MIN7 710 aa9.88□□□□□ -0.83
CDKL5-211ENST00000637881 CHMP4AQ9BY43 222 aa9.88□□□□□ -0.83
CDKL5-211ENST00000637881 TSPYL1Q9H0U9 437 aa9.88□□□□□ -0.83
CDKL5-211ENST00000637881 RIMS1Q86UR5 1692 aaKnown RBP9.88□□□□□ -0.83
CDKL5-211ENST00000637881 NPATQ14207 1427 aa9.88□□□□□ -0.83
CDKL5-211ENST00000637881 EIF3AQ14152 1382 aaKnown RBP9.88□□□□□ -0.83
CDKL5-211ENST00000637881 KIF7Q2M1P5 1343 aa9.88□□□□□ -0.83
CDKL5-211ENST00000637881 CRBNQ96SW2 442 aa9.88□□□□□ -0.83
CDKL5-211ENST00000637881 NOL7Q9UMY1 257 aaKnown RBP9.88□□□□□ -0.83
CDKL5-211ENST00000637881 DEPDC5O75140 1603 aa9.87□□□□□ -0.83
CDKL5-211ENST00000637881 FER1L4A9Z1Z3 1794 aa9.87□□□□□ -0.83
CDKL5-211ENST00000637881 CACNB1Q02641 598 aaPredicted RBP9.87□□□□□ -0.83
CDKL5-211ENST00000637881 YY1AP1Q9H869 796 aa9.87□□□□□ -0.83
CDKL5-211ENST00000637881 MAPK8IP3Q9UPT6 1336 aa9.86□□□□□ -0.83
CDKL5-211ENST00000637881 IQGAP3Q86VI3 1631 aa9.86□□□□□ -0.83
CDKL5-211ENST00000637881 IDI1Q13907 227 aa9.86□□□□□ -0.83
CDKL5-211ENST00000637881 SLKQ9H2G2 1235 aaPredicted RBP9.86□□□□□ -0.83
CDKL5-211ENST00000637881 RNF39Q9H2S5 420 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms