RNA–Protein interactions for RNA: ENST00000636940.1

ARID1B-221, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 5

Gene ARID1B, Length 5,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-221ENST00000636940 CFTRP13569 1480 aa12.39□□□□□ -0.43
ARID1B-221ENST00000636940 DEKP35659 375 aaKnown RBP12.39□□□□□ -0.43
ARID1B-221ENST00000636940 CSPP1Q1MSJ5 1256 aa12.39□□□□□ -0.43
ARID1B-221ENST00000636940 KIF6Q6ZMV9 814 aa12.38□□□□□ -0.43
ARID1B-221ENST00000636940 ZSCAN29Q8IWY8 852 aaPredicted RBP12.38□□□□□ -0.43
ARID1B-221ENST00000636940 ZNF428Q96B54 188 aa12.38□□□□□ -0.43
ARID1B-221ENST00000636940 G3BP1Q13283 466 aaKnown RBP eCLIP12.38□□□□□ -0.434e-8■□□□□ 9.8
ARID1B-221ENST00000636940 WASHC4Q2M389 1173 aa12.38□□□□□ -0.43
ARID1B-221ENST00000636940 THEMISQ8N1K5 641 aaPredicted RBP12.38□□□□□ -0.43
ARID1B-221ENST00000636940 MYBBP1AQ9BQG0 1328 aaKnown RBP12.38□□□□□ -0.43
ARID1B-221ENST00000636940 CCDC97Q96F63 343 aaPredicted RBP12.38□□□□□ -0.43
ARID1B-221ENST00000636940 DHX57Q6P158 1386 aaKnown RBP12.38□□□□□ -0.43
ARID1B-221ENST00000636940 AFAP1Q8N556 730 aa12.38□□□□□ -0.43
ARID1B-221ENST00000636940 CABP2Q9NPB3 220 aa12.38□□□□□ -0.43
ARID1B-221ENST00000636940 DIAPH1O60610 1272 aaKnown RBP12.37□□□□□ -0.43
ARID1B-221ENST00000636940 KDM4AO75164 1064 aa12.37□□□□□ -0.43
ARID1B-221ENST00000636940 RIPK4P57078 832 aa12.37□□□□□ -0.43
ARID1B-221ENST00000636940 TPM1P09493 284 aa12.37□□□□□ -0.43
ARID1B-221ENST00000636940 C16orf71Q8IYS4 520 aaPredicted RBP12.37□□□□□ -0.43
ARID1B-221ENST00000636940 NLRP6P59044 892 aa12.37□□□□□ -0.43
ARID1B-221ENST00000636940 BICDL1Q6ZP65 573 aa12.37□□□□□ -0.43
ARID1B-221ENST00000636940 GPRASP1Q5JY77 1395 aa12.36□□□□□ -0.43
ARID1B-221ENST00000636940 CCAR2Q8N163 923 aaKnown RBP12.36□□□□□ -0.43
ARID1B-221ENST00000636940 GGNBP2Q9H3C7 697 aa12.36□□□□□ -0.43
ARID1B-221ENST00000636940 WDR78Q5VTH9 848 aa12.36□□□□□ -0.43
ARID1B-221ENST00000636940 FKBP5Q13451 457 aaPredicted RBP12.35□□□□□ -0.43
ARID1B-221ENST00000636940 FOSBP53539 338 aa12.35□□□□□ -0.43
ARID1B-221ENST00000636940 PLCD3Q8N3E9 789 aa12.35□□□□□ -0.43
ARID1B-221ENST00000636940 ABTB2Q8N961 1025 aa12.35□□□□□ -0.43
ARID1B-221ENST00000636940 ZKSCAN2Q63HK3 967 aa12.34□□□□□ -0.43
ARID1B-221ENST00000636940 CHMP4CQ96CF2 233 aa12.34□□□□□ -0.43
ARID1B-221ENST00000636940 ZNF219Q9P2Y4 722 aaPredicted RBP12.34□□□□□ -0.43
ARID1B-221ENST00000636940 ANKLE2Q86XL3 938 aa12.34□□□□□ -0.43
ARID1B-221ENST00000636940 CRBNQ96SW2 442 aa12.34□□□□□ -0.43
ARID1B-221ENST00000636940 USP47Q96K76 1375 aa12.34□□□□□ -0.43
ARID1B-221ENST00000636940 EXOC6Q8TAG9 804 aa12.34□□□□□ -0.43
ARID1B-221ENST00000636940 ST18O60284 1047 aa12.33□□□□□ -0.43
ARID1B-221ENST00000636940 ADAMTS2O95450 1211 aa12.33□□□□□ -0.44
ARID1B-221ENST00000636940 EPS15P42566 896 aa12.33□□□□□ -0.44
ARID1B-221ENST00000636940 TSPYL4Q9UJ04 414 aa12.33□□□□□ -0.44
ARID1B-221ENST00000636940 DNMBPQ6XZF7 1577 aa12.33□□□□□ -0.44
ARID1B-221ENST00000636940 IPO7O95373 1038 aaKnown RBP12.33□□□□□ -0.44
ARID1B-221ENST00000636940 RAPGEF3O95398 923 aa12.32□□□□□ -0.44
ARID1B-221ENST00000636940 NAP1L1P55209 391 aaKnown RBP12.32□□□□□ -0.44
ARID1B-221ENST00000636940 LAMC3Q9Y6N6 1575 aa12.32□□□□□ -0.44
ARID1B-221ENST00000636940 POLA1P09884 1462 aaPredicted RBP12.32□□□□□ -0.44
ARID1B-221ENST00000636940 ANKRD20A12PQ8NF67 263 aa12.32□□□□□ -0.44
ARID1B-221ENST00000636940 ANO2Q9NQ90 1003 aa12.32□□□□□ -0.44
ARID1B-221ENST00000636940 CA8P35219 290 aa12.31□□□□□ -0.44
ARID1B-221ENST00000636940 SCAPERQ9BY12 1400 aa12.31□□□□□ -0.44
ARID1B-221ENST00000636940 RALYLQ86SE5 291 aaKnown RBP12.3□□□□□ -0.44
ARID1B-221ENST00000636940 PRDM11Q9NQV5 511 aa12.3□□□□□ -0.44
ARID1B-221ENST00000636940 NGLY1Q96IV0 654 aa12.3□□□□□ -0.44
ARID1B-221ENST00000636940 E9PSI1 815 aa12.3□□□□□ -0.44
ARID1B-221ENST00000636940 CNNM1Q9NRU3 951 aa12.3□□□□□ -0.44
ARID1B-221ENST00000636940 MIA2Q96PC5 1412 aa12.3□□□□□ -0.44
ARID1B-221ENST00000636940 SAFBQ15424 915 aaKnown RBP eCLIP12.3□□□□□ -0.44
ARID1B-221ENST00000636940 HSP90AB2PQ58FF8 381 aa12.3□□□□□ -0.44
ARID1B-221ENST00000636940 STK11IPQ8N1F8 1099 aa12.3□□□□□ -0.44
ARID1B-221ENST00000636940 RUFY2Q8WXA3 655 aa12.29□□□□□ -0.44
ARID1B-221ENST00000636940 TMOD2Q9NZR1 351 aa12.29□□□□□ -0.44
ARID1B-221ENST00000636940 CLEC11AQ9Y240 323 aa12.29□□□□□ -0.44
ARID1B-221ENST00000636940 PLEKHH2Q8IVE3 1493 aa12.29□□□□□ -0.44
ARID1B-221ENST00000636940 SCLT1Q96NL6 688 aa12.29□□□□□ -0.44
ARID1B-221ENST00000636940 PHLDB1Q86UU1 1377 aa12.29□□□□□ -0.44
ARID1B-221ENST00000636940 BECN2A8MW95 431 aa12.29□□□□□ -0.44
ARID1B-221ENST00000636940 OFD1O75665 1012 aa12.29□□□□□ -0.44
ARID1B-221ENST00000636940 ZKSCAN1P17029 563 aaPredicted RBP12.29□□□□□ -0.44
ARID1B-221ENST00000636940 TBC1D2BQ9UPU7 963 aa12.29□□□□□ -0.44
ARID1B-221ENST00000636940 FYCO1Q9BQS8 1478 aa12.29□□□□□ -0.44
ARID1B-221ENST00000636940 RRP12Q5JTH9 1297 aaKnown RBP12.28□□□□□ -0.44
ARID1B-221ENST00000636940 TATP17735 454 aaPredicted RBP12.28□□□□□ -0.44
ARID1B-221ENST00000636940 GOLGA6L3A6NEY3 463 aa12.28□□□□□ -0.44
ARID1B-221ENST00000636940 SLC3A2P08195 630 aaKnown RBP12.28□□□□□ -0.44
ARID1B-221ENST00000636940 BRMS1Q9HCU9 246 aa12.28□□□□□ -0.44
ARID1B-221ENST00000636940 KRT18P05783 430 aaKnown RBP12.28□□□□□ -0.44
ARID1B-221ENST00000636940 CCDC70Q6NSX1 233 aa12.27□□□□□ -0.44
ARID1B-221ENST00000636940 PRKRIP1Q9H875 184 aaPredicted RBP12.27□□□□□ -0.44
ARID1B-221ENST00000636940 GNL3LQ9NVN8 582 aaKnown RBP12.27□□□□□ -0.44
ARID1B-221ENST00000636940 BCL11BQ9C0K0 894 aaPredicted RBP12.27□□□□□ -0.44
ARID1B-221ENST00000636940 GOLGA6L19H0YKK7 550 aa12.27□□□□□ -0.45
ARID1B-221ENST00000636940 MATR3P43243 847 aaKnown RBP eCLIP12.27□□□□□ -0.45
ARID1B-221ENST00000636940 CABP4P57796 275 aa12.27□□□□□ -0.45
ARID1B-221ENST00000636940 ANKRD50Q9ULJ7 1429 aa12.27□□□□□ -0.45
ARID1B-221ENST00000636940 PTMSP20962 102 aa12.27□□□□□ -0.45
ARID1B-221ENST00000636940 CASKIN1Q8WXD9 1431 aa12.26□□□□□ -0.45
ARID1B-221ENST00000636940 NEBLO76041 1014 aa12.26□□□□□ -0.45
ARID1B-221ENST00000636940 CDK5RAP3Q96JB5 506 aa12.26□□□□□ -0.45
ARID1B-221ENST00000636940 NCOA2Q15596 1464 aa12.26□□□□□ -0.45
ARID1B-221ENST00000636940 HECW1Q76N89 1606 aa12.26□□□□□ -0.45
ARID1B-221ENST00000636940 XPCQ01831 940 aaPredicted RBP12.26□□□□□ -0.45
ARID1B-221ENST00000636940 FGD6Q6ZV73 1430 aa12.26□□□□□ -0.45
ARID1B-221ENST00000636940 SYNJ1O43426 1573 aa12.26□□□□□ -0.45
ARID1B-221ENST00000636940 RRP1P56182 461 aaKnown RBP12.25□□□□□ -0.45
ARID1B-221ENST00000636940 PDCL3Q9H2J4 239 aa12.25□□□□□ -0.45
ARID1B-221ENST00000636940 RRBP1Q9P2E9 1410 aaKnown RBP12.25□□□□□ -0.45
ARID1B-221ENST00000636940 IPO9Q96P70 1041 aaKnown RBP12.24□□□□□ -0.45
ARID1B-221ENST00000636940 DZIP1LQ8IYY4 767 aaKnown RBP12.24□□□□□ -0.45
ARID1B-221ENST00000636940 HOOK1Q9UJC3 728 aaKnown RBP12.24□□□□□ -0.45
ARID1B-221ENST00000636940 SMG6Q86US8 1419 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms