RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 MYOM2P54296 1465 aa26.31■■□□□ 1.8
PNKP-225ENST00000636214 ABCC11Q96J66 1382 aa26.31■■□□□ 1.8
PNKP-225ENST00000636214 LAMC1P11047 1609 aa26.3■■□□□ 1.8
PNKP-225ENST00000636214 ORAI2Q96SN7 254 aa26.3■■□□□ 1.8
PNKP-225ENST00000636214 YTHDC2Q9H6S0 1430 aaKnown RBP26.3■■□□□ 1.8
PNKP-225ENST00000636214 WAPLQ7Z5K2 1190 aa26.29■■□□□ 1.8
PNKP-225ENST00000636214 HRCP23327 699 aa26.28■■□□□ 1.8
PNKP-225ENST00000636214 DHX57Q6P158 1386 aaKnown RBP26.28■■□□□ 1.8
PNKP-225ENST00000636214 ESCO1Q5FWF5 840 aa26.27■■□□□ 1.8
PNKP-225ENST00000636214 C14orf93Q9H972 538 aaKnown RBP26.27■■□□□ 1.8
PNKP-225ENST00000636214 PNPLA6Q8IY17 1366 aa26.26■■□□□ 1.79
PNKP-225ENST00000636214 NRXN1Q9ULB1 1477 aa26.25■■□□□ 1.79
PNKP-225ENST00000636214 NPHP3Q7Z494 1330 aa26.24■■□□□ 1.79
PNKP-225ENST00000636214 CFAP70Q5T0N1 1121 aa26.24■■□□□ 1.79
PNKP-225ENST00000636214 SOS2Q07890 1332 aaPredicted RBP26.23■■□□□ 1.79
PNKP-225ENST00000636214 PLEKHH1Q9ULM0 1364 aa26.21■■□□□ 1.79
PNKP-225ENST00000636214 NUTM2FA1L443 756 aa26.21■■□□□ 1.79
PNKP-225ENST00000636214 AFF2P51816 1311 aa26.2■■□□□ 1.79
PNKP-225ENST00000636214 SIRT1Q96EB6 747 aa26.2■■□□□ 1.78
PNKP-225ENST00000636214 C8orf37Q96NL8 207 aa26.2■■□□□ 1.78
PNKP-225ENST00000636214 KDM2AQ9Y2K7 1162 aa26.19■■□□□ 1.78
PNKP-225ENST00000636214 DCAF11Q8TEB1 546 aa26.18■■□□□ 1.78
PNKP-225ENST00000636214 POGKQ9P215 609 aa26.17■■□□□ 1.78
PNKP-225ENST00000636214 RXRBP28702 533 aa26.16■■□□□ 1.78
PNKP-225ENST00000636214 STAC3Q96MF2 364 aa26.16■■□□□ 1.78
PNKP-225ENST00000636214 FMN2Q9NZ56 1722 aa26.16■■□□□ 1.78
PNKP-225ENST00000636214 FOXO3O43524 673 aa26.15■■□□□ 1.78
PNKP-225ENST00000636214 ADAMTS2O95450 1211 aa26.15■■□□□ 1.78
PNKP-225ENST00000636214 SAFB2Q14151 953 aaKnown RBP eCLIP26.15■■□□□ 1.78
PNKP-225ENST00000636214 PRAM1Q96QH2 718 aa26.15■■□□□ 1.78
PNKP-225ENST00000636214 NGLY1Q96IV0 654 aa26.13■■□□□ 1.77
PNKP-225ENST00000636214 KIF1AQ12756 1690 aa26.12■■□□□ 1.77
PNKP-225ENST00000636214 XPCQ01831 940 aaPredicted RBP26.12■■□□□ 1.77
PNKP-225ENST00000636214 DLC1Q96QB1 1528 aa26.12■■□□□ 1.77
PNKP-225ENST00000636214 PXDNQ92626 1479 aa26.11■■□□□ 1.77
PNKP-225ENST00000636214 COL22A1Q8NFW1 1626 aaPredicted RBP26.08■■□□□ 1.77
PNKP-225ENST00000636214 TRAK1Q9UPV9 953 aa26.08■■□□□ 1.77
PNKP-225ENST00000636214 QTRT2Q9H974 415 aaKnown RBP26.07■■□□□ 1.76
PNKP-225ENST00000636214 ADGRB1O14514 1584 aa26.07■■□□□ 1.76
PNKP-225ENST00000636214 PHF8Q9UPP1 1060 aa26.06■■□□□ 1.76
PNKP-225ENST00000636214 CDK12Q9NYV4 1490 aaPredicted RBP26.04■■□□□ 1.76
PNKP-225ENST00000636214 RBM6P78332 1123 aaKnown RBP26.04■■□□□ 1.76
PNKP-225ENST00000636214 PSME1Q06323 249 aa26.04■■□□□ 1.76
PNKP-225ENST00000636214 RGPD8O14715 1765 aaPredicted RBP26.03■■□□□ 1.76
PNKP-225ENST00000636214 KRT28Q7Z3Y7 464 aa26.03■■□□□ 1.76
PNKP-225ENST00000636214 EIF3AQ14152 1382 aaKnown RBP26.03■■□□□ 1.76
PNKP-225ENST00000636214 USP21Q9UK80 565 aa26.02■■□□□ 1.76
PNKP-225ENST00000636214 ADGRB2O60241 1585 aa26■■□□□ 1.75
PNKP-225ENST00000636214 ANKARQ7Z5J8 1434 aa26■■□□□ 1.75
PNKP-225ENST00000636214 MINK1Q8N4C8 1332 aaPredicted RBP26■■□□□ 1.75
PNKP-225ENST00000636214 HIRIP3Q9BW71 556 aaPredicted RBP26■■□□□ 1.75
PNKP-225ENST00000636214 SPATA31A3Q5VYP0 1347 aa25.99■■□□□ 1.75
PNKP-225ENST00000636214 HAP1P54257 671 aaPredicted RBP25.99■■□□□ 1.75
PNKP-225ENST00000636214 TRPC5Q9UL62 973 aaPredicted RBP25.99■■□□□ 1.75
PNKP-225ENST00000636214 TNS3Q68CZ2 1445 aa25.97■■□□□ 1.75
PNKP-225ENST00000636214 LMOD2Q6P5Q4 547 aa25.96■■□□□ 1.75
PNKP-225ENST00000636214 MARF1Q9Y4F3 1742 aaKnown RBP25.96■■□□□ 1.75
PNKP-225ENST00000636214 FNBP4Q8N3X1 1017 aaPredicted RBP25.95■■□□□ 1.74
PNKP-225ENST00000636214 PMFBP1Q8TBY8 1022 aa25.94■■□□□ 1.74
PNKP-225ENST00000636214 RGS12O14924 1447 aa25.93■■□□□ 1.74
PNKP-225ENST00000636214 WASLO00401 505 aaPredicted RBP25.92■■□□□ 1.74
PNKP-225ENST00000636214 TULP4Q9NRJ4 1543 aa25.92■■□□□ 1.74
PNKP-225ENST00000636214 SBNO1A3KN83 1393 aa25.92■■□□□ 1.74
PNKP-225ENST00000636214 ARHGEF10O15013 1369 aa25.92■■□□□ 1.74
PNKP-225ENST00000636214 ARHGEF28Q8N1W1 1705 aaKnown RBP25.91■■□□□ 1.74
PNKP-225ENST00000636214 GPRASP1Q5JY77 1395 aa25.91■■□□□ 1.74
PNKP-225ENST00000636214 USP32Q8NFA0 1604 aa25.91■■□□□ 1.74
PNKP-225ENST00000636214 PLEKHG5O94827 1062 aa25.9■■□□□ 1.74
PNKP-225ENST00000636214 UPF1Q92900 1129 aaKnown RBP eCLIP25.9■■□□□ 1.74
PNKP-225ENST00000636214 KIAA1210Q9ULL0 1709 aa25.9■■□□□ 1.74
PNKP-225ENST00000636214 ATRNO75882 1429 aa25.89■■□□□ 1.74
PNKP-225ENST00000636214 NGDNQ8NEJ9 315 aaKnown RBP25.87■■□□□ 1.73
PNKP-225ENST00000636214 ITSN1Q15811 1721 aa25.84■■□□□ 1.73
PNKP-225ENST00000636214 BCL9LQ86UU0 1499 aa25.84■■□□□ 1.73
PNKP-225ENST00000636214 PRR36Q9H6K5 1346 aa25.84■■□□□ 1.73
PNKP-225ENST00000636214 UNC5CLQ8IV45 518 aa25.83■■□□□ 1.73
PNKP-225ENST00000636214 CABLES1Q8TDN4 633 aa25.83■■□□□ 1.73
PNKP-225ENST00000636214 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.82■■□□□ 1.72
PNKP-225ENST00000636214 ATAD2Q6PL18 1390 aa25.82■■□□□ 1.72
PNKP-225ENST00000636214 PAK3O75914 559 aaPredicted RBP25.8■■□□□ 1.72
PNKP-225ENST00000636214 NUDT16Q96DE0 195 aaKnown RBP25.8■■□□□ 1.72
PNKP-225ENST00000636214 GJD4Q96KN9 370 aaPredicted RBP25.8■■□□□ 1.72
PNKP-225ENST00000636214 SLIT2O94813 1529 aa25.79■■□□□ 1.72
PNKP-225ENST00000636214 CDK19Q9BWU1 502 aa25.79■■□□□ 1.72
PNKP-225ENST00000636214 ABCA3Q99758 1704 aa25.78■■□□□ 1.72
PNKP-225ENST00000636214 TRPM3Q9HCF6 1732 aaPredicted RBP25.78■■□□□ 1.72
PNKP-225ENST00000636214 NBPF1Q3BBV0 1214 aa25.78■■□□□ 1.72
PNKP-225ENST00000636214 ATP7BP35670 1465 aa25.78■■□□□ 1.72
PNKP-225ENST00000636214 NEUROD1Q13562 356 aa25.76■■□□□ 1.71
PNKP-225ENST00000636214 CENPJQ9HC77 1338 aaPredicted RBP25.75■■□□□ 1.71
PNKP-225ENST00000636214 L3MBTL2Q969R5 705 aa25.75■■□□□ 1.71
PNKP-225ENST00000636214 CCDC9Q9Y3X0 531 aaKnown RBP25.75■■□□□ 1.71
PNKP-225ENST00000636214 PLCH1Q4KWH8 1693 aa25.74■■□□□ 1.71
PNKP-225ENST00000636214 ALS2Q96Q42 1657 aa25.74■■□□□ 1.71
PNKP-225ENST00000636214 NWD2Q9ULI1 1742 aa25.74■■□□□ 1.71
PNKP-225ENST00000636214 SIN3AQ96ST3 1273 aa25.73■■□□□ 1.71
PNKP-225ENST00000636214 RALGAPBQ86X10 1494 aa25.72■■□□□ 1.71
PNKP-225ENST00000636214 SRPK2P78362 688 aaKnown RBP25.72■■□□□ 1.71
PNKP-225ENST00000636214 CCDC61Q9Y6R9 512 aa25.72■■□□□ 1.71
PNKP-225ENST00000636214 VPS72Q15906 364 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms