RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 LRP5O75197 1615 aa28.03■■■□□ 2.08
CLN6-212ENST00000636020 NPHP3Q7Z494 1330 aa28.03■■■□□ 2.08
CLN6-212ENST00000636020 MARF1Q9Y4F3 1742 aaKnown RBP28.03■■■□□ 2.08
CLN6-212ENST00000636020 SPHKAPQ2M3C7 1700 aa28.02■■■□□ 2.08
CLN6-212ENST00000636020 RALGAPBQ86X10 1494 aa28.01■■■□□ 2.07
CLN6-212ENST00000636020 UNC5CLQ8IV45 518 aa28■■■□□ 2.07
CLN6-212ENST00000636020 PXDNQ92626 1479 aa28■■■□□ 2.07
CLN6-212ENST00000636020 GLI3P10071 1580 aa27.99■■■□□ 2.07
CLN6-212ENST00000636020 PRAG1Q86YV5 1406 aa27.99■■■□□ 2.07
CLN6-212ENST00000636020 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.98■■■□□ 2.07
CLN6-212ENST00000636020 SF3B2Q13435 895 aaKnown RBP27.98■■■□□ 2.07
CLN6-212ENST00000636020 ESCO1Q5FWF5 840 aa27.98■■■□□ 2.07
CLN6-212ENST00000636020 SLIT2O94813 1529 aa27.96■■■□□ 2.07
CLN6-212ENST00000636020 HFM1A2PYH4 1435 aa27.95■■■□□ 2.07
CLN6-212ENST00000636020 FOXO3O43524 673 aa27.95■■■□□ 2.06
CLN6-212ENST00000636020 XPCQ01831 940 aaPredicted RBP27.95■■■□□ 2.06
CLN6-212ENST00000636020 BRWD3Q6RI45 1802 aa27.94■■■□□ 2.06
CLN6-212ENST00000636020 CLTCL1P53675 1640 aa27.92■■■□□ 2.06
CLN6-212ENST00000636020 VGFO15240 615 aaPredicted RBP27.92■■■□□ 2.06
CLN6-212ENST00000636020 SEPT12Q8IYM1 358 aa27.92■■■□□ 2.06
CLN6-212ENST00000636020 HRCP23327 699 aa27.89■■■□□ 2.06
CLN6-212ENST00000636020 LRPPRCP42704 1394 aaKnown RBP27.88■■■□□ 2.05
CLN6-212ENST00000636020 PSDA5PKW4 1024 aaPredicted RBP27.88■■■□□ 2.05
CLN6-212ENST00000636020 CDC42BPGQ6DT37 1551 aa27.87■■■□□ 2.05
CLN6-212ENST00000636020 ONECUT3O60422 494 aaPredicted RBP27.86■■■□□ 2.05
CLN6-212ENST00000636020 SPATA31A3Q5VYP0 1347 aa27.85■■■□□ 2.05
CLN6-212ENST00000636020 KIF1BO60333 1816 aa27.84■■■□□ 2.05
CLN6-212ENST00000636020 VPS72Q15906 364 aa27.84■■■□□ 2.05
CLN6-212ENST00000636020 KRT27Q7Z3Y8 459 aa27.83■■■□□ 2.05
CLN6-212ENST00000636020 NUTM2FA1L443 756 aa27.8■■■□□ 2.04
CLN6-212ENST00000636020 BAG6P46379 1132 aa27.8■■■□□ 2.04
CLN6-212ENST00000636020 USP32Q8NFA0 1604 aa27.79■■■□□ 2.04
CLN6-212ENST00000636020 NAIPQ13075 1403 aa27.79■■■□□ 2.04
CLN6-212ENST00000636020 ITGAEP38570 1179 aa27.79■■■□□ 2.04
CLN6-212ENST00000636020 RPGRIP1LQ68CZ1 1315 aa27.78■■■□□ 2.04
CLN6-212ENST00000636020 CCDC9Q9Y3X0 531 aaKnown RBP27.75■■■□□ 2.03
CLN6-212ENST00000636020 KRT28Q7Z3Y7 464 aa27.74■■■□□ 2.03
CLN6-212ENST00000636020 CCDC144AA2RUR9 1427 aa27.74■■■□□ 2.03
CLN6-212ENST00000636020 WAPLQ7Z5K2 1190 aa27.73■■■□□ 2.03
CLN6-212ENST00000636020 HAP1P54257 671 aaPredicted RBP27.71■■■□□ 2.03
CLN6-212ENST00000636020 CABLES1Q8TDN4 633 aa27.71■■■□□ 2.03
CLN6-212ENST00000636020 EN1Q05925 392 aaPredicted RBP27.7■■■□□ 2.02
CLN6-212ENST00000636020 NWD2Q9ULI1 1742 aa27.7■■■□□ 2.02
CLN6-212ENST00000636020 R3HDM1Q15032 1099 aaKnown RBP27.69■■■□□ 2.02
CLN6-212ENST00000636020 STK26Q9P289 416 aa27.68■■■□□ 2.02
CLN6-212ENST00000636020 PLCH1Q4KWH8 1693 aa27.68■■■□□ 2.02
CLN6-212ENST00000636020 TECPR2O15040 1411 aa27.67■■■□□ 2.02
CLN6-212ENST00000636020 KIF1AQ12756 1690 aa27.67■■■□□ 2.02
CLN6-212ENST00000636020 PPLO60437 1756 aa27.67■■■□□ 2.02
CLN6-212ENST00000636020 TNS3Q68CZ2 1445 aa27.66■■■□□ 2.02
CLN6-212ENST00000636020 A0A0G2JS52 829 aa27.65■■■□□ 2.02
CLN6-212ENST00000636020 FAM83GA6ND36 823 aa27.65■■■□□ 2.02
CLN6-212ENST00000636020 MYT1Q01538 1121 aa27.65■■■□□ 2.02
CLN6-212ENST00000636020 PLEKHH1Q9ULM0 1364 aa27.64■■■□□ 2.02
CLN6-212ENST00000636020 FAM98CQ17RN3 349 aaKnown RBP27.64■■■□□ 2.02
CLN6-212ENST00000636020 FMN2Q9NZ56 1722 aa27.64■■■□□ 2.01
CLN6-212ENST00000636020 PSME1Q06323 249 aa27.63■■■□□ 2.01
CLN6-212ENST00000636020 ABCC11Q96J66 1382 aa27.62■■■□□ 2.01
CLN6-212ENST00000636020 PLEKHG5O94827 1062 aa27.62■■■□□ 2.01
CLN6-212ENST00000636020 ADGRF5Q8IZF2 1346 aa27.61■■■□□ 2.01
CLN6-212ENST00000636020 YY1P25490 414 aa27.6■■■□□ 2.01
CLN6-212ENST00000636020 PHF8Q9UPP1 1060 aa27.6■■■□□ 2.01
CLN6-212ENST00000636020 SBNO1A3KN83 1393 aa27.6■■■□□ 2.01
CLN6-212ENST00000636020 DISP2A7MBM2 1401 aa27.59■■■□□ 2.01
CLN6-212ENST00000636020 RGPD1P0DJD0 1748 aa27.58■■■□□ 2.01
CLN6-212ENST00000636020 FAM182BQ5T319 152 aa27.58■■■□□ 2.01
CLN6-212ENST00000636020 ABCA3Q99758 1704 aa27.56■■■□□ 2
CLN6-212ENST00000636020 TMEM132EQ6IEE7 984 aa27.56■■■□□ 2
CLN6-212ENST00000636020 LMOD2Q6P5Q4 547 aa27.56■■■□□ 2
CLN6-212ENST00000636020 ARHGEF10O15013 1369 aa27.56■■■□□ 2
CLN6-212ENST00000636020 EZH2Q15910 746 aaKnown RBP27.55■■■□□ 2
CLN6-212ENST00000636020 NRAPQ86VF7 1730 aa27.54■■■□□ 2
CLN6-212ENST00000636020 BTG4Q9NY30 223 aa27.54■■■□□ 2
CLN6-212ENST00000636020 KNDC1Q76NI1 1749 aa27.53■■■□□ 2
CLN6-212ENST00000636020 RRBP1Q9P2E9 1410 aaKnown RBP27.53■■■□□ 2
CLN6-212ENST00000636020 RGPD8O14715 1765 aaPredicted RBP27.53■■■□□ 2
CLN6-212ENST00000636020 NRXN1Q9ULB1 1477 aa27.51■■■□□ 2
CLN6-212ENST00000636020 CAMKK2Q96RR4 588 aa27.51■■□□□ 1.99
CLN6-212ENST00000636020 SIRT1Q96EB6 747 aa27.5■■□□□ 1.99
CLN6-212ENST00000636020 TNS1Q9HBL0 1735 aaKnown RBP27.5■■□□□ 1.99
CLN6-212ENST00000636020 SPATA31A5Q5VU36 1347 aa27.49■■□□□ 1.99
CLN6-212ENST00000636020 SPATA31A7Q8IWB4 1347 aa27.49■■□□□ 1.99
CLN6-212ENST00000636020 SLC4A1APQ9BWU0 796 aaKnown RBP27.48■■□□□ 1.99
CLN6-212ENST00000636020 YTHDC2Q9H6S0 1430 aaKnown RBP27.48■■□□□ 1.99
CLN6-212ENST00000636020 IFT172Q9UG01 1749 aa27.46■■□□□ 1.99
CLN6-212ENST00000636020 RGL3Q3MIN7 710 aa27.45■■□□□ 1.98
CLN6-212ENST00000636020 ANKRD30BQ9BXX2 1392 aa27.45■■□□□ 1.98
CLN6-212ENST00000636020 THSD7AQ9UPZ6 1657 aa27.43■■□□□ 1.98
CLN6-212ENST00000636020 TRIM37O94972 964 aa27.43■■□□□ 1.98
CLN6-212ENST00000636020 COL14A1Q05707 1796 aaKnown RBP27.43■■□□□ 1.98
CLN6-212ENST00000636020 PMFBP1Q8TBY8 1022 aa27.42■■□□□ 1.98
CLN6-212ENST00000636020 PIK3C2GO75747 1445 aa27.41■■□□□ 1.98
CLN6-212ENST00000636020 PARD3Q8TEW0 1356 aa27.41■■□□□ 1.98
CLN6-212ENST00000636020 SPATA31E1Q6ZUB1 1445 aa27.41■■□□□ 1.98
CLN6-212ENST00000636020 FAM196AQ6ZSG2 479 aa27.4■■□□□ 1.98
CLN6-212ENST00000636020 ADGRB2O60241 1585 aa27.39■■□□□ 1.98
CLN6-212ENST00000636020 APBA3O96018 575 aa27.39■■□□□ 1.98
CLN6-212ENST00000636020 PPARGC1BQ86YN6 1023 aaKnown RBP27.37■■□□□ 1.97
CLN6-212ENST00000636020 TRPM3Q9HCF6 1732 aaPredicted RBP27.36■■□□□ 1.97
CLN6-212ENST00000636020 SPATA31A1Q5TZJ5 1347 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms