RNA–Protein interactions for RNA: ENST00000635721.1

SSRP1-205, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-205ENST00000635721 PTPRUQ92729 1446 aa10.23□□□□□ -0.77
SSRP1-205ENST00000635721 ADGRB1O14514 1584 aa10.22□□□□□ -0.77
SSRP1-205ENST00000635721 CHD2O14647 1828 aaKnown RBP10.22□□□□□ -0.77
SSRP1-205ENST00000635721 PPM1GO15355 546 aaPredicted RBP10.22□□□□□ -0.77
SSRP1-205ENST00000635721 CARD11Q9BXL7 1154 aa10.22□□□□□ -0.77
SSRP1-205ENST00000635721 STK26Q9P289 416 aa10.22□□□□□ -0.77
SSRP1-205ENST00000635721 ZBTB47Q9UFB7 747 aaPredicted RBP10.22□□□□□ -0.77
SSRP1-205ENST00000635721 STRCP1A6NGW2 1772 aa10.21□□□□□ -0.77
SSRP1-205ENST00000635721 TRAK1Q9UPV9 953 aa10.21□□□□□ -0.77
SSRP1-205ENST00000635721 TBX22Q9Y458 520 aa10.21□□□□□ -0.77
SSRP1-205ENST00000635721 LAMC1P11047 1609 aa10.2□□□□□ -0.78
SSRP1-205ENST00000635721 KIF7Q2M1P5 1343 aa10.2□□□□□ -0.78
SSRP1-205ENST00000635721 B4GALNT3Q6L9W6 998 aa10.2□□□□□ -0.78
SSRP1-205ENST00000635721 BRD4O60885 1362 aaPredicted RBP10.19□□□□□ -0.78
SSRP1-205ENST00000635721 GPRASP1Q5JY77 1395 aa10.19□□□□□ -0.78
SSRP1-205ENST00000635721 CCDC184Q52MB2 194 aa10.19□□□□□ -0.78
SSRP1-205ENST00000635721 RTL5Q5HYW3 569 aaPredicted RBP10.19□□□□□ -0.78
SSRP1-205ENST00000635721 PNISRQ8TF01 805 aaKnown RBP10.19□□□□□ -0.78
SSRP1-205ENST00000635721 ARHGEF28Q8N1W1 1705 aaKnown RBP10.19□□□□□ -0.78
SSRP1-205ENST00000635721 YTHDC2Q9H6S0 1430 aaKnown RBP10.18□□□□□ -0.78
SSRP1-205ENST00000635721 WAPLQ7Z5K2 1190 aa10.18□□□□□ -0.78
SSRP1-205ENST00000635721 POTEDQ86YR6 584 aa10.18□□□□□ -0.78
SSRP1-205ENST00000635721 AMOTL2Q9Y2J4 779 aa10.18□□□□□ -0.78
SSRP1-205ENST00000635721 PLEKHH1Q9ULM0 1364 aa10.17□□□□□ -0.78
SSRP1-205ENST00000635721 ST20-MTHFSA0A0A6YYL1 179 aa10.17□□□□□ -0.78
SSRP1-205ENST00000635721 PAK3O75914 559 aaPredicted RBP10.17□□□□□ -0.78
SSRP1-205ENST00000635721 PRKCSHP14314 528 aaPredicted RBP10.17□□□□□ -0.78
SSRP1-205ENST00000635721 RALBP1Q15311 655 aa10.17□□□□□ -0.78
SSRP1-205ENST00000635721 RBM33Q96EV2 1170 aaKnown RBP10.17□□□□□ -0.78
SSRP1-205ENST00000635721 CCDC136Q96JN2 1154 aa10.17□□□□□ -0.78
SSRP1-205ENST00000635721 USP47Q96K76 1375 aa10.16□□□□□ -0.78
SSRP1-205ENST00000635721 SAFB2Q14151 953 aaKnown RBP eCLIP10.16□□□□□ -0.78
SSRP1-205ENST00000635721 DIP2AQ14689 1571 aa10.16□□□□□ -0.78
SSRP1-205ENST00000635721 KNDC1Q76NI1 1749 aa10.16□□□□□ -0.78
SSRP1-205ENST00000635721 KCNA6P17658 529 aa10.15□□□□□ -0.78
SSRP1-205ENST00000635721 BACH2Q9BYV9 841 aa10.15□□□□□ -0.78
SSRP1-205ENST00000635721 XRN1Q8IZH2 1706 aaKnown RBP10.15□□□□□ -0.78
SSRP1-205ENST00000635721 ABCC11Q96J66 1382 aa10.14□□□□□ -0.79
SSRP1-205ENST00000635721 ROBO2Q9HCK4 1378 aa10.14□□□□□ -0.79
SSRP1-205ENST00000635721 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.14□□□□□ -0.79
SSRP1-205ENST00000635721 DDRGK1Q96HY6 314 aa10.14□□□□□ -0.79
SSRP1-205ENST00000635721 PRAM1Q96QH2 718 aa10.14□□□□□ -0.79
SSRP1-205ENST00000635721 QRICH2Q9H0J4 1663 aa10.14□□□□□ -0.79
SSRP1-205ENST00000635721 XIRP1Q702N8 1843 aaKnown RBP10.14□□□□□ -0.79
SSRP1-205ENST00000635721 ZNF335Q9H4Z2 1342 aaPredicted RBP10.13□□□□□ -0.79
SSRP1-205ENST00000635721 IRX6P78412 446 aaPredicted RBP10.13□□□□□ -0.79
SSRP1-205ENST00000635721 FAM9BQ8IZU0 186 aa10.13□□□□□ -0.79
SSRP1-205ENST00000635721 TESK2Q96S53 571 aa10.13□□□□□ -0.79
SSRP1-205ENST00000635721 CPS1P31327 1500 aa10.12□□□□□ -0.79
SSRP1-205ENST00000635721 DLC1Q96QB1 1528 aa10.12□□□□□ -0.79
SSRP1-205ENST00000635721 MINK1Q8N4C8 1332 aaPredicted RBP10.11□□□□□ -0.79
SSRP1-205ENST00000635721 NWD1Q149M9 1564 aa10.11□□□□□ -0.79
SSRP1-205ENST00000635721 POGKQ9P215 609 aa10.11□□□□□ -0.79
SSRP1-205ENST00000635721 PIK3R4Q99570 1358 aa10.11□□□□□ -0.79
SSRP1-205ENST00000635721 CENPJQ9HC77 1338 aaPredicted RBP10.1□□□□□ -0.79
SSRP1-205ENST00000635721 TECPR2O15040 1411 aa10.1□□□□□ -0.79
SSRP1-205ENST00000635721 PROSER2Q86WR7 435 aaPredicted RBP10.1□□□□□ -0.79
SSRP1-205ENST00000635721 SIRT1Q96EB6 747 aa10.1□□□□□ -0.79
SSRP1-205ENST00000635721 DMRT2Q9Y5R5 561 aa10.1□□□□□ -0.79
SSRP1-205ENST00000635721 RGPD8O14715 1765 aaPredicted RBP10.1□□□□□ -0.79
SSRP1-205ENST00000635721 PDE4AP27815 886 aa10.09□□□□□ -0.79
SSRP1-205ENST00000635721 RRP1P56182 461 aaKnown RBP10.09□□□□□ -0.79
SSRP1-205ENST00000635721 DISP3Q9P2K9 1392 aa10.09□□□□□ -0.79
SSRP1-205ENST00000635721 MYBBP1AQ9BQG0 1328 aaKnown RBP10.08□□□□□ -0.8
SSRP1-205ENST00000635721 NALCNQ8IZF0 1738 aa10.08□□□□□ -0.8
SSRP1-205ENST00000635721 FAM135BQ49AJ0 1406 aa10.07□□□□□ -0.8
SSRP1-205ENST00000635721 POLR3GLQ9BT43 218 aa10.07□□□□□ -0.8
SSRP1-205ENST00000635721 CABP2Q9NPB3 220 aa10.07□□□□□ -0.8
SSRP1-205ENST00000635721 LTBP4Q8N2S1 1624 aa10.07□□□□□ -0.8
SSRP1-205ENST00000635721 TULP4Q9NRJ4 1543 aa10.07□□□□□ -0.8
SSRP1-205ENST00000635721 PTCH1Q13635 1447 aa10.07□□□□□ -0.8
SSRP1-205ENST00000635721 EIF3AQ14152 1382 aaKnown RBP10.06□□□□□ -0.8
SSRP1-205ENST00000635721 PARD3Q8TEW0 1356 aa10.06□□□□□ -0.8
SSRP1-205ENST00000635721 NUTM2FA1L443 756 aa10.06□□□□□ -0.8
SSRP1-205ENST00000635721 CDK19Q9BWU1 502 aa10.06□□□□□ -0.8
SSRP1-205ENST00000635721 LRRC7Q96NW7 1537 aa10.06□□□□□ -0.8
SSRP1-205ENST00000635721 TMEM94Q12767 1356 aa10.05□□□□□ -0.8
SSRP1-205ENST00000635721 RCAN3Q9UKA8 241 aa10.05□□□□□ -0.8
SSRP1-205ENST00000635721 WASLO00401 505 aaPredicted RBP10.04□□□□□ -0.8
SSRP1-205ENST00000635721 TMF1P82094 1093 aa10.04□□□□□ -0.8
SSRP1-205ENST00000635721 NLRP13Q86W25 1043 aa10.04□□□□□ -0.8
SSRP1-205ENST00000635721 TMC1Q8TDI8 760 aa10.04□□□□□ -0.8
SSRP1-205ENST00000635721 UBE2Q2Q8WVN8 375 aa10.04□□□□□ -0.8
SSRP1-205ENST00000635721 BLMP54132 1417 aaPredicted RBP10.04□□□□□ -0.8
SSRP1-205ENST00000635721 NKTRP30414 1462 aaKnown RBP10.04□□□□□ -0.8
SSRP1-205ENST00000635721 USP32Q8NFA0 1604 aa10.04□□□□□ -0.8
SSRP1-205ENST00000635721 NBR1Q14596 966 aa10.03□□□□□ -0.8
SSRP1-205ENST00000635721 GSE1Q14687 1217 aa10.03□□□□□ -0.8
SSRP1-205ENST00000635721 PRR36Q9H6K5 1346 aa10.03□□□□□ -0.8
SSRP1-205ENST00000635721 SBNO2Q9Y2G9 1366 aa10.02□□□□□ -0.8
SSRP1-205ENST00000635721 FMN2Q9NZ56 1722 aa10.02□□□□□ -0.8
SSRP1-205ENST00000635721 SRPK2P78362 688 aaKnown RBP10.02□□□□□ -0.81
SSRP1-205ENST00000635721 C14orf37Q86TY3 774 aa10.02□□□□□ -0.81
SSRP1-205ENST00000635721 MYOM1P52179 1685 aa10.02□□□□□ -0.81
SSRP1-205ENST00000635721 EVC2Q86UK5 1308 aa10.02□□□□□ -0.81
SSRP1-205ENST00000635721 ADGRB2O60241 1585 aa10.01□□□□□ -0.81
SSRP1-205ENST00000635721 NGEFQ8N5V2 710 aa10.01□□□□□ -0.81
SSRP1-205ENST00000635721 ADGRL3Q9HAR2 1447 aa10□□□□□ -0.81
SSRP1-205ENST00000635721 NEFMP07197 916 aa10□□□□□ -0.81
SSRP1-205ENST00000635721 NUDT16Q96DE0 195 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms