RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 CCER1Q8TC90 406 aaPredicted RBP21.16■□□□□ 0.98
CDC42BPB-209ENST00000634889 PLEKHH1Q9ULM0 1364 aa21.15■□□□□ 0.98
CDC42BPB-209ENST00000634889 TIMELESSQ9UNS1 1208 aa21.14■□□□□ 0.97
CDC42BPB-209ENST00000634889 TRAK1Q9UPV9 953 aa21.14■□□□□ 0.97
CDC42BPB-209ENST00000634889 MST1RQ04912 1400 aa21.13■□□□□ 0.97
CDC42BPB-209ENST00000634889 NBPF1Q3BBV0 1214 aa21.13■□□□□ 0.97
CDC42BPB-209ENST00000634889 PRAM1Q96QH2 718 aa21.13■□□□□ 0.97
CDC42BPB-209ENST00000634889 ADGRB2O60241 1585 aa21.12■□□□□ 0.97
CDC42BPB-209ENST00000634889 POGKQ9P215 609 aa21.11■□□□□ 0.97
CDC42BPB-209ENST00000634889 ROCK2O75116 1388 aaKnown RBP21.1■□□□□ 0.97
CDC42BPB-209ENST00000634889 NBPF8Q3BBV2 869 aa21.1■□□□□ 0.97
CDC42BPB-209ENST00000634889 RALGAPBQ86X10 1494 aa21.09■□□□□ 0.97
CDC42BPB-209ENST00000634889 GPRASP1Q5JY77 1395 aa21.09■□□□□ 0.97
CDC42BPB-209ENST00000634889 FMN2Q9NZ56 1722 aa21.08■□□□□ 0.97
CDC42BPB-209ENST00000634889 C1orf167Q5SNV9 1468 aa21.07■□□□□ 0.96
CDC42BPB-209ENST00000634889 HSPA1LP34931 641 aa21.05■□□□□ 0.96
CDC42BPB-209ENST00000634889 SAFB2Q14151 953 aaKnown RBP eCLIP21.05■□□□□ 0.96
CDC42BPB-209ENST00000634889 AHDC1Q5TGY3 1603 aaPredicted RBP21.04■□□□□ 0.96
CDC42BPB-209ENST00000634889 BRINP3Q76B58 766 aa21.04■□□□□ 0.96
CDC42BPB-209ENST00000634889 PHLPP1O60346 1717 aa21.03■□□□□ 0.96
CDC42BPB-209ENST00000634889 EIF3AQ14152 1382 aaKnown RBP21.02■□□□□ 0.96
CDC42BPB-209ENST00000634889 NHSL1Q5SYE7 1610 aa21.02■□□□□ 0.96
CDC42BPB-209ENST00000634889 QRICH2Q9H0J4 1663 aa21.02■□□□□ 0.95
CDC42BPB-209ENST00000634889 MINK1Q8N4C8 1332 aaPredicted RBP21■□□□□ 0.95
CDC42BPB-209ENST00000634889 CENPJQ9HC77 1338 aaPredicted RBP21■□□□□ 0.95
CDC42BPB-209ENST00000634889 ANKARQ7Z5J8 1434 aa20.99■□□□□ 0.95
CDC42BPB-209ENST00000634889 COL16A1Q07092 1604 aaPredicted RBP20.99■□□□□ 0.95
CDC42BPB-209ENST00000634889 CARD11Q9BXL7 1154 aa20.98■□□□□ 0.95
CDC42BPB-209ENST00000634889 KIF1AQ12756 1690 aa20.98■□□□□ 0.95
CDC42BPB-209ENST00000634889 TULP4Q9NRJ4 1543 aa20.98■□□□□ 0.95
CDC42BPB-209ENST00000634889 HIRIP3Q9BW71 556 aaPredicted RBP20.97■□□□□ 0.95
CDC42BPB-209ENST00000634889 USP32Q8NFA0 1604 aa20.96■□□□□ 0.95
CDC42BPB-209ENST00000634889 WASLO00401 505 aaPredicted RBP20.96■□□□□ 0.95
CDC42BPB-209ENST00000634889 ORAI2Q96SN7 254 aa20.96■□□□□ 0.95
CDC42BPB-209ENST00000634889 RGPD8O14715 1765 aaPredicted RBP20.95■□□□□ 0.94
CDC42BPB-209ENST00000634889 ESCO1Q5FWF5 840 aa20.95■□□□□ 0.94
CDC42BPB-209ENST00000634889 NUTM2FA1L443 756 aa20.94■□□□□ 0.94
CDC42BPB-209ENST00000634889 SBNO2Q9Y2G9 1366 aa20.93■□□□□ 0.94
CDC42BPB-209ENST00000634889 ITSN1Q15811 1721 aa20.92■□□□□ 0.94
CDC42BPB-209ENST00000634889 ATP7BP35670 1465 aa20.91■□□□□ 0.94
CDC42BPB-209ENST00000634889 NPHP3Q7Z494 1330 aa20.9■□□□□ 0.94
CDC42BPB-209ENST00000634889 CDK19Q9BWU1 502 aa20.89■□□□□ 0.93
CDC42BPB-209ENST00000634889 SHPRHQ149N8 1683 aa20.89■□□□□ 0.93
CDC42BPB-209ENST00000634889 TOPAZ1Q8N9V7 1692 aa20.89■□□□□ 0.93
CDC42BPB-209ENST00000634889 JCADQ9P266 1359 aa20.88■□□□□ 0.93
CDC42BPB-209ENST00000634889 SOS2Q07890 1332 aaPredicted RBP20.88■□□□□ 0.93
CDC42BPB-209ENST00000634889 PRR36Q9H6K5 1346 aa20.88■□□□□ 0.93
CDC42BPB-209ENST00000634889 PHF8Q9UPP1 1060 aa20.88■□□□□ 0.93
CDC42BPB-209ENST00000634889 DDX17Q92841 729 aaKnown RBP20.87■□□□□ 0.93
CDC42BPB-209ENST00000634889 PXDNQ92626 1479 aa20.87■□□□□ 0.93
CDC42BPB-209ENST00000634889 EVC2Q86UK5 1308 aa20.86■□□□□ 0.93
CDC42BPB-209ENST00000634889 LRRC59Q96AG4 307 aaKnown RBP20.86■□□□□ 0.93
CDC42BPB-209ENST00000634889 FOXO3O43524 673 aa20.85■□□□□ 0.93
CDC42BPB-209ENST00000634889 NUDT16Q96DE0 195 aaKnown RBP20.85■□□□□ 0.93
CDC42BPB-209ENST00000634889 SRPK2P78362 688 aaKnown RBP20.84■□□□□ 0.93
CDC42BPB-209ENST00000634889 USP47Q96K76 1375 aa20.84■□□□□ 0.93
CDC42BPB-209ENST00000634889 CCDC61Q9Y6R9 512 aa20.83■□□□□ 0.93
CDC42BPB-209ENST00000634889 MED1Q15648 1581 aaPredicted RBP20.82■□□□□ 0.92
CDC42BPB-209ENST00000634889 SLC24A1O60721 1099 aa20.82■□□□□ 0.92
CDC42BPB-209ENST00000634889 SPATA31A6Q5VVP1 1343 aa20.8■□□□□ 0.92
CDC42BPB-209ENST00000634889 ST20-MTHFSA0A0A6YYL1 179 aa20.8■□□□□ 0.92
CDC42BPB-209ENST00000634889 PMFBP1Q8TBY8 1022 aa20.8■□□□□ 0.92
CDC42BPB-209ENST00000634889 CABP2Q9NPB3 220 aa20.8■□□□□ 0.92
CDC42BPB-209ENST00000634889 COL22A1Q8NFW1 1626 aaPredicted RBP20.79■□□□□ 0.92
CDC42BPB-209ENST00000634889 PNPLA6Q8IY17 1366 aa20.79■□□□□ 0.92
CDC42BPB-209ENST00000634889 PPIP5K1Q6PFW1 1433 aa20.78■□□□□ 0.92
CDC42BPB-209ENST00000634889 POLR3AO14802 1390 aaPredicted RBP20.78■□□□□ 0.92
CDC42BPB-209ENST00000634889 ATAD2Q6PL18 1390 aa20.78■□□□□ 0.92
CDC42BPB-209ENST00000634889 PSME1Q06323 249 aa20.78■□□□□ 0.92
CDC42BPB-209ENST00000634889 KRT28Q7Z3Y7 464 aa20.78■□□□□ 0.92
CDC42BPB-209ENST00000634889 TESK2Q96S53 571 aa20.78■□□□□ 0.92
CDC42BPB-209ENST00000634889 SBNO1A3KN83 1393 aa20.77■□□□□ 0.92
CDC42BPB-209ENST00000634889 PLEKHG3A1L390 1219 aa20.77■□□□□ 0.92
CDC42BPB-209ENST00000634889 XPCQ01831 940 aaPredicted RBP20.77■□□□□ 0.92
CDC42BPB-209ENST00000634889 TRPM3Q9HCF6 1732 aaPredicted RBP20.77■□□□□ 0.92
CDC42BPB-209ENST00000634889 NGDNQ8NEJ9 315 aaKnown RBP20.76■□□□□ 0.91
CDC42BPB-209ENST00000634889 TNS3Q68CZ2 1445 aa20.76■□□□□ 0.91
CDC42BPB-209ENST00000634889 PUS7Q96PZ0 661 aaKnown RBP20.75■□□□□ 0.91
CDC42BPB-209ENST00000634889 SPATA31A3Q5VYP0 1347 aa20.75■□□□□ 0.91
CDC42BPB-209ENST00000634889 ACEP12821 1306 aa20.73■□□□□ 0.91
CDC42BPB-209ENST00000634889 ALS2Q96Q42 1657 aa20.72■□□□□ 0.91
CDC42BPB-209ENST00000634889 ARHGEF10O15013 1369 aa20.72■□□□□ 0.91
CDC42BPB-209ENST00000634889 LRP6O75581 1613 aa20.71■□□□□ 0.91
CDC42BPB-209ENST00000634889 TMF1P82094 1093 aa20.7■□□□□ 0.9
CDC42BPB-209ENST00000634889 CABP1Q9NZU7 370 aa20.7■□□□□ 0.9
CDC42BPB-209ENST00000634889 BRD4O60885 1362 aaPredicted RBP20.7■□□□□ 0.9
CDC42BPB-209ENST00000634889 EIF4G2P78344 907 aaKnown RBP eCLIP20.69■□□□□ 0.9
CDC42BPB-209ENST00000634889 AKAP12Q02952 1782 aa20.69■□□□□ 0.9
CDC42BPB-209ENST00000634889 NINLQ9Y2I6 1382 aa20.68■□□□□ 0.9
CDC42BPB-209ENST00000634889 DISP3Q9P2K9 1392 aa20.67■□□□□ 0.9
CDC42BPB-209ENST00000634889 USP6P35125 1406 aa20.67■□□□□ 0.9
CDC42BPB-209ENST00000634889 CDCA8Q53HL2 280 aa20.66■□□□□ 0.9
CDC42BPB-209ENST00000634889 ABCA3Q99758 1704 aa20.65■□□□□ 0.9
CDC42BPB-209ENST00000634889 CPSF1Q10570 1443 aaKnown RBP20.65■□□□□ 0.9
CDC42BPB-209ENST00000634889 NUTM2BA6NNL0 878 aaPredicted RBP20.65■□□□□ 0.9
CDC42BPB-209ENST00000634889 NUTM2EB1AL46 878 aaPredicted RBP20.65■□□□□ 0.9
CDC42BPB-209ENST00000634889 NUTM2AQ8IVF1 878 aaPredicted RBP20.65■□□□□ 0.9
CDC42BPB-209ENST00000634889 ZNF692Q9BU19 519 aaPredicted RBP20.65■□□□□ 0.9
CDC42BPB-209ENST00000634889 MON2Q7Z3U7 1717 aa20.64■□□□□ 0.9
CDC42BPB-209ENST00000634889 PAK3O75914 559 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms