RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 C14orf93Q9H972 538 aaKnown RBP9.64□□□□□ -0.87
BRCA1-230ENST00000634433 PANK3Q9H999 370 aa9.64□□□□□ -0.87
BRCA1-230ENST00000634433 ZBED9Q6R2W3 1325 aa9.64□□□□□ -0.87
BRCA1-230ENST00000634433 ZNF142P52746 1687 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-230ENST00000634433 SETBP1Q9Y6X0 1596 aa9.63□□□□□ -0.87
BRCA1-230ENST00000634433 NLRP13Q86W25 1043 aa9.63□□□□□ -0.87
BRCA1-230ENST00000634433 SUPT16HQ9Y5B9 1047 aaKnown RBP9.63□□□□□ -0.87
BRCA1-230ENST00000634433 CFAP65Q6ZU64 1925 aaKnown RBP9.63□□□□□ -0.87
BRCA1-230ENST00000634433 PARD3Q8TEW0 1356 aa9.63□□□□□ -0.87
BRCA1-230ENST00000634433 CNGB1Q14028 1251 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-230ENST00000634433 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-230ENST00000634433 PIK3C2BO00750 1634 aa9.62□□□□□ -0.87
BRCA1-230ENST00000634433 PNISRQ8TF01 805 aaKnown RBP9.62□□□□□ -0.87
BRCA1-230ENST00000634433 KNSTRNQ9Y448 316 aa9.62□□□□□ -0.87
BRCA1-230ENST00000634433 PIK3C2GO75747 1445 aa9.62□□□□□ -0.87
BRCA1-230ENST00000634433 SBNO2Q9Y2G9 1366 aa9.62□□□□□ -0.87
BRCA1-230ENST00000634433 PPLO60437 1756 aa9.62□□□□□ -0.87
BRCA1-230ENST00000634433 ZFYVE9O95405 1425 aa9.61□□□□□ -0.87
BRCA1-230ENST00000634433 IDI1Q13907 227 aa9.61□□□□□ -0.87
BRCA1-230ENST00000634433 SYNMO15061 1565 aa9.61□□□□□ -0.87
BRCA1-230ENST00000634433 CENPJQ9HC77 1338 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-230ENST00000634433 IRX6P78412 446 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-230ENST00000634433 BCL11BQ9C0K0 894 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-230ENST00000634433 NPC1L1Q9UHC9 1359 aa9.59□□□□□ -0.87
BRCA1-230ENST00000634433 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.59□□□□□ -0.87
BRCA1-230ENST00000634433 BBXQ8WY36 941 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-230ENST00000634433 PUS7Q96PZ0 661 aaKnown RBP9.59□□□□□ -0.87
BRCA1-230ENST00000634433 ESF1Q9H501 851 aaKnown RBP9.59□□□□□ -0.87
BRCA1-230ENST00000634433 INSRP06213 1382 aa9.58□□□□□ -0.88
BRCA1-230ENST00000634433 LRPPRCP42704 1394 aaKnown RBP9.58□□□□□ -0.88
BRCA1-230ENST00000634433 MYO3AQ8NEV4 1616 aa9.58□□□□□ -0.88
BRCA1-230ENST00000634433 HSP90B1P14625 803 aaKnown RBP9.58□□□□□ -0.88
BRCA1-230ENST00000634433 CC2D1BQ5T0F9 858 aaKnown RBP9.58□□□□□ -0.88
BRCA1-230ENST00000634433 STAG3Q9UJ98 1225 aa9.58□□□□□ -0.88
BRCA1-230ENST00000634433 ERVK-7P63135 1459 aa9.58□□□□□ -0.88
BRCA1-230ENST00000634433 NEXMIFQ5QGS0 1516 aa9.57□□□□□ -0.88
BRCA1-230ENST00000634433 KDM5AP29375 1690 aaKnown RBP9.57□□□□□ -0.88
BRCA1-230ENST00000634433 TRAK1Q9UPV9 953 aa9.57□□□□□ -0.88
BRCA1-230ENST00000634433 ERICH6BQ5W0A0 696 aa9.57□□□□□ -0.88
BRCA1-230ENST00000634433 IFNLR1Q8IU57 520 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-230ENST00000634433 CPS1P31327 1500 aa9.56□□□□□ -0.88
BRCA1-230ENST00000634433 ADGRB1O14514 1584 aa9.56□□□□□ -0.88
BRCA1-230ENST00000634433 ASXL1Q8IXJ9 1541 aa9.55□□□□□ -0.88
BRCA1-230ENST00000634433 FBXO31Q5XUX0 539 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-230ENST00000634433 MED1Q15648 1581 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-230ENST00000634433 TMEM132EQ6IEE7 984 aa9.55□□□□□ -0.88
BRCA1-230ENST00000634433 TMEM131LA2VDJ0 1609 aa9.55□□□□□ -0.88
BRCA1-230ENST00000634433 MLECQ14165 292 aa9.54□□□□□ -0.88
BRCA1-230ENST00000634433 EVC2Q86UK5 1308 aa9.54□□□□□ -0.88
BRCA1-230ENST00000634433 HDGFP51858 240 aaKnown RBP9.53□□□□□ -0.88
BRCA1-230ENST00000634433 SMG6Q86US8 1419 aaKnown RBP9.53□□□□□ -0.88
BRCA1-230ENST00000634433 NUTM2DQ5VT03 806 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-230ENST00000634433 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.53□□□□□ -0.88
BRCA1-230ENST00000634433 NUDCQ9Y266 331 aa9.53□□□□□ -0.88
BRCA1-230ENST00000634433 CLTCQ00610 1675 aaKnown RBP9.52□□□□□ -0.88
BRCA1-230ENST00000634433 PDE3BQ13370 1112 aa9.52□□□□□ -0.88
BRCA1-230ENST00000634433 FOXD4L5Q5VV16 416 aaPredicted RBP9.52□□□□□ -0.88
BRCA1-230ENST00000634433 FOXD4L4Q8WXT5 416 aaPredicted RBP9.52□□□□□ -0.88
BRCA1-230ENST00000634433 PPP2R1AP30153 589 aa9.52□□□□□ -0.89
BRCA1-230ENST00000634433 PIAS4Q8N2W9 510 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-230ENST00000634433 ZMYM3Q14202 1370 aa9.51□□□□□ -0.89
BRCA1-230ENST00000634433 ZBTB7CA1YPR0 619 aa9.51□□□□□ -0.89
BRCA1-230ENST00000634433 TAF7LQ5H9L4 462 aa9.51□□□□□ -0.89
BRCA1-230ENST00000634433 MYOM1P52179 1685 aa9.51□□□□□ -0.89
BRCA1-230ENST00000634433 QRICH2Q9H0J4 1663 aa9.51□□□□□ -0.89
BRCA1-230ENST00000634433 CEP170BQ9Y4F5 1589 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-230ENST00000634433 WDR43Q15061 677 aaKnown RBP eCLIP9.5□□□□□ -0.89
BRCA1-230ENST00000634433 NINLQ9Y2I6 1382 aa9.5□□□□□ -0.89
BRCA1-230ENST00000634433 CEBPAP49715 358 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-230ENST00000634433 A2ML1A8K2U0 1454 aa9.5□□□□□ -0.89
BRCA1-230ENST00000634433 POGKQ9P215 609 aa9.49□□□□□ -0.89
BRCA1-230ENST00000634433 RIMS2Q9UQ26 1411 aa9.49□□□□□ -0.89
BRCA1-230ENST00000634433 UBAP1LF5GYI3 381 aa9.49□□□□□ -0.89
BRCA1-230ENST00000634433 SPRYD3Q8NCJ5 442 aa9.49□□□□□ -0.89
BRCA1-230ENST00000634433 MYO5BQ9ULV0 1848 aa9.49□□□□□ -0.89
BRCA1-230ENST00000634433 YTHDC2Q9H6S0 1430 aaKnown RBP9.48□□□□□ -0.89
BRCA1-230ENST00000634433 CARD14Q9BXL6 1004 aa9.48□□□□□ -0.89
BRCA1-230ENST00000634433 STK26Q9P289 416 aa9.48□□□□□ -0.89
BRCA1-230ENST00000634433 BLMP54132 1417 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-230ENST00000634433 MTMR7Q9Y216 660 aa9.48□□□□□ -0.89
BRCA1-230ENST00000634433 ARHGEF28Q8N1W1 1705 aaKnown RBP9.48□□□□□ -0.89
BRCA1-230ENST00000634433 ALKQ9UM73 1620 aa9.47□□□□□ -0.89
BRCA1-230ENST00000634433 CCDC136Q96JN2 1154 aa9.47□□□□□ -0.89
BRCA1-230ENST00000634433 SLC12A5Q9H2X9 1139 aa9.47□□□□□ -0.89
BRCA1-230ENST00000634433 TNRQ92752 1358 aa9.47□□□□□ -0.89
BRCA1-230ENST00000634433 CGNL1Q0VF96 1302 aa9.47□□□□□ -0.89
BRCA1-230ENST00000634433 ATAD2Q6PL18 1390 aa9.47□□□□□ -0.89
BRCA1-230ENST00000634433 NSD2O96028 1365 aa9.46□□□□□ -0.89
BRCA1-230ENST00000634433 ANKRD36BQ8N2N9 1353 aa9.46□□□□□ -0.89
BRCA1-230ENST00000634433 RAD21O60216 631 aa9.46□□□□□ -0.89
BRCA1-230ENST00000634433 TOM1O60784 492 aa9.46□□□□□ -0.89
BRCA1-230ENST00000634433 MORC1Q86VD1 984 aa9.46□□□□□ -0.89
BRCA1-230ENST00000634433 NSD3Q9BZ95 1437 aa9.46□□□□□ -0.89
BRCA1-230ENST00000634433 KCTD17Q8N5Z5 321 aa9.46□□□□□ -0.9
BRCA1-230ENST00000634433 PRAM1Q96QH2 718 aa9.46□□□□□ -0.9
BRCA1-230ENST00000634433 SENP3Q9H4L4 574 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-230ENST00000634433 PPP4R2Q9NY27 417 aa9.46□□□□□ -0.9
BRCA1-230ENST00000634433 ADAMTS8Q9UP79 889 aa9.46□□□□□ -0.9
BRCA1-230ENST00000634433 SRPK2P78362 688 aaKnown RBP9.45□□□□□ -0.9
BRCA1-230ENST00000634433 NGEFQ8N5V2 710 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms