RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-208ENST00000634348 PDILTQ8N807 584 aa13.61□□□□□ -0.23
SRSF4-208ENST00000634348 SUDS3Q9H7L9 328 aaPredicted RBP13.61□□□□□ -0.23
SRSF4-208ENST00000634348 CNKSR2Q8WXI2 1034 aa13.61□□□□□ -0.23
SRSF4-208ENST00000634348 MTMR7Q9Y216 660 aa13.61□□□□□ -0.23
SRSF4-208ENST00000634348 FAM161AQ3B820 660 aa13.61□□□□□ -0.23
SRSF4-208ENST00000634348 CHMP5Q9NZZ3 219 aa13.61□□□□□ -0.23
SRSF4-208ENST00000634348 ZFYVE27Q5T4F4 411 aa13.6□□□□□ -0.23
SRSF4-208ENST00000634348 WDR66Q8TBY9 1149 aa13.6□□□□□ -0.23
SRSF4-208ENST00000634348 HNRNPMP52272 730 aaKnown RBP eCLIP13.6□□□□□ -0.232e-6■■■■□ 23.4
SRSF4-208ENST00000634348 IBSPP21815 317 aaPredicted RBP13.6□□□□□ -0.23
SRSF4-208ENST00000634348 TAX1BP1Q86VP1 789 aa13.6□□□□□ -0.23
SRSF4-208ENST00000634348 TTLL5Q6EMB2 1281 aa13.6□□□□□ -0.23
SRSF4-208ENST00000634348 L3MBTL2Q969R5 705 aa13.6□□□□□ -0.23
SRSF4-208ENST00000634348 ZMYND15Q9H091 742 aa13.6□□□□□ -0.23
SRSF4-208ENST00000634348 TERF2IPQ9NYB0 399 aa13.6□□□□□ -0.23
SRSF4-208ENST00000634348 DAAM2Q86T65 1068 aa13.6□□□□□ -0.23
SRSF4-208ENST00000634348 CEP164Q9UPV0 1460 aa13.59□□□□□ -0.23
SRSF4-208ENST00000634348 OFD1O75665 1012 aa13.59□□□□□ -0.23
SRSF4-208ENST00000634348 TDO2P48775 406 aa13.58□□□□□ -0.23
SRSF4-208ENST00000634348 IL27Q8NEV9 243 aa13.58□□□□□ -0.23
SRSF4-208ENST00000634348 ZNF428Q96B54 188 aa13.58□□□□□ -0.24
SRSF4-208ENST00000634348 ANO2Q9NQ90 1003 aa13.58□□□□□ -0.24
SRSF4-208ENST00000634348 VPS37CA5D8V6 355 aaPredicted RBP13.58□□□□□ -0.24
SRSF4-208ENST00000634348 CCDC112Q8NEF3 446 aa13.58□□□□□ -0.24
SRSF4-208ENST00000634348 PRDM10Q9NQV6 1147 aa13.58□□□□□ -0.24
SRSF4-208ENST00000634348 MICALCLQ6ZW33 695 aa13.58□□□□□ -0.24
SRSF4-208ENST00000634348 FAM114A1Q8IWE2 563 aa13.58□□□□□ -0.24
SRSF4-208ENST00000634348 CPSF2Q9P2I0 782 aaKnown RBP13.58□□□□□ -0.24
SRSF4-208ENST00000634348 GBP2P32456 591 aaPredicted RBP13.58□□□□□ -0.24
SRSF4-208ENST00000634348 CFAP45Q9UL16 551 aa13.58□□□□□ -0.24
SRSF4-208ENST00000634348 HOMEZQ8IX15 550 aa13.57□□□□□ -0.24
SRSF4-208ENST00000634348 SMARCE1Q969G3 411 aa13.57□□□□□ -0.24
SRSF4-208ENST00000634348 PANK3Q9H999 370 aa13.57□□□□□ -0.24
SRSF4-208ENST00000634348 EPS15P42566 896 aa13.57□□□□□ -0.24
SRSF4-208ENST00000634348 MAP2K1Q02750 393 aaPredicted RBP13.57□□□□□ -0.24
SRSF4-208ENST00000634348 OLFM4Q6UX06 510 aa13.57□□□□□ -0.24
SRSF4-208ENST00000634348 C9orf78Q9NZ63 289 aaPredicted RBP13.57□□□□□ -0.24
SRSF4-208ENST00000634348 RAB3GAP2Q9H2M9 1393 aa13.57□□□□□ -0.24
SRSF4-208ENST00000634348 SYNE3Q6ZMZ3 975 aa13.57□□□□□ -0.24
SRSF4-208ENST00000634348 LETM1O95202 739 aaPredicted RBP13.57□□□□□ -0.24
SRSF4-208ENST00000634348 KIAA1328Q86T90 577 aa13.57□□□□□ -0.24
SRSF4-208ENST00000634348 KLHL34Q8N239 644 aa13.56□□□□□ -0.24
SRSF4-208ENST00000634348 EVA1CP58658 441 aa13.56□□□□□ -0.24
SRSF4-208ENST00000634348 TRIM29Q14134 588 aa13.56□□□□□ -0.24
SRSF4-208ENST00000634348 BRPF3Q9ULD4 1205 aa13.56□□□□□ -0.24
SRSF4-208ENST00000634348 FYB1O15117 783 aa13.56□□□□□ -0.24
SRSF4-208ENST00000634348 LMOD3Q0VAK6 560 aa13.56□□□□□ -0.24
SRSF4-208ENST00000634348 CCDC102AQ96A19 550 aa13.56□□□□□ -0.24
SRSF4-208ENST00000634348 NUCB2P80303 420 aa13.55□□□□□ -0.24
SRSF4-208ENST00000634348 DHX8Q14562 1220 aaKnown RBP13.55□□□□□ -0.24
SRSF4-208ENST00000634348 NLRP13Q86W25 1043 aa13.55□□□□□ -0.24
SRSF4-208ENST00000634348 MNAT1P51948 309 aa13.55□□□□□ -0.24
SRSF4-208ENST00000634348 CCDC91Q7Z6B0 441 aa13.55□□□□□ -0.24
SRSF4-208ENST00000634348 CPLX1O14810 134 aa13.55□□□□□ -0.24
SRSF4-208ENST00000634348 STAMBPO95630 424 aa13.55□□□□□ -0.24
SRSF4-208ENST00000634348 ST20-MTHFSA0A0A6YYL1 179 aa13.54□□□□□ -0.24
SRSF4-208ENST00000634348 TMCO3Q6UWJ1 677 aa13.54□□□□□ -0.24
SRSF4-208ENST00000634348 TRIM34Q9BYJ4 488 aa13.54□□□□□ -0.24
SRSF4-208ENST00000634348 TRIM5Q9C035 493 aa13.54□□□□□ -0.24
SRSF4-208ENST00000634348 SWAP70Q9UH65 585 aa13.54□□□□□ -0.24
SRSF4-208ENST00000634348 FAM193AP78312 1265 aa13.54□□□□□ -0.24
SRSF4-208ENST00000634348 PDCL3Q9H2J4 239 aa13.54□□□□□ -0.24
SRSF4-208ENST00000634348 TIGD1Q96MW7 591 aa13.54□□□□□ -0.24
SRSF4-208ENST00000634348 CTDP1Q9Y5B0 961 aaPredicted RBP13.54□□□□□ -0.24
SRSF4-208ENST00000634348 VPS37DQ86XT2 251 aa13.54□□□□□ -0.24
SRSF4-208ENST00000634348 HDAC5Q9UQL6 1122 aa13.54□□□□□ -0.24
SRSF4-208ENST00000634348 NFXL1Q6ZNB6 911 aa13.53□□□□□ -0.24
SRSF4-208ENST00000634348 DNAAF4Q8WXU2 420 aa13.53□□□□□ -0.24
SRSF4-208ENST00000634348 IQCEQ6IPM2 695 aa13.53□□□□□ -0.24
SRSF4-208ENST00000634348 C1orf141Q5JVX7 400 aa13.53□□□□□ -0.24
SRSF4-208ENST00000634348 SARNPP82979 210 aaKnown RBP13.53□□□□□ -0.24
SRSF4-208ENST00000634348 CBX1P83916 185 aa13.53□□□□□ -0.24
SRSF4-208ENST00000634348 CPLX2Q6PUV4 134 aaKnown RBP13.53□□□□□ -0.24
SRSF4-208ENST00000634348 PAF1Q8N7H5 531 aa13.53□□□□□ -0.24
SRSF4-208ENST00000634348 ZHX1Q9UKY1 873 aaPredicted RBP13.53□□□□□ -0.24
SRSF4-208ENST00000634348 TEFQ10587 303 aa13.53□□□□□ -0.24
SRSF4-208ENST00000634348 NFKBIBQ15653 356 aa13.53□□□□□ -0.24
SRSF4-208ENST00000634348 CCDC73Q6ZRK6 1079 aa13.53□□□□□ -0.24
SRSF4-208ENST00000634348 APAF1O14727 1248 aa13.53□□□□□ -0.24
SRSF4-208ENST00000634348 RNF214Q8ND24 703 aa13.53□□□□□ -0.24
SRSF4-208ENST00000634348 ARHGAP35Q9NRY4 1499 aa13.52□□□□□ -0.24
SRSF4-208ENST00000634348 CGNL1Q0VF96 1302 aa13.52□□□□□ -0.24
SRSF4-208ENST00000634348 SOGA1O94964 1423 aa13.52□□□□□ -0.24
SRSF4-208ENST00000634348 DDX23Q9BUQ8 820 aaKnown RBP13.52□□□□□ -0.25
SRSF4-208ENST00000634348 WASHC2CQ9Y4E1 1318 aa13.52□□□□□ -0.25
SRSF4-208ENST00000634348 CCDC181Q5TID7 509 aa13.52□□□□□ -0.25
SRSF4-208ENST00000634348 LUZP1Q86V48 1076 aa13.52□□□□□ -0.25
SRSF4-208ENST00000634348 CENPQQ7L2Z9 268 aaPredicted RBP13.51□□□□□ -0.25
SRSF4-208ENST00000634348 LNPKQ9C0E8 428 aa13.51□□□□□ -0.25
SRSF4-208ENST00000634348 EID1Q9Y6B2 187 aa13.51□□□□□ -0.25
SRSF4-208ENST00000634348 TRERF1Q96PN7 1200 aa13.51□□□□□ -0.25
SRSF4-208ENST00000634348 CARMIL1Q5VZK9 1371 aa13.51□□□□□ -0.25
SRSF4-208ENST00000634348 IFIT2P09913 472 aaKnown RBP13.5□□□□□ -0.25
SRSF4-208ENST00000634348 ZKSCAN2Q63HK3 967 aa13.5□□□□□ -0.25
SRSF4-208ENST00000634348 PAXIP1Q6ZW49 1069 aaPredicted RBP13.5□□□□□ -0.25
SRSF4-208ENST00000634348 FHAD1B1AJZ9 1412 aa13.5□□□□□ -0.25
SRSF4-208ENST00000634348 MINK1Q8N4C8 1332 aaPredicted RBP13.5□□□□□ -0.25
SRSF4-208ENST00000634348 VGFO15240 615 aaPredicted RBP13.5□□□□□ -0.25
SRSF4-208ENST00000634348 BMS1Q14692 1282 aaKnown RBP13.5□□□□□ -0.25
SRSF4-208ENST00000634348 MPNDQ8N594 471 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms