RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 ROCK1Q13464 1354 aa17.24■□□□□ 0.35
UBE3A-220ENST00000630424 UBTFL1P0CB47 393 aaPredicted RBP17.24■□□□□ 0.35
UBE3A-220ENST00000630424 ANKRD50Q9ULJ7 1429 aa17.23■□□□□ 0.35
UBE3A-220ENST00000630424 ERC2O15083 957 aa17.23■□□□□ 0.35
UBE3A-220ENST00000630424 TPM1P09493 284 aa17.23■□□□□ 0.35
UBE3A-220ENST00000630424 PIP4K2BP78356 416 aa17.23■□□□□ 0.35
UBE3A-220ENST00000630424 MTHFSP49914 203 aa17.23■□□□□ 0.35
UBE3A-220ENST00000630424 FAM161AQ3B820 660 aa17.23■□□□□ 0.35
UBE3A-220ENST00000630424 PLEKHO1Q53GL0 409 aaPredicted RBP17.23■□□□□ 0.35
UBE3A-220ENST00000630424 KRI1Q8N9T8 703 aaKnown RBP17.23■□□□□ 0.35
UBE3A-220ENST00000630424 IKQ13123 557 aaPredicted RBP17.22■□□□□ 0.35
UBE3A-220ENST00000630424 TOM1L2Q6ZVM7 507 aa17.22■□□□□ 0.35
UBE3A-220ENST00000630424 DDX54Q8TDD1 881 aaKnown RBP17.22■□□□□ 0.35
UBE3A-220ENST00000630424 PCMTD1Q96MG8 357 aaPredicted RBP17.22■□□□□ 0.35
UBE3A-220ENST00000630424 PRAM1Q96QH2 718 aa17.22■□□□□ 0.35
UBE3A-220ENST00000630424 SLC26A8Q96RN1 970 aa17.22■□□□□ 0.35
UBE3A-220ENST00000630424 LNPKQ9C0E8 428 aa17.21■□□□□ 0.35
UBE3A-220ENST00000630424 TATP17735 454 aaPredicted RBP17.2■□□□□ 0.34
UBE3A-220ENST00000630424 GOLGA6L1Q8N7Z2 621 aa17.2■□□□□ 0.34
UBE3A-220ENST00000630424 GAS2L2Q8NHY3 880 aa17.2■□□□□ 0.34
UBE3A-220ENST00000630424 SLC4A3P48751 1232 aa17.19■□□□□ 0.34
UBE3A-220ENST00000630424 VPS37CA5D8V6 355 aaPredicted RBP17.19■□□□□ 0.34
UBE3A-220ENST00000630424 PRDM11Q9NQV5 511 aa17.19■□□□□ 0.34
UBE3A-220ENST00000630424 SAFBQ15424 915 aaKnown RBP eCLIP17.19■□□□□ 0.34
UBE3A-220ENST00000630424 ANKLE2Q86XL3 938 aa17.18■□□□□ 0.34
UBE3A-220ENST00000630424 SMARCA4P51532 1647 aa17.18■□□□□ 0.34
UBE3A-220ENST00000630424 FOSBP53539 338 aa17.18■□□□□ 0.34
UBE3A-220ENST00000630424 KIF6Q6ZMV9 814 aa17.18■□□□□ 0.34
UBE3A-220ENST00000630424 CCAR1Q8IX12 1150 aaKnown RBP17.18■□□□□ 0.34
UBE3A-220ENST00000630424 BICD2Q8TD16 824 aa17.18■□□□□ 0.34
UBE3A-220ENST00000630424 RAPGEF3O95398 923 aa17.18■□□□□ 0.34
UBE3A-220ENST00000630424 PDE4AP27815 886 aa17.18■□□□□ 0.34
UBE3A-220ENST00000630424 IPO7O95373 1038 aaKnown RBP17.17■□□□□ 0.34
UBE3A-220ENST00000630424 CCAR2Q8N163 923 aaKnown RBP17.17■□□□□ 0.34
UBE3A-220ENST00000630424 DDX11L8A8MPP1 907 aa17.17■□□□□ 0.34
UBE3A-220ENST00000630424 ZBED9Q6R2W3 1325 aa17.17■□□□□ 0.34
UBE3A-220ENST00000630424 ANKRD20A12PQ8NF67 263 aa17.17■□□□□ 0.34
UBE3A-220ENST00000630424 PRG4Q92954 1404 aaPredicted RBP17.16■□□□□ 0.34
UBE3A-220ENST00000630424 CLASRPQ8N2M8 674 aaKnown RBP17.16■□□□□ 0.34
UBE3A-220ENST00000630424 PRKAR2BP31323 418 aa17.16■□□□□ 0.34
UBE3A-220ENST00000630424 R3HCC1Q9Y3T6 440 aaKnown RBP17.16■□□□□ 0.34
UBE3A-220ENST00000630424 TBC1D2BQ9UPU7 963 aa17.16■□□□□ 0.34
UBE3A-220ENST00000630424 SURF6O75683 361 aaKnown RBP17.15■□□□□ 0.34
UBE3A-220ENST00000630424 CCDC30Q5VVM6 783 aa17.15■□□□□ 0.34
UBE3A-220ENST00000630424 FGD6Q6ZV73 1430 aa17.15■□□□□ 0.34
UBE3A-220ENST00000630424 ARHGAP5Q13017 1502 aa17.15■□□□□ 0.34
UBE3A-220ENST00000630424 FSD1Q9BTV5 496 aa17.14■□□□□ 0.33
UBE3A-220ENST00000630424 SMC3Q9UQE7 1217 aa17.14■□□□□ 0.33
UBE3A-220ENST00000630424 INTS3Q68E01 1043 aaKnown RBP17.14■□□□□ 0.33
UBE3A-220ENST00000630424 TCP11L2Q8N4U5 519 aa17.14■□□□□ 0.33
UBE3A-220ENST00000630424 CABP4P57796 275 aa17.13■□□□□ 0.33
UBE3A-220ENST00000630424 KIF7Q2M1P5 1343 aa17.13■□□□□ 0.33
UBE3A-220ENST00000630424 GNAI3P08754 354 aa17.13■□□□□ 0.33
UBE3A-220ENST00000630424 SCAPERQ9BY12 1400 aa17.12■□□□□ 0.33
UBE3A-220ENST00000630424 ZNF530Q6P9A1 599 aaPredicted RBP17.12■□□□□ 0.33
UBE3A-220ENST00000630424 HOOK1Q9UJC3 728 aaKnown RBP17.12■□□□□ 0.33
UBE3A-220ENST00000630424 CNNM1Q9NRU3 951 aa17.12■□□□□ 0.33
UBE3A-220ENST00000630424 XPCQ01831 940 aaPredicted RBP17.12■□□□□ 0.33
UBE3A-220ENST00000630424 PANK1Q8TE04 598 aa17.12■□□□□ 0.33
UBE3A-220ENST00000630424 CABP1Q9NZU7 370 aa17.12■□□□□ 0.33
UBE3A-220ENST00000630424 SULT6B1Q6IMI4 303 aa17.11■□□□□ 0.33
UBE3A-220ENST00000630424 ZNF428Q96B54 188 aa17.11■□□□□ 0.33
UBE3A-220ENST00000630424 DNAJC2Q99543 621 aaKnown RBP17.11■□□□□ 0.33
UBE3A-220ENST00000630424 SLC12A5Q9H2X9 1139 aa17.11■□□□□ 0.33
UBE3A-220ENST00000630424 SYNJ2O15056 1496 aa17.1■□□□□ 0.33
UBE3A-220ENST00000630424 HDGFL1Q5TGJ6 251 aa17.1■□□□□ 0.33
UBE3A-220ENST00000630424 SLC52A1Q9NWF4 448 aa17.1■□□□□ 0.33
UBE3A-220ENST00000630424 SMG6Q86US8 1419 aaKnown RBP17.1■□□□□ 0.33
UBE3A-220ENST00000630424 KDM4AO75164 1064 aa17.1■□□□□ 0.33
UBE3A-220ENST00000630424 GRIN2BQ13224 1484 aa17.1■□□□□ 0.33
UBE3A-220ENST00000630424 ADAMTS8Q9UP79 889 aa17.1■□□□□ 0.33
UBE3A-220ENST00000630424 CDK19Q9BWU1 502 aa17.09■□□□□ 0.33
UBE3A-220ENST00000630424 PRDM2Q13029 1718 aa17.09■□□□□ 0.33
UBE3A-220ENST00000630424 SART3Q15020 963 aaKnown RBP17.09■□□□□ 0.33
UBE3A-220ENST00000630424 ZNF692Q9BU19 519 aaPredicted RBP17.08■□□□□ 0.33
UBE3A-220ENST00000630424 BRMS1Q9HCU9 246 aa17.08■□□□□ 0.33
UBE3A-220ENST00000630424 ATP2B1P20020 1258 aa17.08■□□□□ 0.32
UBE3A-220ENST00000630424 XBP1P17861 261 aa17.08■□□□□ 0.32
UBE3A-220ENST00000630424 FBXO3Q9UK99 471 aa17.08■□□□□ 0.32
UBE3A-220ENST00000630424 RRBP1Q9P2E9 1410 aaKnown RBP17.08■□□□□ 0.32
UBE3A-220ENST00000630424 ZC3H6P61129 1189 aaKnown RBP17.08■□□□□ 0.32
UBE3A-220ENST00000630424 ATP2B2Q01814 1243 aa17.08■□□□□ 0.32
UBE3A-220ENST00000630424 RRP12Q5JTH9 1297 aaKnown RBP17.08■□□□□ 0.32
UBE3A-220ENST00000630424 CCDC73Q6ZRK6 1079 aa17.07■□□□□ 0.32
UBE3A-220ENST00000630424 FYCO1Q9BQS8 1478 aa17.07■□□□□ 0.32
UBE3A-220ENST00000630424 SPG7Q9UQ90 795 aa17.07■□□□□ 0.32
UBE3A-220ENST00000630424 CCDC7Q96M83 1385 aa17.07■□□□□ 0.32
UBE3A-220ENST00000630424 TWISTNBQ3B726 338 aaPredicted RBP17.07■□□□□ 0.32
UBE3A-220ENST00000630424 NBPF1Q3BBV0 1214 aa17.07■□□□□ 0.32
UBE3A-220ENST00000630424 GNL3LQ9NVN8 582 aaKnown RBP17.07■□□□□ 0.32
UBE3A-220ENST00000630424 SKOR2Q2VWA4 1001 aaPredicted RBP17.06■□□□□ 0.32
UBE3A-220ENST00000630424 CT47A1Q5JQC4 288 aaPredicted RBP17.06■□□□□ 0.32
UBE3A-220ENST00000630424 CNTROBQ8N137 903 aa17.05■□□□□ 0.32
UBE3A-220ENST00000630424 EXOSC9Q06265 439 aaKnown RBP17.05■□□□□ 0.32
UBE3A-220ENST00000630424 CCDC70Q6NSX1 233 aa17.05■□□□□ 0.32
UBE3A-220ENST00000630424 TSHZ2Q9NRE2 1034 aa17.05■□□□□ 0.32
UBE3A-220ENST00000630424 MPHOSPH8Q99549 860 aa17.04■□□□□ 0.32
UBE3A-220ENST00000630424 SLC3A2P08195 630 aaKnown RBP17.04■□□□□ 0.32
UBE3A-220ENST00000630424 MYL6BP14649 208 aa17.04■□□□□ 0.32
UBE3A-220ENST00000630424 SLC4A2P04920 1241 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms