RNA–Protein interactions for RNA: ENST00000630016.1

CHD2-219, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-219ENST00000630016 VSIG10Q8N0Z9 540 aa9.19□□□□□ -0.94
CHD2-219ENST00000630016 AAASQ9NRG9 546 aa9.19□□□□□ -0.94
CHD2-219ENST00000630016 MINK1Q8N4C8 1332 aaPredicted RBP9.19□□□□□ -0.94
CHD2-219ENST00000630016 TOR4AQ9NXH8 423 aa9.18□□□□□ -0.94
CHD2-219ENST00000630016 MMP16P51512 607 aa9.17□□□□□ -0.94
CHD2-219ENST00000630016 CRIPAKQ8N1N5 446 aa9.17□□□□□ -0.94
CHD2-219ENST00000630016 USB1Q9BQ65 265 aaKnown RBP9.17□□□□□ -0.94
CHD2-219ENST00000630016 AVPP01185 164 aa9.16□□□□□ -0.94
CHD2-219ENST00000630016 CCDC102AQ96A19 550 aa9.16□□□□□ -0.94
CHD2-219ENST00000630016 TTC24A2A3L6 582 aaPredicted RBP9.15□□□□□ -0.94
CHD2-219ENST00000630016 POTECB2RU33 542 aa9.15□□□□□ -0.94
CHD2-219ENST00000630016 TRIM32Q13049 653 aa9.15□□□□□ -0.94
CHD2-219ENST00000630016 CTC1Q2NKJ3 1217 aa9.15□□□□□ -0.94
CHD2-219ENST00000630016 WNT7AO00755 349 aa9.14□□□□□ -0.95
CHD2-219ENST00000630016 AXIN1O15169 862 aa9.14□□□□□ -0.95
CHD2-219ENST00000630016 CLCN1P35523 988 aa9.14□□□□□ -0.95
CHD2-219ENST00000630016 GPCPD1Q9NPB8 672 aa9.14□□□□□ -0.95
CHD2-219ENST00000630016 HOXA2O43364 376 aa9.13□□□□□ -0.95
CHD2-219ENST00000630016 DXOO77932 396 aaKnown RBP9.13□□□□□ -0.95
CHD2-219ENST00000630016 KRI1Q8N9T8 703 aaKnown RBP9.12□□□□□ -0.95
CHD2-219ENST00000630016 REPIN1Q9BWE0 567 aaKnown RBP9.12□□□□□ -0.95
CHD2-219ENST00000630016 CCDC24Q8N4L8 307 aa9.11□□□□□ -0.95
CHD2-219ENST00000630016 SNIP1Q8TAD8 396 aaKnown RBP9.11□□□□□ -0.95
CHD2-219ENST00000630016 HLA-CQ95604 372 aa9.11□□□□□ -0.95
CHD2-219ENST00000630016 SMCPP49901 116 aaPredicted RBP9.1□□□□□ -0.95
CHD2-219ENST00000630016 NUTM1Q86Y26 1132 aa9.1□□□□□ -0.95
CHD2-219ENST00000630016 FAM217BQ9NTX9 383 aaPredicted RBP9.1□□□□□ -0.95
CHD2-219ENST00000630016 MRGPRX2Q96LB1 330 aa9.08□□□□□ -0.96
CHD2-219ENST00000630016 JUNDP17535 347 aa9.07□□□□□ -0.96
CHD2-219ENST00000630016 GUCA2AQ02747 115 aa9.07□□□□□ -0.96
CHD2-219ENST00000630016 GMPR2Q9P2T1 348 aaKnown RBP9.07□□□□□ -0.96
CHD2-219ENST00000630016 DACH1Q9UI36 760 aa9.07□□□□□ -0.96
CHD2-219ENST00000630016 C11orf95C9JLR9 678 aaPredicted RBP9.06□□□□□ -0.96
CHD2-219ENST00000630016 SMPD1P17405 629 aa9.06□□□□□ -0.96
CHD2-219ENST00000630016 WNT7BP56706 349 aa9.06□□□□□ -0.96
CHD2-219ENST00000630016 RETREG3Q86VR2 466 aa9.05□□□□□ -0.96
CHD2-219ENST00000630016 J3QL48 77 aa9.03□□□□□ -0.96
CHD2-219ENST00000630016 RC3H1Q5TC82 1133 aaKnown RBP9.03□□□□□ -0.96
CHD2-219ENST00000630016 TREML4Q6UXN2 200 aa9.03□□□□□ -0.96
CHD2-219ENST00000630016 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.03□□□□□ -0.96
CHD2-219ENST00000630016 SYMPKQ92797 1274 aaKnown RBP9.03□□□□□ -0.96
CHD2-219ENST00000630016 NUDT12Q9BQG2 462 aa9.03□□□□□ -0.96
CHD2-219ENST00000630016 FDX1P10109 184 aa9.02□□□□□ -0.97
CHD2-219ENST00000630016 C6orf229H3BNL8 230 aa9.01□□□□□ -0.97
CHD2-219ENST00000630016 SKOR1P84550 965 aa9.01□□□□□ -0.97
CHD2-219ENST00000630016 ATP13A2Q9NQ11 1180 aa9.01□□□□□ -0.97
CHD2-219ENST00000630016 TTLL12Q14166 644 aaPredicted RBP9□□□□□ -0.97
CHD2-219ENST00000630016 SENP2Q9HC62 589 aa9□□□□□ -0.97
CHD2-219ENST00000630016 SSTR3P32745 418 aaPredicted RBP8.99□□□□□ -0.97
CHD2-219ENST00000630016 WFS1O76024 890 aa8.98□□□□□ -0.97
CHD2-219ENST00000630016 MS4A1P11836 297 aa8.98□□□□□ -0.97
CHD2-219ENST00000630016 EHBP1Q8NDI1 1231 aa8.98□□□□□ -0.97
CHD2-219ENST00000630016 HPS1Q92902 700 aa8.98□□□□□ -0.97
CHD2-219ENST00000630016 ALDH1A1P00352 501 aa8.97□□□□□ -0.97
CHD2-219ENST00000630016 CCNYL3P0C7X3 344 aa8.97□□□□□ -0.97
CHD2-219ENST00000630016 LCE2AQ5TA79 106 aaPredicted RBP8.97□□□□□ -0.97
CHD2-219ENST00000630016 SPIRE2Q8WWL2 714 aa8.97□□□□□ -0.97
CHD2-219ENST00000630016 PCDHGC3Q9UN70 934 aa8.97□□□□□ -0.97
CHD2-219ENST00000630016 AMHR2Q16671 573 aa8.96□□□□□ -0.98
CHD2-219ENST00000630016 PTPRNQ16849 979 aa8.96□□□□□ -0.98
CHD2-219ENST00000630016 BARGINQ6ZT62 677 aa8.96□□□□□ -0.98
CHD2-219ENST00000630016 KIFC2Q96AC6 838 aa8.96□□□□□ -0.98
CHD2-219ENST00000630016 TRIM47Q96LD4 638 aa8.96□□□□□ -0.98
CHD2-219ENST00000630016 MOXD2PA6NHM9 499 aa8.94□□□□□ -0.98
CHD2-219ENST00000630016 PTCRAQ6ISU1 281 aaPredicted RBP8.94□□□□□ -0.98
CHD2-219ENST00000630016 GIGYF2Q6Y7W6 1299 aaKnown RBP8.94□□□□□ -0.98
CHD2-219ENST00000630016 WASF2Q9Y6W5 498 aa8.94□□□□□ -0.98
CHD2-219ENST00000630016 SPDYE5A6NIY4 337 aa8.93□□□□□ -0.98
CHD2-219ENST00000630016 ZMYND10O75800 440 aa8.93□□□□□ -0.98
CHD2-219ENST00000630016 NDUFV2P19404 249 aa8.93□□□□□ -0.98
CHD2-219ENST00000630016 MTMR2Q13614 643 aa8.93□□□□□ -0.98
CHD2-219ENST00000630016 SNRPBP14678 240 aaKnown RBP8.92□□□□□ -0.98
CHD2-219ENST00000630016 NFX1Q12986 1120 aaKnown RBP8.92□□□□□ -0.98
CHD2-219ENST00000630016 PRR7Q8TB68 274 aa8.92□□□□□ -0.98
CHD2-219ENST00000630016 UNC93B1Q9H1C4 597 aa8.92□□□□□ -0.98
CHD2-219ENST00000630016 SIAH2O43255 324 aa8.91□□□□□ -0.98
CHD2-219ENST00000630016 DIXDC1Q155Q3 683 aa8.91□□□□□ -0.98
CHD2-219ENST00000630016 DESI1Q6ICB0 168 aa8.91□□□□□ -0.98
CHD2-219ENST00000630016 ZC3H15Q8WU90 426 aaKnown RBP8.91□□□□□ -0.98
CHD2-219ENST00000630016 SH3BP2P78314 561 aa8.9□□□□□ -0.98
CHD2-219ENST00000630016 KCNH2Q12809 1159 aa8.9□□□□□ -0.98
CHD2-219ENST00000630016 LINC01559Q495D7 138 aa8.9□□□□□ -0.98
CHD2-219ENST00000630016 BEGAINQ9BUH8 593 aa8.9□□□□□ -0.98
CHD2-219ENST00000630016 EVA1BQ9NVM1 165 aa8.9□□□□□ -0.98
CHD2-219ENST00000630016 TERTO14746 1132 aaKnown RBP8.88□□□□□ -0.99
CHD2-219ENST00000630016 CAPN5O15484 640 aaPredicted RBP8.88□□□□□ -0.99
CHD2-219ENST00000630016 GJA5P36382 358 aa8.88□□□□□ -0.99
CHD2-219ENST00000630016 WIPF1O43516 503 aa8.87□□□□□ -0.99
CHD2-219ENST00000630016 INSM1Q01101 510 aaPredicted RBP8.87□□□□□ -0.99
CHD2-219ENST00000630016 ZNF511Q8NB15 262 aa8.87□□□□□ -0.99
CHD2-219ENST00000630016 BAP1Q92560 729 aa8.87□□□□□ -0.99
CHD2-219ENST00000630016 TBC1D2Q9BYX2 928 aa8.87□□□□□ -0.99
CHD2-219ENST00000630016 PLEKHG3A1L390 1219 aa8.86□□□□□ -0.99
CHD2-219ENST00000630016 BMP1P13497 986 aa8.86□□□□□ -0.99
CHD2-219ENST00000630016 VARSP26640 1264 aaKnown RBP8.86□□□□□ -0.99
CHD2-219ENST00000630016 RSBN1LQ6PCB5 846 aaPredicted RBP8.86□□□□□ -0.99
CHD2-219ENST00000630016 PARP9Q8IXQ6 854 aa8.86□□□□□ -0.99
CHD2-219ENST00000630016 TLL2Q9Y6L7 1015 aa8.86□□□□□ -0.99
CHD2-219ENST00000630016 CTHP32929 405 aa8.84□□□□□ -0.99
CHD2-219ENST00000630016 ZBTB3Q9H5J0 574 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 247.2 ms