RNA–Protein interactions for RNA: ENST00000629219.1

PKP4-218, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-218ENST00000629219 DLC1Q96QB1 1528 aa13.33□□□□□ -0.28
PKP4-218ENST00000629219 C1orf167Q5SNV9 1468 aa13.32□□□□□ -0.28
PKP4-218ENST00000629219 SPATA31A6Q5VVP1 1343 aa13.32□□□□□ -0.28
PKP4-218ENST00000629219 MEX3CQ5U5Q3 659 aaKnown RBP13.31□□□□□ -0.28
PKP4-218ENST00000629219 ADGRB1O14514 1584 aa13.31□□□□□ -0.28
PKP4-218ENST00000629219 DHX57Q6P158 1386 aaKnown RBP13.3□□□□□ -0.28
PKP4-218ENST00000629219 KIAA1210Q9ULL0 1709 aa13.3□□□□□ -0.28
PKP4-218ENST00000629219 NUTM2BA6NNL0 878 aaPredicted RBP13.29□□□□□ -0.28
PKP4-218ENST00000629219 NUTM2EB1AL46 878 aaPredicted RBP13.29□□□□□ -0.28
PKP4-218ENST00000629219 ZNF772Q68DY9 489 aaPredicted RBP13.29□□□□□ -0.28
PKP4-218ENST00000629219 NUTM2AQ8IVF1 878 aaPredicted RBP13.29□□□□□ -0.28
PKP4-218ENST00000629219 FMN2Q9NZ56 1722 aa13.29□□□□□ -0.28
PKP4-218ENST00000629219 ADGRB2O60241 1585 aa13.28□□□□□ -0.28
PKP4-218ENST00000629219 KIF1AQ12756 1690 aa13.27□□□□□ -0.29
PKP4-218ENST00000629219 RXRBP28702 533 aa13.26□□□□□ -0.29
PKP4-218ENST00000629219 SOS2Q07890 1332 aaPredicted RBP13.25□□□□□ -0.29
PKP4-218ENST00000629219 CFAP70Q5T0N1 1121 aa13.25□□□□□ -0.29
PKP4-218ENST00000629219 LRRC59Q96AG4 307 aaKnown RBP13.25□□□□□ -0.29
PKP4-218ENST00000629219 COL22A1Q8NFW1 1626 aaPredicted RBP13.24□□□□□ -0.29
PKP4-218ENST00000629219 TMEM132EQ6IEE7 984 aa13.24□□□□□ -0.29
PKP4-218ENST00000629219 AFF2P51816 1311 aa13.23□□□□□ -0.29
PKP4-218ENST00000629219 DDX17Q92841 729 aaKnown RBP13.23□□□□□ -0.29
PKP4-218ENST00000629219 ANKARQ7Z5J8 1434 aa13.22□□□□□ -0.29
PKP4-218ENST00000629219 PLEKHH1Q9ULM0 1364 aa13.22□□□□□ -0.29
PKP4-218ENST00000629219 NPHP3Q7Z494 1330 aa13.22□□□□□ -0.29
PKP4-218ENST00000629219 DCAF11Q8TEB1 546 aa13.22□□□□□ -0.29
PKP4-218ENST00000629219 STK26Q9P289 416 aa13.22□□□□□ -0.29
PKP4-218ENST00000629219 ARHGEF28Q8N1W1 1705 aaKnown RBP13.22□□□□□ -0.29
PKP4-218ENST00000629219 EIF3AQ14152 1382 aaKnown RBP13.21□□□□□ -0.29
PKP4-218ENST00000629219 PNPLA6Q8IY17 1366 aa13.21□□□□□ -0.29
PKP4-218ENST00000629219 WAPLQ7Z5K2 1190 aa13.21□□□□□ -0.29
PKP4-218ENST00000629219 PXDNQ92626 1479 aa13.21□□□□□ -0.3
PKP4-218ENST00000629219 ORAI2Q96SN7 254 aa13.19□□□□□ -0.3
PKP4-218ENST00000629219 CDK12Q9NYV4 1490 aaPredicted RBP13.18□□□□□ -0.3
PKP4-218ENST00000629219 C8orf37Q96NL8 207 aa13.18□□□□□ -0.3
PKP4-218ENST00000629219 PRAM1Q96QH2 718 aa13.18□□□□□ -0.3
PKP4-218ENST00000629219 QTRT2Q9H974 415 aaKnown RBP13.18□□□□□ -0.3
PKP4-218ENST00000629219 RGS12O14924 1447 aa13.18□□□□□ -0.3
PKP4-218ENST00000629219 RGPD8O14715 1765 aaPredicted RBP13.17□□□□□ -0.3
PKP4-218ENST00000629219 TULP4Q9NRJ4 1543 aa13.17□□□□□ -0.3
PKP4-218ENST00000629219 USP32Q8NFA0 1604 aa13.17□□□□□ -0.3
PKP4-218ENST00000629219 ESCO1Q5FWF5 840 aa13.16□□□□□ -0.3
PKP4-218ENST00000629219 KDM2AQ9Y2K7 1162 aa13.16□□□□□ -0.3
PKP4-218ENST00000629219 ITSN1Q15811 1721 aa13.16□□□□□ -0.3
PKP4-218ENST00000629219 MARF1Q9Y4F3 1742 aaKnown RBP13.16□□□□□ -0.3
PKP4-218ENST00000629219 POGKQ9P215 609 aa13.15□□□□□ -0.3
PKP4-218ENST00000629219 ADAMTS2O95450 1211 aa13.14□□□□□ -0.31
PKP4-218ENST00000629219 RBM6P78332 1123 aaKnown RBP13.14□□□□□ -0.31
PKP4-218ENST00000629219 EP400Q96L91 3159 aa13.13□□□□□ -0.31
PKP4-218ENST00000629219 SBNO1A3KN83 1393 aa13.13□□□□□ -0.31
PKP4-218ENST00000629219 TRPM1Q7Z4N2 1603 aa13.13□□□□□ -0.31
PKP4-218ENST00000629219 NGLY1Q96IV0 654 aa13.12□□□□□ -0.31
PKP4-218ENST00000629219 TRAK1Q9UPV9 953 aa13.12□□□□□ -0.31
PKP4-218ENST00000629219 FOXO3O43524 673 aa13.11□□□□□ -0.31
PKP4-218ENST00000629219 TRIM26Q12899 539 aaPredicted RBP13.11□□□□□ -0.31
PKP4-218ENST00000629219 PHF8Q9UPP1 1060 aa13.11□□□□□ -0.31
PKP4-218ENST00000629219 TNS3Q68CZ2 1445 aa13.11□□□□□ -0.31
PKP4-218ENST00000629219 SPATA31A3Q5VYP0 1347 aa13.11□□□□□ -0.31
PKP4-218ENST00000629219 TRPM3Q9HCF6 1732 aaPredicted RBP13.1□□□□□ -0.31
PKP4-218ENST00000629219 TOPAZ1Q8N9V7 1692 aa13.1□□□□□ -0.31
PKP4-218ENST00000629219 WASLO00401 505 aaPredicted RBP13.1□□□□□ -0.31
PKP4-218ENST00000629219 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.1□□□□□ -0.31
PKP4-218ENST00000629219 ATP7BP35670 1465 aa13.1□□□□□ -0.31
PKP4-218ENST00000629219 PSME1Q06323 249 aa13.09□□□□□ -0.31
PKP4-218ENST00000629219 ALS2Q96Q42 1657 aa13.08□□□□□ -0.31
PKP4-218ENST00000629219 ARHGEF10O15013 1369 aa13.08□□□□□ -0.31
PKP4-218ENST00000629219 ABCA3Q99758 1704 aa13.08□□□□□ -0.32
PKP4-218ENST00000629219 FNBP4Q8N3X1 1017 aaPredicted RBP13.08□□□□□ -0.32
PKP4-218ENST00000629219 L3MBTL2Q969R5 705 aa13.08□□□□□ -0.32
PKP4-218ENST00000629219 NUTM2FA1L443 756 aa13.07□□□□□ -0.32
PKP4-218ENST00000629219 SAFB2Q14151 953 aaKnown RBP eCLIP13.07□□□□□ -0.32
PKP4-218ENST00000629219 KRT28Q7Z3Y7 464 aa13.07□□□□□ -0.32
PKP4-218ENST00000629219 GPRASP1Q5JY77 1395 aa13.07□□□□□ -0.32
PKP4-218ENST00000629219 QRICH2Q9H0J4 1663 aa13.06□□□□□ -0.32
PKP4-218ENST00000629219 NWD2Q9ULI1 1742 aa13.06□□□□□ -0.32
PKP4-218ENST00000629219 USP21Q9UK80 565 aa13.06□□□□□ -0.32
PKP4-218ENST00000629219 MINK1Q8N4C8 1332 aaPredicted RBP13.06□□□□□ -0.32
PKP4-218ENST00000629219 PRR36Q9H6K5 1346 aa13.06□□□□□ -0.32
PKP4-218ENST00000629219 POLR3AO14802 1390 aaPredicted RBP13.05□□□□□ -0.32
PKP4-218ENST00000629219 ATRNO75882 1429 aa13.05□□□□□ -0.32
PKP4-218ENST00000629219 NBPF1Q3BBV0 1214 aa13.04□□□□□ -0.32
PKP4-218ENST00000629219 CENPJQ9HC77 1338 aaPredicted RBP13.04□□□□□ -0.32
PKP4-218ENST00000629219 CRYBG1Q9Y4K1 1723 aa13.04□□□□□ -0.32
PKP4-218ENST00000629219 ATAD2Q6PL18 1390 aa13.04□□□□□ -0.32
PKP4-218ENST00000629219 SLIT2O94813 1529 aa13.03□□□□□ -0.32
PKP4-218ENST00000629219 SIN3AQ96ST3 1273 aa13.03□□□□□ -0.32
PKP4-218ENST00000629219 HIRIP3Q9BW71 556 aaPredicted RBP13.03□□□□□ -0.32
PKP4-218ENST00000629219 TRPC5Q9UL62 973 aaPredicted RBP13.03□□□□□ -0.32
PKP4-218ENST00000629219 BRD4O60885 1362 aaPredicted RBP13.03□□□□□ -0.32
PKP4-218ENST00000629219 SBNO2Q9Y2G9 1366 aa13.03□□□□□ -0.32
PKP4-218ENST00000629219 XPCQ01831 940 aaPredicted RBP13.02□□□□□ -0.33
PKP4-218ENST00000629219 NUDT16Q96DE0 195 aaKnown RBP13.02□□□□□ -0.33
PKP4-218ENST00000629219 CCDC61Q9Y6R9 512 aa13.02□□□□□ -0.33
PKP4-218ENST00000629219 BCL9LQ86UU0 1499 aa13.02□□□□□ -0.33
PKP4-218ENST00000629219 RALGAPBQ86X10 1494 aa13.02□□□□□ -0.33
PKP4-218ENST00000629219 PLEKHG3A1L390 1219 aa13.01□□□□□ -0.33
PKP4-218ENST00000629219 CDK19Q9BWU1 502 aa13.01□□□□□ -0.33
PKP4-218ENST00000629219 ZRANB1Q9UGI0 708 aa13.01□□□□□ -0.33
PKP4-218ENST00000629219 ROCK2O75116 1388 aaKnown RBP13.01□□□□□ -0.33
PKP4-218ENST00000629219 PLCH1Q4KWH8 1693 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms