RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 PARD3Q8TEW0 1356 aa9.63□□□□□ -0.87
PKP4-217ENST00000628904 ZCCHC11Q5TAX3 1644 aaKnown RBP9.62□□□□□ -0.87
PKP4-217ENST00000628904 ATP10AO60312 1499 aa9.62□□□□□ -0.87
PKP4-217ENST00000628904 MAGI2Q86UL8 1455 aa9.62□□□□□ -0.87
PKP4-217ENST00000628904 NPATQ14207 1427 aa9.62□□□□□ -0.87
PKP4-217ENST00000628904 SLFN5Q08AF3 891 aa9.62□□□□□ -0.87
PKP4-217ENST00000628904 CDC42BPBQ9Y5S2 1711 aa9.62□□□□□ -0.87
PKP4-217ENST00000628904 UHRF1BP1Q6BDS2 1440 aa9.62□□□□□ -0.87
PKP4-217ENST00000628904 FYB1O15117 783 aa9.61□□□□□ -0.87
PKP4-217ENST00000628904 PRKCSHP14314 528 aaPredicted RBP9.61□□□□□ -0.87
PKP4-217ENST00000628904 HDGFP51858 240 aaKnown RBP9.61□□□□□ -0.87
PKP4-217ENST00000628904 MYH16Q9H6N6 1097 aa9.61□□□□□ -0.87
PKP4-217ENST00000628904 ATP7AQ04656 1500 aa9.61□□□□□ -0.87
PKP4-217ENST00000628904 NUDT16Q96DE0 195 aaKnown RBP9.61□□□□□ -0.87
PKP4-217ENST00000628904 ZNF518AQ6AHZ1 1483 aa9.6□□□□□ -0.87
PKP4-217ENST00000628904 SULT6B1Q6IMI4 303 aa9.6□□□□□ -0.87
PKP4-217ENST00000628904 NLRP6P59044 892 aa9.6□□□□□ -0.87
PKP4-217ENST00000628904 ERICH6BQ5W0A0 696 aa9.6□□□□□ -0.87
PKP4-217ENST00000628904 KCNA4P22459 653 aa9.59□□□□□ -0.87
PKP4-217ENST00000628904 USHBP1Q8N6Y0 703 aa9.59□□□□□ -0.87
PKP4-217ENST00000628904 MFAP1P55081 439 aaKnown RBP9.59□□□□□ -0.87
PKP4-217ENST00000628904 FOXD4L1Q9NU39 408 aa9.59□□□□□ -0.87
PKP4-217ENST00000628904 HSP90AA1P07900 732 aaKnown RBP9.58□□□□□ -0.88
PKP4-217ENST00000628904 KRT24Q2M2I5 525 aa9.58□□□□□ -0.88
PKP4-217ENST00000628904 MCM10Q7L590 875 aa9.58□□□□□ -0.88
PKP4-217ENST00000628904 AEBP1Q8IUX7 1158 aa9.58□□□□□ -0.88
PKP4-217ENST00000628904 UPF2Q9HAU5 1272 aaKnown RBP9.58□□□□□ -0.88
PKP4-217ENST00000628904 PREX2Q70Z35 1606 aa9.58□□□□□ -0.88
PKP4-217ENST00000628904 IGHDP01880 384 aa9.57□□□□□ -0.88
PKP4-217ENST00000628904 TMPOP42166 694 aaKnown RBP9.57□□□□□ -0.88
PKP4-217ENST00000628904 RTF1Q92541 710 aaKnown RBP9.57□□□□□ -0.88
PKP4-217ENST00000628904 STAC3Q96MF2 364 aa9.57□□□□□ -0.88
PKP4-217ENST00000628904 IPO9Q96P70 1041 aaKnown RBP9.57□□□□□ -0.88
PKP4-217ENST00000628904 LNPKQ9C0E8 428 aa9.57□□□□□ -0.88
PKP4-217ENST00000628904 NOB1Q9ULX3 412 aaKnown RBP9.57□□□□□ -0.88
PKP4-217ENST00000628904 COL17A1Q9UMD9 1497 aaPredicted RBP9.57□□□□□ -0.88
PKP4-217ENST00000628904 KDM5CP41229 1560 aa9.57□□□□□ -0.88
PKP4-217ENST00000628904 MYO5CQ9NQX4 1742 aa9.57□□□□□ -0.88
PKP4-217ENST00000628904 RLBP1P12271 317 aa9.57□□□□□ -0.88
PKP4-217ENST00000628904 HAP1P54257 671 aaPredicted RBP9.57□□□□□ -0.88
PKP4-217ENST00000628904 PHACTR3Q96KR7 559 aa9.57□□□□□ -0.88
PKP4-217ENST00000628904 RTEL1-TNFRSF6BF6WH68 1400 aa9.57□□□□□ -0.88
PKP4-217ENST00000628904 ADGBQ8N7X0 1667 aa9.57□□□□□ -0.88
PKP4-217ENST00000628904 EIF2S2P20042 333 aaKnown RBP9.56□□□□□ -0.88
PKP4-217ENST00000628904 ABCC1P33527 1531 aa9.56□□□□□ -0.88
PKP4-217ENST00000628904 ESCO1Q5FWF5 840 aa9.56□□□□□ -0.88
PKP4-217ENST00000628904 ABTB2Q8N961 1025 aa9.56□□□□□ -0.88
PKP4-217ENST00000628904 AMOTL2Q9Y2J4 779 aa9.56□□□□□ -0.88
PKP4-217ENST00000628904 HSP90AB2PQ58FF8 381 aa9.56□□□□□ -0.88
PKP4-217ENST00000628904 ZKSCAN2Q63HK3 967 aa9.56□□□□□ -0.88
PKP4-217ENST00000628904 MAST1Q9Y2H9 1570 aa9.56□□□□□ -0.88
PKP4-217ENST00000628904 DZIP1LQ8IYY4 767 aaKnown RBP9.56□□□□□ -0.88
PKP4-217ENST00000628904 NGEFQ8N5V2 710 aa9.56□□□□□ -0.88
PKP4-217ENST00000628904 CCDC61Q9Y6R9 512 aa9.56□□□□□ -0.88
PKP4-217ENST00000628904 ARHGEF5Q12774 1597 aa9.55□□□□□ -0.88
PKP4-217ENST00000628904 PRDM15P57071 1507 aaPredicted RBP9.55□□□□□ -0.88
PKP4-217ENST00000628904 SSH1Q8WYL5 1049 aa9.55□□□□□ -0.88
PKP4-217ENST00000628904 A0A1W2PP64 1363 aa9.55□□□□□ -0.88
PKP4-217ENST00000628904 ZNF330Q9Y3S2 320 aaPredicted RBP9.55□□□□□ -0.88
PKP4-217ENST00000628904 KDM5DQ9BY66 1539 aa9.55□□□□□ -0.88
PKP4-217ENST00000628904 ANKRD45Q5TZF3 282 aa9.55□□□□□ -0.88
PKP4-217ENST00000628904 ADCY10Q96PN6 1610 aa9.54□□□□□ -0.88
PKP4-217ENST00000628904 WASLO00401 505 aaPredicted RBP9.54□□□□□ -0.88
PKP4-217ENST00000628904 LRPPRCP42704 1394 aaKnown RBP9.54□□□□□ -0.88
PKP4-217ENST00000628904 TSPOAP1O95153 1857 aa9.54□□□□□ -0.88
PKP4-217ENST00000628904 RPGRIP1LQ68CZ1 1315 aa9.54□□□□□ -0.88
PKP4-217ENST00000628904 LTKP29376 864 aa9.54□□□□□ -0.88
PKP4-217ENST00000628904 RARSP54136 660 aaKnown RBP9.54□□□□□ -0.88
PKP4-217ENST00000628904 PSME1Q06323 249 aa9.54□□□□□ -0.88
PKP4-217ENST00000628904 CENPQQ7L2Z9 268 aaPredicted RBP9.54□□□□□ -0.88
PKP4-217ENST00000628904 GPRASP1Q5JY77 1395 aa9.54□□□□□ -0.88
PKP4-217ENST00000628904 POGZQ7Z3K3 1410 aa9.54□□□□□ -0.88
PKP4-217ENST00000628904 FOXO3O43524 673 aa9.54□□□□□ -0.88
PKP4-217ENST00000628904 CSB-PGBD3P0DP91 1061 aa9.53□□□□□ -0.88
PKP4-217ENST00000628904 TSPYL6Q8N831 410 aa9.53□□□□□ -0.88
PKP4-217ENST00000628904 POLKQ9UBT6 870 aa9.53□□□□□ -0.88
PKP4-217ENST00000628904 USP35Q9P2H5 1018 aa9.52□□□□□ -0.89
PKP4-217ENST00000628904 TAOK2Q9UL54 1235 aa9.52□□□□□ -0.89
PKP4-217ENST00000628904 DEKP35659 375 aaKnown RBP9.52□□□□□ -0.89
PKP4-217ENST00000628904 TMEM57Q8N5G2 664 aa9.52□□□□□ -0.89
PKP4-217ENST00000628904 RWDD1Q9H446 243 aaPredicted RBP9.52□□□□□ -0.89
PKP4-217ENST00000628904 PCDHB15Q9Y5E8 787 aa9.52□□□□□ -0.89
PKP4-217ENST00000628904 FANCIQ9NVI1 1328 aa9.52□□□□□ -0.89
PKP4-217ENST00000628904 PDZRN3Q9UPQ7 1066 aa9.52□□□□□ -0.89
PKP4-217ENST00000628904 CCDC9Q9Y3X0 531 aaKnown RBP9.52□□□□□ -0.89
PKP4-217ENST00000628904 ZFYVE16Q7Z3T8 1539 aa9.52□□□□□ -0.89
PKP4-217ENST00000628904 ZMYM3Q14202 1370 aa9.51□□□□□ -0.89
PKP4-217ENST00000628904 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.51□□□□□ -0.89
PKP4-217ENST00000628904 ACEP12821 1306 aa9.51□□□□□ -0.89
PKP4-217ENST00000628904 ZC3H6P61129 1189 aaKnown RBP9.51□□□□□ -0.89
PKP4-217ENST00000628904 GZF1Q9H116 711 aaPredicted RBP9.51□□□□□ -0.89
PKP4-217ENST00000628904 NOL8Q76FK4 1167 aaKnown RBP9.51□□□□□ -0.89
PKP4-217ENST00000628904 BACH2Q9BYV9 841 aa9.51□□□□□ -0.89
PKP4-217ENST00000628904 ASXL1Q8IXJ9 1541 aa9.5□□□□□ -0.89
PKP4-217ENST00000628904 FAM161AQ3B820 660 aa9.5□□□□□ -0.89
PKP4-217ENST00000628904 PNNQ9H307 717 aaKnown RBP9.5□□□□□ -0.89
PKP4-217ENST00000628904 UHRF1BP1LA0JNW5 1464 aa9.5□□□□□ -0.89
PKP4-217ENST00000628904 F6X3S4 739 aa9.5□□□□□ -0.89
PKP4-217ENST00000628904 IPO8O15397 1037 aaKnown RBP9.5□□□□□ -0.89
PKP4-217ENST00000628904 TRIM27P14373 513 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms