RNA–Protein interactions for RNA: ENST00000628867.1

SPTAN1-215, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-215ENST00000628867 SEPT12Q8IYM1 358 aa11.61□□□□□ -0.55
SPTAN1-215ENST00000628867 UNC13BO14795 1591 aa11.61□□□□□ -0.55
SPTAN1-215ENST00000628867 NUTM2FA1L443 756 aa11.6□□□□□ -0.55
SPTAN1-215ENST00000628867 PSDA5PKW4 1024 aaPredicted RBP11.6□□□□□ -0.55
SPTAN1-215ENST00000628867 LMOD2Q6P5Q4 547 aa11.59□□□□□ -0.55
SPTAN1-215ENST00000628867 KRT27Q7Z3Y8 459 aa11.59□□□□□ -0.55
SPTAN1-215ENST00000628867 E9PCH4 1651 aa11.59□□□□□ -0.55
SPTAN1-215ENST00000628867 BCL9LQ86UU0 1499 aa11.58□□□□□ -0.56
SPTAN1-215ENST00000628867 SRCAPQ6ZRS2 3230 aa11.58□□□□□ -0.56
SPTAN1-215ENST00000628867 XRN1Q8IZH2 1706 aaKnown RBP11.57□□□□□ -0.56
SPTAN1-215ENST00000628867 ROCK1Q13464 1354 aa11.57□□□□□ -0.56
SPTAN1-215ENST00000628867 DCAF8L1A6NGE4 600 aa11.57□□□□□ -0.56
SPTAN1-215ENST00000628867 PSME1Q06323 249 aa11.56□□□□□ -0.56
SPTAN1-215ENST00000628867 STK26Q9P289 416 aa11.56□□□□□ -0.56
SPTAN1-215ENST00000628867 ROBO2Q9HCK4 1378 aa11.55□□□□□ -0.56
SPTAN1-215ENST00000628867 HFM1A2PYH4 1435 aa11.55□□□□□ -0.56
SPTAN1-215ENST00000628867 HRCP23327 699 aa11.55□□□□□ -0.56
SPTAN1-215ENST00000628867 KRT28Q7Z3Y7 464 aa11.55□□□□□ -0.56
SPTAN1-215ENST00000628867 RPGRIP1LQ68CZ1 1315 aa11.55□□□□□ -0.56
SPTAN1-215ENST00000628867 VPS72Q15906 364 aa11.54□□□□□ -0.56
SPTAN1-215ENST00000628867 RALGAPBQ86X10 1494 aa11.53□□□□□ -0.56
SPTAN1-215ENST00000628867 IQGAP3Q86VI3 1631 aa11.53□□□□□ -0.56
SPTAN1-215ENST00000628867 NRXN3Q9Y4C0 1643 aa11.53□□□□□ -0.56
SPTAN1-215ENST00000628867 NALCNQ8IZF0 1738 aa11.52□□□□□ -0.56
SPTAN1-215ENST00000628867 MYOM2P54296 1465 aa11.52□□□□□ -0.56
SPTAN1-215ENST00000628867 EN1Q05925 392 aaPredicted RBP11.52□□□□□ -0.57
SPTAN1-215ENST00000628867 R3HDM1Q15032 1099 aaKnown RBP11.52□□□□□ -0.57
SPTAN1-215ENST00000628867 SPATA31A3Q5VYP0 1347 aa11.52□□□□□ -0.57
SPTAN1-215ENST00000628867 YY1P25490 414 aa11.51□□□□□ -0.57
SPTAN1-215ENST00000628867 WAPLQ7Z5K2 1190 aa11.51□□□□□ -0.57
SPTAN1-215ENST00000628867 CABLES1Q8TDN4 633 aa11.51□□□□□ -0.57
SPTAN1-215ENST00000628867 ONECUT3O60422 494 aaPredicted RBP11.5□□□□□ -0.57
SPTAN1-215ENST00000628867 FAM98CQ17RN3 349 aaKnown RBP11.5□□□□□ -0.57
SPTAN1-215ENST00000628867 LAMC1P11047 1609 aa11.49□□□□□ -0.57
SPTAN1-215ENST00000628867 COL22A1Q8NFW1 1626 aaPredicted RBP11.49□□□□□ -0.57
SPTAN1-215ENST00000628867 RGL3Q3MIN7 710 aa11.48□□□□□ -0.57
SPTAN1-215ENST00000628867 PPP1R1BQ9UD71 204 aaPredicted RBP11.48□□□□□ -0.57
SPTAN1-215ENST00000628867 PHF8Q9UPP1 1060 aa11.48□□□□□ -0.57
SPTAN1-215ENST00000628867 SLIT2O94813 1529 aa11.48□□□□□ -0.57
SPTAN1-215ENST00000628867 NEXMIFQ5QGS0 1516 aa11.47□□□□□ -0.57
SPTAN1-215ENST00000628867 PXDNQ92626 1479 aa11.47□□□□□ -0.57
SPTAN1-215ENST00000628867 CCDC144AA2RUR9 1427 aa11.47□□□□□ -0.57
SPTAN1-215ENST00000628867 NAIPQ13075 1403 aa11.47□□□□□ -0.57
SPTAN1-215ENST00000628867 SLC4A1APQ9BWU0 796 aaKnown RBP11.47□□□□□ -0.57
SPTAN1-215ENST00000628867 SPHKAPQ2M3C7 1700 aa11.46□□□□□ -0.57
SPTAN1-215ENST00000628867 FAM83GA6ND36 823 aa11.46□□□□□ -0.57
SPTAN1-215ENST00000628867 NBPF8Q3BBV2 869 aa11.46□□□□□ -0.57
SPTAN1-215ENST00000628867 NBPF14Q5TI25 921 aa11.46□□□□□ -0.57
SPTAN1-215ENST00000628867 TMEM132EQ6IEE7 984 aa11.46□□□□□ -0.57
SPTAN1-215ENST00000628867 BTG4Q9NY30 223 aa11.46□□□□□ -0.57
SPTAN1-215ENST00000628867 FAM182BQ5T319 152 aa11.45□□□□□ -0.58
SPTAN1-215ENST00000628867 PPARGC1BQ86YN6 1023 aaKnown RBP11.45□□□□□ -0.58
SPTAN1-215ENST00000628867 LRP5O75197 1615 aa11.45□□□□□ -0.58
SPTAN1-215ENST00000628867 GLI3P10071 1580 aa11.45□□□□□ -0.58
SPTAN1-215ENST00000628867 KIF1BO60333 1816 aa11.44□□□□□ -0.58
SPTAN1-215ENST00000628867 ARHGEF10O15013 1369 aa11.44□□□□□ -0.58
SPTAN1-215ENST00000628867 EZH2Q15910 746 aaKnown RBP11.44□□□□□ -0.58
SPTAN1-215ENST00000628867 MARF1Q9Y4F3 1742 aaKnown RBP11.43□□□□□ -0.58
SPTAN1-215ENST00000628867 APBA3O96018 575 aa11.43□□□□□ -0.58
SPTAN1-215ENST00000628867 FAM196AQ6ZSG2 479 aa11.43□□□□□ -0.58
SPTAN1-215ENST00000628867 CLTCL1P53675 1640 aa11.42□□□□□ -0.58
SPTAN1-215ENST00000628867 ADGRF5Q8IZF2 1346 aa11.42□□□□□ -0.58
SPTAN1-215ENST00000628867 TRIM37O94972 964 aa11.42□□□□□ -0.58
SPTAN1-215ENST00000628867 SAFB2Q14151 953 aaKnown RBP eCLIP11.42□□□□□ -0.58
SPTAN1-215ENST00000628867 PMFBP1Q8TBY8 1022 aa11.42□□□□□ -0.58
SPTAN1-215ENST00000628867 POGKQ9P215 609 aa11.42□□□□□ -0.58
SPTAN1-215ENST00000628867 TNS3Q68CZ2 1445 aa11.42□□□□□ -0.58
SPTAN1-215ENST00000628867 CDC42BPGQ6DT37 1551 aa11.41□□□□□ -0.58
SPTAN1-215ENST00000628867 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.41□□□□□ -0.58
SPTAN1-215ENST00000628867 PAK3O75914 559 aaPredicted RBP11.41□□□□□ -0.58
SPTAN1-215ENST00000628867 PDE3BQ13370 1112 aa11.41□□□□□ -0.58
SPTAN1-215ENST00000628867 SBNO1A3KN83 1393 aa11.41□□□□□ -0.58
SPTAN1-215ENST00000628867 ABCC11Q96J66 1382 aa11.41□□□□□ -0.58
SPTAN1-215ENST00000628867 EP400Q96L91 3159 aa11.4□□□□□ -0.58
SPTAN1-215ENST00000628867 EVA1CP58658 441 aa11.4□□□□□ -0.58
SPTAN1-215ENST00000628867 PRAG1Q86YV5 1406 aa11.4□□□□□ -0.58
SPTAN1-215ENST00000628867 GPRASP1Q5JY77 1395 aa11.4□□□□□ -0.59
SPTAN1-215ENST00000628867 BRWD3Q6RI45 1802 aa11.39□□□□□ -0.59
SPTAN1-215ENST00000628867 USP32Q8NFA0 1604 aa11.39□□□□□ -0.59
SPTAN1-215ENST00000628867 SIRT1Q96EB6 747 aa11.39□□□□□ -0.59
SPTAN1-215ENST00000628867 SPON1Q9HCB6 807 aa11.39□□□□□ -0.59
SPTAN1-215ENST00000628867 PRDM11Q9NQV5 511 aa11.39□□□□□ -0.59
SPTAN1-215ENST00000628867 ANKRD30BQ9BXX2 1392 aa11.39□□□□□ -0.59
SPTAN1-215ENST00000628867 PLEKHH1Q9ULM0 1364 aa11.39□□□□□ -0.59
SPTAN1-215ENST00000628867 NGDNQ8NEJ9 315 aaKnown RBP11.38□□□□□ -0.59
SPTAN1-215ENST00000628867 CAMKK2Q96RR4 588 aa11.38□□□□□ -0.59
SPTAN1-215ENST00000628867 STRN4Q9NRL3 753 aa11.38□□□□□ -0.59
SPTAN1-215ENST00000628867 USP35Q9P2H5 1018 aa11.38□□□□□ -0.59
SPTAN1-215ENST00000628867 DHX57Q6P158 1386 aaKnown RBP11.38□□□□□ -0.59
SPTAN1-215ENST00000628867 SPATA31A5Q5VU36 1347 aa11.37□□□□□ -0.59
SPTAN1-215ENST00000628867 SPATA31A7Q8IWB4 1347 aa11.37□□□□□ -0.59
SPTAN1-215ENST00000628867 PRAM1Q96QH2 718 aa11.36□□□□□ -0.59
SPTAN1-215ENST00000628867 KIF1AQ12756 1690 aa11.36□□□□□ -0.59
SPTAN1-215ENST00000628867 RRBP1Q9P2E9 1410 aaKnown RBP11.35□□□□□ -0.59
SPTAN1-215ENST00000628867 KCNQ2O43526 872 aa11.35□□□□□ -0.59
SPTAN1-215ENST00000628867 YTHDC2Q9H6S0 1430 aaKnown RBP11.35□□□□□ -0.59
SPTAN1-215ENST00000628867 PARD3Q8TEW0 1356 aa11.34□□□□□ -0.59
SPTAN1-215ENST00000628867 TECPR2O15040 1411 aa11.34□□□□□ -0.59
SPTAN1-215ENST00000628867 NWD2Q9ULI1 1742 aa11.33□□□□□ -0.6
SPTAN1-215ENST00000628867 C14orf93Q9H972 538 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms