RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 CCDC61Q9Y6R9 512 aa16.67■□□□□ 0.26
SYNGAP1-207ENST00000628646 DEPDC5O75140 1603 aa16.66■□□□□ 0.26
SYNGAP1-207ENST00000628646 FAM9BQ8IZU0 186 aa16.66■□□□□ 0.26
SYNGAP1-207ENST00000628646 METP08581 1390 aa16.66■□□□□ 0.26
SYNGAP1-207ENST00000628646 FOXO3O43524 673 aa16.65■□□□□ 0.26
SYNGAP1-207ENST00000628646 C19orf44Q9H6X5 657 aa16.65■□□□□ 0.26
SYNGAP1-207ENST00000628646 GPRASP1Q5JY77 1395 aa16.65■□□□□ 0.26
SYNGAP1-207ENST00000628646 PREX1Q8TCU6 1659 aa16.65■□□□□ 0.26
SYNGAP1-207ENST00000628646 VWDEQ8N2E2 1590 aa16.65■□□□□ 0.26
SYNGAP1-207ENST00000628646 HNRNPUQ00839 825 aaKnown RBP eCLIP16.65■□□□□ 0.26
SYNGAP1-207ENST00000628646 ADGRB3O60242 1522 aa16.64■□□□□ 0.26
SYNGAP1-207ENST00000628646 CFAP53Q96M91 514 aa16.64■□□□□ 0.25
SYNGAP1-207ENST00000628646 LMTK3Q96Q04 1460 aa16.64■□□□□ 0.25
SYNGAP1-207ENST00000628646 LRPPRCP42704 1394 aaKnown RBP16.64■□□□□ 0.25
SYNGAP1-207ENST00000628646 WDR43Q15061 677 aaKnown RBP eCLIP16.64■□□□□ 0.259e-6■■■□□ 15.6
SYNGAP1-207ENST00000628646 TOM1O60784 492 aa16.63■□□□□ 0.25
SYNGAP1-207ENST00000628646 A0A0G2JS52 829 aa16.63■□□□□ 0.25
SYNGAP1-207ENST00000628646 PIK3C2BO00750 1634 aa16.62■□□□□ 0.25
SYNGAP1-207ENST00000628646 MYT1Q01538 1121 aa16.62■□□□□ 0.25
SYNGAP1-207ENST00000628646 SPATA31D1Q6ZQQ2 1576 aa16.62■□□□□ 0.25
SYNGAP1-207ENST00000628646 COG3Q96JB2 828 aa16.62■□□□□ 0.25
SYNGAP1-207ENST00000628646 PHF8Q9UPP1 1060 aa16.62■□□□□ 0.25
SYNGAP1-207ENST00000628646 CEP170BQ9Y4F5 1589 aaPredicted RBP16.61■□□□□ 0.25
SYNGAP1-207ENST00000628646 NLRP6P59044 892 aa16.61■□□□□ 0.25
SYNGAP1-207ENST00000628646 ABTB2Q8N961 1025 aa16.61■□□□□ 0.25
SYNGAP1-207ENST00000628646 CGNL1Q0VF96 1302 aa16.61■□□□□ 0.25
SYNGAP1-207ENST00000628646 SYNMO15061 1565 aa16.61■□□□□ 0.25
SYNGAP1-207ENST00000628646 ATAD2Q6PL18 1390 aa16.6■□□□□ 0.25
SYNGAP1-207ENST00000628646 GGNBP2Q9H3C7 697 aa16.6■□□□□ 0.25
SYNGAP1-207ENST00000628646 SALL2Q9Y467 1007 aaPredicted RBP16.6■□□□□ 0.25
SYNGAP1-207ENST00000628646 KTN1Q86UP2 1357 aaKnown RBP16.59■□□□□ 0.25
SYNGAP1-207ENST00000628646 CSB-PGBD3P0DP91 1061 aa16.59■□□□□ 0.25
SYNGAP1-207ENST00000628646 U2SURPO15042 1029 aaKnown RBP16.59■□□□□ 0.25
SYNGAP1-207ENST00000628646 ZBED9Q6R2W3 1325 aa16.58■□□□□ 0.25
SYNGAP1-207ENST00000628646 TMEM94Q12767 1356 aa16.58■□□□□ 0.25
SYNGAP1-207ENST00000628646 CCDC9Q9Y3X0 531 aaKnown RBP16.58■□□□□ 0.24
SYNGAP1-207ENST00000628646 AMPHP49418 695 aa16.58■□□□□ 0.24
SYNGAP1-207ENST00000628646 LTV1Q96GA3 475 aaPredicted RBP16.58■□□□□ 0.24
SYNGAP1-207ENST00000628646 PIK3C2GO75747 1445 aa16.57■□□□□ 0.24
SYNGAP1-207ENST00000628646 ABCC11Q96J66 1382 aa16.57■□□□□ 0.24
SYNGAP1-207ENST00000628646 C3P01024 1663 aa16.57■□□□□ 0.24
SYNGAP1-207ENST00000628646 PLEKHH1Q9ULM0 1364 aa16.56■□□□□ 0.24
SYNGAP1-207ENST00000628646 SENP3-EIF4A1A0A087X0R7 540 aa16.56■□□□□ 0.24
SYNGAP1-207ENST00000628646 ZNF692Q9BU19 519 aaPredicted RBP16.56■□□□□ 0.24
SYNGAP1-207ENST00000628646 MYOM2P54296 1465 aa16.56■□□□□ 0.24
SYNGAP1-207ENST00000628646 NUTM2BA6NNL0 878 aaPredicted RBP16.56■□□□□ 0.24
SYNGAP1-207ENST00000628646 NUTM2EB1AL46 878 aaPredicted RBP16.56■□□□□ 0.24
SYNGAP1-207ENST00000628646 NUTM2AQ8IVF1 878 aaPredicted RBP16.56■□□□□ 0.24
SYNGAP1-207ENST00000628646 MEX3CQ5U5Q3 659 aaKnown RBP16.55■□□□□ 0.24
SYNGAP1-207ENST00000628646 NUDCQ9Y266 331 aa16.55■□□□□ 0.24
SYNGAP1-207ENST00000628646 ZFYVE9O95405 1425 aa16.54■□□□□ 0.24
SYNGAP1-207ENST00000628646 DISP3Q9P2K9 1392 aa16.53■□□□□ 0.24
SYNGAP1-207ENST00000628646 IQGAP1P46940 1657 aa16.53■□□□□ 0.24
SYNGAP1-207ENST00000628646 ROBO2Q9HCK4 1378 aa16.53■□□□□ 0.24
SYNGAP1-207ENST00000628646 ORAI2Q96SN7 254 aa16.52■□□□□ 0.24
SYNGAP1-207ENST00000628646 KRT28Q7Z3Y7 464 aa16.52■□□□□ 0.24
SYNGAP1-207ENST00000628646 TESK2Q96S53 571 aa16.52■□□□□ 0.23
SYNGAP1-207ENST00000628646 ACEP12821 1306 aa16.52■□□□□ 0.23
SYNGAP1-207ENST00000628646 SLAIN2Q9P270 581 aa16.51■□□□□ 0.23
SYNGAP1-207ENST00000628646 PIK3R4Q99570 1358 aa16.5■□□□□ 0.23
SYNGAP1-207ENST00000628646 NLRP13Q86W25 1043 aa16.5■□□□□ 0.23
SYNGAP1-207ENST00000628646 ADAMTSL3P82987 1691 aa16.5■□□□□ 0.23
SYNGAP1-207ENST00000628646 SIGLEC1Q9BZZ2 1709 aa16.49■□□□□ 0.23
SYNGAP1-207ENST00000628646 EVA1CP58658 441 aa16.49■□□□□ 0.23
SYNGAP1-207ENST00000628646 PNISRQ8TF01 805 aaKnown RBP16.49■□□□□ 0.23
SYNGAP1-207ENST00000628646 RALBP1Q15311 655 aa16.49■□□□□ 0.23
SYNGAP1-207ENST00000628646 NEURL4Q96JN8 1562 aa16.48■□□□□ 0.23
SYNGAP1-207ENST00000628646 PER1O15534 1290 aaPredicted RBP16.48■□□□□ 0.23
SYNGAP1-207ENST00000628646 NEXMIFQ5QGS0 1516 aa16.48■□□□□ 0.23
SYNGAP1-207ENST00000628646 SIRT1Q96EB6 747 aa16.48■□□□□ 0.23
SYNGAP1-207ENST00000628646 MROH2AA6NES4 1674 aa16.48■□□□□ 0.23
SYNGAP1-207ENST00000628646 ALKQ9UM73 1620 aa16.47■□□□□ 0.23
SYNGAP1-207ENST00000628646 NEUROD2Q15784 382 aa16.47■□□□□ 0.23
SYNGAP1-207ENST00000628646 NPHP3Q7Z494 1330 aa16.47■□□□□ 0.23
SYNGAP1-207ENST00000628646 SMG6Q86US8 1419 aaKnown RBP16.47■□□□□ 0.23
SYNGAP1-207ENST00000628646 TMEM131LA2VDJ0 1609 aa16.47■□□□□ 0.23
SYNGAP1-207ENST00000628646 DDX17Q92841 729 aaKnown RBP16.47■□□□□ 0.23
SYNGAP1-207ENST00000628646 PARD3Q8TEW0 1356 aa16.46■□□□□ 0.23
SYNGAP1-207ENST00000628646 ZC3H6P61129 1189 aaKnown RBP16.46■□□□□ 0.23
SYNGAP1-207ENST00000628646 NME9Q86XW9 330 aa16.46■□□□□ 0.23
SYNGAP1-207ENST00000628646 PPIP5K1Q6PFW1 1433 aa16.46■□□□□ 0.23
SYNGAP1-207ENST00000628646 MYO3AQ8NEV4 1616 aa16.46■□□□□ 0.22
SYNGAP1-207ENST00000628646 U2AF1L5P0DN76 240 aaPredicted RBP16.45■□□□□ 0.22
SYNGAP1-207ENST00000628646 U2AF1Q01081 240 aaKnown RBP eCLIP16.45■□□□□ 0.22
SYNGAP1-207ENST00000628646 ADAMTS13Q76LX8 1427 aa16.45■□□□□ 0.22
SYNGAP1-207ENST00000628646 IFT172Q9UG01 1749 aa16.45■□□□□ 0.22
SYNGAP1-207ENST00000628646 RNF123Q5XPI4 1314 aa16.44■□□□□ 0.22
SYNGAP1-207ENST00000628646 NSD3Q9BZ95 1437 aa16.44■□□□□ 0.22
SYNGAP1-207ENST00000628646 ADAMTS2O95450 1211 aa16.44■□□□□ 0.22
SYNGAP1-207ENST00000628646 MAPK8IP3Q9UPT6 1336 aa16.44■□□□□ 0.22
SYNGAP1-207ENST00000628646 PRDM11Q9NQV5 511 aa16.44■□□□□ 0.22
SYNGAP1-207ENST00000628646 IRX6P78412 446 aaPredicted RBP16.43■□□□□ 0.22
SYNGAP1-207ENST00000628646 KIAA1210Q9ULL0 1709 aa16.43■□□□□ 0.22
SYNGAP1-207ENST00000628646 BRD4O60885 1362 aaPredicted RBP16.42■□□□□ 0.22
SYNGAP1-207ENST00000628646 MYOM1P52179 1685 aa16.42■□□□□ 0.22
SYNGAP1-207ENST00000628646 ERICH6BQ5W0A0 696 aa16.42■□□□□ 0.22
SYNGAP1-207ENST00000628646 USP35Q9P2H5 1018 aa16.41■□□□□ 0.22
SYNGAP1-207ENST00000628646 STRN4Q9NRL3 753 aa16.41■□□□□ 0.22
SYNGAP1-207ENST00000628646 MYBBP1AQ9BQG0 1328 aaKnown RBP16.4■□□□□ 0.22
SYNGAP1-207ENST00000628646 RRS1Q15050 365 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms