RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 SETD1BQ9UPS6 1966 aaKnown RBP11.86□□□□□ -0.51
TCF4-260ENST00000627685 TET3O43151 1660 aa11.85□□□□□ -0.51
TCF4-260ENST00000627685 ARHGAP23Q9P227 1491 aa11.85□□□□□ -0.51
TCF4-260ENST00000627685 CHGAP10645 457 aaKnown RBP11.85□□□□□ -0.51
TCF4-260ENST00000627685 DPY19L2Q6NUT2 758 aa11.85□□□□□ -0.51
TCF4-260ENST00000627685 ILDR1Q86SU0 546 aaPredicted RBP11.85□□□□□ -0.51
TCF4-260ENST00000627685 WASHC2CQ9Y4E1 1318 aa11.85□□□□□ -0.51
TCF4-260ENST00000627685 GCC2Q8IWJ2 1684 aa11.84□□□□□ -0.51
TCF4-260ENST00000627685 FAM50AQ14320 339 aaKnown RBP11.84□□□□□ -0.51
TCF4-260ENST00000627685 PHF8Q9UPP1 1060 aa11.84□□□□□ -0.51
TCF4-260ENST00000627685 PIK3C2BO00750 1634 aa11.84□□□□□ -0.51
TCF4-260ENST00000627685 UGGT1Q9NYU2 1555 aa11.84□□□□□ -0.51
TCF4-260ENST00000627685 MED14O60244 1454 aa11.83□□□□□ -0.52
TCF4-260ENST00000627685 POLR1AO95602 1720 aaPredicted RBP11.83□□□□□ -0.52
TCF4-260ENST00000627685 SLIT1O75093 1534 aa11.83□□□□□ -0.52
TCF4-260ENST00000627685 E9PCH4 1651 aa11.83□□□□□ -0.52
TCF4-260ENST00000627685 NAIPQ13075 1403 aa11.83□□□□□ -0.52
TCF4-260ENST00000627685 KDM5AP29375 1690 aaKnown RBP11.82□□□□□ -0.52
TCF4-260ENST00000627685 L3MBTL3Q96JM7 780 aaPredicted RBP11.82□□□□□ -0.52
TCF4-260ENST00000627685 RPRD2Q5VT52 1461 aaKnown RBP11.82□□□□□ -0.52
TCF4-260ENST00000627685 HS6ST3Q8IZP7 471 aa11.81□□□□□ -0.52
TCF4-260ENST00000627685 ADGRB3O60242 1522 aa11.8□□□□□ -0.52
TCF4-260ENST00000627685 G3V3G9 751 aa11.79□□□□□ -0.52
TCF4-260ENST00000627685 NLRP6P59044 892 aa11.79□□□□□ -0.52
TCF4-260ENST00000627685 NCKAP5LQ9HCH0 1330 aa11.79□□□□□ -0.52
TCF4-260ENST00000627685 HFM1A2PYH4 1435 aa11.78□□□□□ -0.52
TCF4-260ENST00000627685 FBXO41Q8TF61 875 aa11.78□□□□□ -0.52
TCF4-260ENST00000627685 ALKQ9UM73 1620 aa11.78□□□□□ -0.52
TCF4-260ENST00000627685 MFRPQ9BY79 579 aa11.77□□□□□ -0.53
TCF4-260ENST00000627685 TMEM131LA2VDJ0 1609 aa11.77□□□□□ -0.53
TCF4-260ENST00000627685 STRCP1A6NGW2 1772 aa11.77□□□□□ -0.53
TCF4-260ENST00000627685 MS4A4AQ96JQ5 239 aa11.76□□□□□ -0.53
TCF4-260ENST00000627685 ZFYVE9O95405 1425 aa11.76□□□□□ -0.53
TCF4-260ENST00000627685 IQGAP1P46940 1657 aa11.75□□□□□ -0.53
TCF4-260ENST00000627685 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.75□□□□□ -0.53
TCF4-260ENST00000627685 BOLA1Q9Y3E2 137 aa11.75□□□□□ -0.53
TCF4-260ENST00000627685 SCAF11Q99590 1463 aaKnown RBP11.75□□□□□ -0.53
TCF4-260ENST00000627685 C3orf67Q6ZVT6 689 aa11.74□□□□□ -0.53
TCF4-260ENST00000627685 FBXO22Q8NEZ5 403 aa11.74□□□□□ -0.53
TCF4-260ENST00000627685 ZNF335Q9H4Z2 1342 aaPredicted RBP11.74□□□□□ -0.53
TCF4-260ENST00000627685 KANK1Q14678 1352 aa11.74□□□□□ -0.53
TCF4-260ENST00000627685 IQSEC2Q5JU85 1478 aa11.74□□□□□ -0.53
TCF4-260ENST00000627685 NPHP4O75161 1426 aaPredicted RBP11.73□□□□□ -0.53
TCF4-260ENST00000627685 SLAIN1Q8ND83 568 aa11.73□□□□□ -0.53
TCF4-260ENST00000627685 TMEM2Q9UHN6 1383 aa11.72□□□□□ -0.53
TCF4-260ENST00000627685 LTKP29376 864 aa11.72□□□□□ -0.53
TCF4-260ENST00000627685 IDI1Q13907 227 aa11.72□□□□□ -0.53
TCF4-260ENST00000627685 CERKQ8TCT0 537 aa11.72□□□□□ -0.53
TCF4-260ENST00000627685 CLTCL1P53675 1640 aa11.71□□□□□ -0.54
TCF4-260ENST00000627685 TRPM2O94759 1503 aa11.7□□□□□ -0.54
TCF4-260ENST00000627685 SPHKAPQ2M3C7 1700 aa11.7□□□□□ -0.54
TCF4-260ENST00000627685 ITGAEP38570 1179 aa11.7□□□□□ -0.54
TCF4-260ENST00000627685 NWD1Q149M9 1564 aa11.7□□□□□ -0.54
TCF4-260ENST00000627685 NUP155O75694 1391 aa11.69□□□□□ -0.54
TCF4-260ENST00000627685 MYO5BQ9ULV0 1848 aa11.69□□□□□ -0.54
TCF4-260ENST00000627685 NRXN3Q9Y4C0 1643 aa11.68□□□□□ -0.54
TCF4-260ENST00000627685 THEMISQ8N1K5 641 aaPredicted RBP11.68□□□□□ -0.54
TCF4-260ENST00000627685 CPS1P31327 1500 aa11.68□□□□□ -0.54
TCF4-260ENST00000627685 LRRC7Q96NW7 1537 aa11.66□□□□□ -0.54
TCF4-260ENST00000627685 NKX1-1Q15270 411 aaPredicted RBP11.66□□□□□ -0.54
TCF4-260ENST00000627685 MICALL2Q8IY33 904 aa11.66□□□□□ -0.54
TCF4-260ENST00000627685 TMEM121BQ9BXQ6 578 aaPredicted RBP11.66□□□□□ -0.54
TCF4-260ENST00000627685 XIRP1Q702N8 1843 aaKnown RBP11.65□□□□□ -0.54
TCF4-260ENST00000627685 CFAP65Q6ZU64 1925 aaKnown RBP11.65□□□□□ -0.54
TCF4-260ENST00000627685 ADAMTS13Q76LX8 1427 aa11.65□□□□□ -0.54
TCF4-260ENST00000627685 NEXMIFQ5QGS0 1516 aa11.65□□□□□ -0.55
TCF4-260ENST00000627685 ANKLE2Q86XL3 938 aa11.64□□□□□ -0.55
TCF4-260ENST00000627685 RIMS2Q9UQ26 1411 aa11.63□□□□□ -0.55
TCF4-260ENST00000627685 SLC52A1Q9NWF4 448 aa11.63□□□□□ -0.55
TCF4-260ENST00000627685 PPP1R37O75864 691 aa11.62□□□□□ -0.55
TCF4-260ENST00000627685 SETD1AO15047 1707 aaKnown RBP11.62□□□□□ -0.55
TCF4-260ENST00000627685 PLEKHG1Q9ULL1 1385 aa11.62□□□□□ -0.55
TCF4-260ENST00000627685 SETBP1Q9Y6X0 1596 aa11.62□□□□□ -0.55
TCF4-260ENST00000627685 XRN1Q8IZH2 1706 aaKnown RBP11.6□□□□□ -0.55
TCF4-260ENST00000627685 DIP2AQ14689 1571 aa11.59□□□□□ -0.55
TCF4-260ENST00000627685 TXNDC2Q86VQ3 553 aa11.59□□□□□ -0.55
TCF4-260ENST00000627685 FAM163AQ96GL9 167 aaPredicted RBP11.59□□□□□ -0.55
TCF4-260ENST00000627685 SPATA31E1Q6ZUB1 1445 aa11.59□□□□□ -0.55
TCF4-260ENST00000627685 PTPRUQ92729 1446 aa11.59□□□□□ -0.55
TCF4-260ENST00000627685 NKTRP30414 1462 aaKnown RBP11.58□□□□□ -0.56
TCF4-260ENST00000627685 RYDENQ9NUL5 291 aaKnown RBP11.57□□□□□ -0.56
TCF4-260ENST00000627685 IFT172Q9UG01 1749 aa11.57□□□□□ -0.56
TCF4-260ENST00000627685 RAB3GAP2Q9H2M9 1393 aa11.56□□□□□ -0.56
TCF4-260ENST00000627685 ASXL1Q8IXJ9 1541 aa11.56□□□□□ -0.56
TCF4-260ENST00000627685 SETD5Q9C0A6 1442 aa11.56□□□□□ -0.56
TCF4-260ENST00000627685 PRAG1Q86YV5 1406 aa11.55□□□□□ -0.56
TCF4-260ENST00000627685 CHD2O14647 1828 aaKnown RBP11.55□□□□□ -0.56
TCF4-260ENST00000627685 PPLO60437 1756 aa11.54□□□□□ -0.56
TCF4-260ENST00000627685 GTPBP6O43824 516 aaPredicted RBP11.53□□□□□ -0.56
TCF4-260ENST00000627685 TMEM92Q6UXU6 159 aa11.53□□□□□ -0.56
TCF4-260ENST00000627685 SLC26A8Q96RN1 970 aa11.53□□□□□ -0.56
TCF4-260ENST00000627685 SNPHO15079 494 aa11.52□□□□□ -0.57
TCF4-260ENST00000627685 BBXQ8WY36 941 aaPredicted RBP11.52□□□□□ -0.57
TCF4-260ENST00000627685 TMEM94Q12767 1356 aa11.52□□□□□ -0.57
TCF4-260ENST00000627685 EID1Q9Y6B2 187 aa11.51□□□□□ -0.57
TCF4-260ENST00000627685 METP08581 1390 aa11.51□□□□□ -0.57
TCF4-260ENST00000627685 NRXN1Q9ULB1 1477 aa11.51□□□□□ -0.57
TCF4-260ENST00000627685 MPHOSPH9Q99550 1183 aa11.5□□□□□ -0.57
TCF4-260ENST00000627685 PIK3R4Q99570 1358 aa11.5□□□□□ -0.57
TCF4-260ENST00000627685 KIF1BO60333 1816 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms