RNA–Protein interactions for RNA: ENST00000627200.1

CHD2-210, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 230 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-210ENST00000627200 LRPPRCP42704 1394 aaKnown RBP13.98□□□□□ -0.17
CHD2-210ENST00000627200 WAPLQ7Z5K2 1190 aa13.98□□□□□ -0.17
CHD2-210ENST00000627200 LRRC59Q96AG4 307 aaKnown RBP13.97□□□□□ -0.17
CHD2-210ENST00000627200 NRXN1Q9ULB1 1477 aa13.97□□□□□ -0.17
CHD2-210ENST00000627200 AFF2P51816 1311 aa13.96□□□□□ -0.17
CHD2-210ENST00000627200 MYOM2P54296 1465 aa13.96□□□□□ -0.17
CHD2-210ENST00000627200 NUTM2FA1L443 756 aa13.96□□□□□ -0.17
CHD2-210ENST00000627200 ZNF772Q68DY9 489 aaPredicted RBP13.96□□□□□ -0.17
CHD2-210ENST00000627200 YTHDC2Q9H6S0 1430 aaKnown RBP13.96□□□□□ -0.18
CHD2-210ENST00000627200 SOS2Q07890 1332 aaPredicted RBP13.95□□□□□ -0.18
CHD2-210ENST00000627200 C8orf37Q96NL8 207 aa13.95□□□□□ -0.18
CHD2-210ENST00000627200 FMN2Q9NZ56 1722 aa13.95□□□□□ -0.18
CHD2-210ENST00000627200 ABCC11Q96J66 1382 aa13.95□□□□□ -0.18
CHD2-210ENST00000627200 PXDNQ92626 1479 aa13.94□□□□□ -0.18
CHD2-210ENST00000627200 XPCQ01831 940 aaPredicted RBP13.94□□□□□ -0.18
CHD2-210ENST00000627200 ADAMTS2O95450 1211 aa13.93□□□□□ -0.18
CHD2-210ENST00000627200 ESCO1Q5FWF5 840 aa13.93□□□□□ -0.18
CHD2-210ENST00000627200 CFAP70Q5T0N1 1121 aa13.93□□□□□ -0.18
CHD2-210ENST00000627200 COL22A1Q8NFW1 1626 aaPredicted RBP13.93□□□□□ -0.18
CHD2-210ENST00000627200 C14orf93Q9H972 538 aaKnown RBP13.91□□□□□ -0.18
CHD2-210ENST00000627200 FOXO3O43524 673 aa13.9□□□□□ -0.18
CHD2-210ENST00000627200 RXRBP28702 533 aa13.9□□□□□ -0.18
CHD2-210ENST00000627200 ADGRB1O14514 1584 aa13.9□□□□□ -0.18
CHD2-210ENST00000627200 RGS12O14924 1447 aa13.9□□□□□ -0.19
CHD2-210ENST00000627200 NPHP3Q7Z494 1330 aa13.9□□□□□ -0.19
CHD2-210ENST00000627200 RGPD8O14715 1765 aaPredicted RBP13.89□□□□□ -0.19
CHD2-210ENST00000627200 SAFB2Q14151 953 aaKnown RBP eCLIP13.89□□□□□ -0.19
CHD2-210ENST00000627200 ACIN1Q9UKV3 1341 aaKnown RBP13.89□□□□□ -0.19
CHD2-210ENST00000627200 KIF1AQ12756 1690 aa13.88□□□□□ -0.19
CHD2-210ENST00000627200 CDK12Q9NYV4 1490 aaPredicted RBP13.88□□□□□ -0.19
CHD2-210ENST00000627200 DHX57Q6P158 1386 aaKnown RBP13.87□□□□□ -0.19
CHD2-210ENST00000627200 NGLY1Q96IV0 654 aa13.87□□□□□ -0.19
CHD2-210ENST00000627200 PRAM1Q96QH2 718 aa13.87□□□□□ -0.19
CHD2-210ENST00000627200 USP32Q8NFA0 1604 aa13.86□□□□□ -0.19
CHD2-210ENST00000627200 QTRT2Q9H974 415 aaKnown RBP13.86□□□□□ -0.19
CHD2-210ENST00000627200 MARF1Q9Y4F3 1742 aaKnown RBP13.86□□□□□ -0.19
CHD2-210ENST00000627200 DLC1Q96QB1 1528 aa13.85□□□□□ -0.19
CHD2-210ENST00000627200 UPF1Q92900 1129 aaKnown RBP eCLIP13.85□□□□□ -0.19
CHD2-210ENST00000627200 KDM2AQ9Y2K7 1162 aa13.85□□□□□ -0.19
CHD2-210ENST00000627200 ADGRB2O60241 1585 aa13.84□□□□□ -0.19
CHD2-210ENST00000627200 SIRT1Q96EB6 747 aa13.84□□□□□ -0.19
CHD2-210ENST00000627200 RBM6P78332 1123 aaKnown RBP13.83□□□□□ -0.2
CHD2-210ENST00000627200 DCAF11Q8TEB1 546 aa13.83□□□□□ -0.2
CHD2-210ENST00000627200 USP21Q9UK80 565 aa13.83□□□□□ -0.2
CHD2-210ENST00000627200 ATRNO75882 1429 aa13.82□□□□□ -0.2
CHD2-210ENST00000627200 HIRIP3Q9BW71 556 aaPredicted RBP13.82□□□□□ -0.2
CHD2-210ENST00000627200 TRAK1Q9UPV9 953 aa13.82□□□□□ -0.2
CHD2-210ENST00000627200 SPATA31A3Q5VYP0 1347 aa13.82□□□□□ -0.2
CHD2-210ENST00000627200 BCL9LQ86UU0 1499 aa13.81□□□□□ -0.2
CHD2-210ENST00000627200 FNBP4Q8N3X1 1017 aaPredicted RBP13.81□□□□□ -0.2
CHD2-210ENST00000627200 POGKQ9P215 609 aa13.81□□□□□ -0.2
CHD2-210ENST00000627200 PHF8Q9UPP1 1060 aa13.81□□□□□ -0.2
CHD2-210ENST00000627200 ABCA3Q99758 1704 aa13.81□□□□□ -0.2
CHD2-210ENST00000627200 TNS3Q68CZ2 1445 aa13.81□□□□□ -0.2
CHD2-210ENST00000627200 PLEKHG5O94827 1062 aa13.8□□□□□ -0.2
CHD2-210ENST00000627200 KRT28Q7Z3Y7 464 aa13.8□□□□□ -0.2
CHD2-210ENST00000627200 ARHGEF28Q8N1W1 1705 aaKnown RBP13.8□□□□□ -0.2
CHD2-210ENST00000627200 MINK1Q8N4C8 1332 aaPredicted RBP13.8□□□□□ -0.2
CHD2-210ENST00000627200 TRPC5Q9UL62 973 aaPredicted RBP13.79□□□□□ -0.2
CHD2-210ENST00000627200 ANKARQ7Z5J8 1434 aa13.79□□□□□ -0.2
CHD2-210ENST00000627200 HRCP23327 699 aa13.78□□□□□ -0.2
CHD2-210ENST00000627200 PMFBP1Q8TBY8 1022 aa13.78□□□□□ -0.2
CHD2-210ENST00000627200 CABLES1Q8TDN4 633 aa13.78□□□□□ -0.2
CHD2-210ENST00000627200 PRR36Q9H6K5 1346 aa13.78□□□□□ -0.2
CHD2-210ENST00000627200 TULP4Q9NRJ4 1543 aa13.78□□□□□ -0.2
CHD2-210ENST00000627200 TRPM3Q9HCF6 1732 aaPredicted RBP13.78□□□□□ -0.2
CHD2-210ENST00000627200 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.77□□□□□ -0.21
CHD2-210ENST00000627200 PLCH1Q4KWH8 1693 aa13.76□□□□□ -0.21
CHD2-210ENST00000627200 GLI3P10071 1580 aa13.76□□□□□ -0.21
CHD2-210ENST00000627200 SLIT2O94813 1529 aa13.76□□□□□ -0.21
CHD2-210ENST00000627200 SBNO1A3KN83 1393 aa13.75□□□□□ -0.21
CHD2-210ENST00000627200 LMOD2Q6P5Q4 547 aa13.75□□□□□ -0.21
CHD2-210ENST00000627200 PSME1Q06323 249 aa13.74□□□□□ -0.21
CHD2-210ENST00000627200 ALS2Q96Q42 1657 aa13.74□□□□□ -0.21
CHD2-210ENST00000627200 ATP7BP35670 1465 aa13.74□□□□□ -0.21
CHD2-210ENST00000627200 RALGAPBQ86X10 1494 aa13.74□□□□□ -0.21
CHD2-210ENST00000627200 WASLO00401 505 aaPredicted RBP13.73□□□□□ -0.21
CHD2-210ENST00000627200 HAP1P54257 671 aaPredicted RBP13.73□□□□□ -0.21
CHD2-210ENST00000627200 ARHGEF10O15013 1369 aa13.72□□□□□ -0.21
CHD2-210ENST00000627200 ATAD2Q6PL18 1390 aa13.72□□□□□ -0.21
CHD2-210ENST00000627200 GJD4Q96KN9 370 aaPredicted RBP13.72□□□□□ -0.21
CHD2-210ENST00000627200 KIAA1210Q9ULL0 1709 aa13.71□□□□□ -0.21
CHD2-210ENST00000627200 CRYBG1Q9Y4K1 1723 aa13.71□□□□□ -0.21
CHD2-210ENST00000627200 UNC5CLQ8IV45 518 aa13.71□□□□□ -0.21
CHD2-210ENST00000627200 EP400Q96L91 3159 aa13.71□□□□□ -0.21
CHD2-210ENST00000627200 EIF3AQ14152 1382 aaKnown RBP13.71□□□□□ -0.22
CHD2-210ENST00000627200 ITSN1Q15811 1721 aa13.7□□□□□ -0.22
CHD2-210ENST00000627200 NWD2Q9ULI1 1742 aa13.7□□□□□ -0.22
CHD2-210ENST00000627200 TOPAZ1Q8N9V7 1692 aa13.7□□□□□ -0.22
CHD2-210ENST00000627200 NRAPQ86VF7 1730 aa13.7□□□□□ -0.22
CHD2-210ENST00000627200 NBPF1Q3BBV0 1214 aa13.69□□□□□ -0.22
CHD2-210ENST00000627200 STAC3Q96MF2 364 aa13.69□□□□□ -0.22
CHD2-210ENST00000627200 GPRASP1Q5JY77 1395 aa13.69□□□□□ -0.22
CHD2-210ENST00000627200 BRWD3Q6RI45 1802 aa13.69□□□□□ -0.22
CHD2-210ENST00000627200 FAM83GA6ND36 823 aa13.67□□□□□ -0.22
CHD2-210ENST00000627200 NGDNQ8NEJ9 315 aaKnown RBP13.67□□□□□ -0.22
CHD2-210ENST00000627200 PAK3O75914 559 aaPredicted RBP13.66□□□□□ -0.22
CHD2-210ENST00000627200 NUDT16Q96DE0 195 aaKnown RBP13.66□□□□□ -0.22
CHD2-210ENST00000627200 COL14A1Q05707 1796 aaKnown RBP13.66□□□□□ -0.22
CHD2-210ENST00000627200 PHRF1Q9P1Y6 1649 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms