RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 CANXP27824 592 aaKnown RBP14.59□□□□□ -0.07
VARS2-213ENST00000625423 NUTM2DQ5VT03 806 aaPredicted RBP14.58□□□□□ -0.08
VARS2-213ENST00000625423 USP35Q9P2H5 1018 aa14.58□□□□□ -0.08
VARS2-213ENST00000625423 PDE3AQ14432 1141 aa14.57□□□□□ -0.08
VARS2-213ENST00000625423 PANK1Q8TE04 598 aa14.57□□□□□ -0.08
VARS2-213ENST00000625423 RUNDC1Q96C34 613 aa14.57□□□□□ -0.08
VARS2-213ENST00000625423 CFAP65Q6ZU64 1925 aaKnown RBP14.57□□□□□ -0.08
VARS2-213ENST00000625423 ADGRB1O14514 1584 aa14.57□□□□□ -0.08
VARS2-213ENST00000625423 TCP11L2Q8N4U5 519 aa14.57□□□□□ -0.08
VARS2-213ENST00000625423 COG6Q9Y2V7 657 aa14.57□□□□□ -0.08
VARS2-213ENST00000625423 MTHFSP49914 203 aa14.57□□□□□ -0.08
VARS2-213ENST00000625423 CGNL1Q0VF96 1302 aa14.57□□□□□ -0.08
VARS2-213ENST00000625423 FRMPD1Q5SYB0 1578 aa14.57□□□□□ -0.08
VARS2-213ENST00000625423 CD109Q6YHK3 1445 aa14.56□□□□□ -0.08
VARS2-213ENST00000625423 POGZQ7Z3K3 1410 aa14.56□□□□□ -0.08
VARS2-213ENST00000625423 SENP3Q9H4L4 574 aaPredicted RBP14.56□□□□□ -0.08
VARS2-213ENST00000625423 FRAT1Q92837 279 aaPredicted RBP14.56□□□□□ -0.08
VARS2-213ENST00000625423 QRICH2Q9H0J4 1663 aa14.56□□□□□ -0.08
VARS2-213ENST00000625423 RPGRIP1LQ68CZ1 1315 aa14.56□□□□□ -0.08
VARS2-213ENST00000625423 DAXXQ9UER7 740 aaPredicted RBP14.55□□□□□ -0.08
VARS2-213ENST00000625423 PPLO60437 1756 aa14.55□□□□□ -0.08
VARS2-213ENST00000625423 CLUAP1Q96AJ1 413 aa14.55□□□□□ -0.08
VARS2-213ENST00000625423 SHPRHQ149N8 1683 aa14.54□□□□□ -0.08
VARS2-213ENST00000625423 MLH3Q9UHC1 1453 aa14.54□□□□□ -0.08
VARS2-213ENST00000625423 RARSP54136 660 aaKnown RBP14.53□□□□□ -0.08
VARS2-213ENST00000625423 NINLQ9Y2I6 1382 aa14.53□□□□□ -0.08
VARS2-213ENST00000625423 ZC3H13Q5T200 1668 aaKnown RBP14.53□□□□□ -0.08
VARS2-213ENST00000625423 CFAP53Q96M91 514 aa14.53□□□□□ -0.08
VARS2-213ENST00000625423 PHF23Q9BUL5 403 aaPredicted RBP14.53□□□□□ -0.08
VARS2-213ENST00000625423 EVC2Q86UK5 1308 aa14.52□□□□□ -0.08
VARS2-213ENST00000625423 ABCC3O15438 1527 aa14.52□□□□□ -0.08
VARS2-213ENST00000625423 IQSEC2Q5JU85 1478 aa14.52□□□□□ -0.08
VARS2-213ENST00000625423 RAPGEF3O95398 923 aa14.51□□□□□ -0.09
VARS2-213ENST00000625423 SAFB2Q14151 953 aaKnown RBP eCLIP14.51□□□□□ -0.09
VARS2-213ENST00000625423 WDR63Q8IWG1 891 aa14.51□□□□□ -0.09
VARS2-213ENST00000625423 CABP2Q9NPB3 220 aa14.51□□□□□ -0.09
VARS2-213ENST00000625423 VGFO15240 615 aaPredicted RBP14.51□□□□□ -0.09
VARS2-213ENST00000625423 BCL2L13Q9BXK5 485 aa14.51□□□□□ -0.09
VARS2-213ENST00000625423 HECW2Q9P2P5 1572 aa14.51□□□□□ -0.09
VARS2-213ENST00000625423 TNNQ9UQP3 1299 aa14.51□□□□□ -0.09
VARS2-213ENST00000625423 ANKRD36BQ8N2N9 1353 aa14.5□□□□□ -0.09
VARS2-213ENST00000625423 U2AF1L5P0DN76 240 aaPredicted RBP14.5□□□□□ -0.09
VARS2-213ENST00000625423 U2AF1Q01081 240 aaKnown RBP eCLIP14.5□□□□□ -0.09
VARS2-213ENST00000625423 NFKBIBQ15653 356 aa14.5□□□□□ -0.09
VARS2-213ENST00000625423 GLI2P10070 1586 aa14.49□□□□□ -0.09
VARS2-213ENST00000625423 RLBP1P12271 317 aa14.49□□□□□ -0.09
VARS2-213ENST00000625423 TULP4Q9NRJ4 1543 aa14.48□□□□□ -0.09
VARS2-213ENST00000625423 FAM69CQ0P6D2 419 aa14.48□□□□□ -0.09
VARS2-213ENST00000625423 CCDC27Q2M243 656 aa14.48□□□□□ -0.09
VARS2-213ENST00000625423 PUS7Q96PZ0 661 aaKnown RBP14.48□□□□□ -0.09
VARS2-213ENST00000625423 CFAP74Q9C0B2 1584 aa14.48□□□□□ -0.09
VARS2-213ENST00000625423 USP32Q8NFA0 1604 aa14.48□□□□□ -0.09
VARS2-213ENST00000625423 IDI1Q13907 227 aa14.47□□□□□ -0.09
VARS2-213ENST00000625423 STK26Q9P289 416 aa14.47□□□□□ -0.09
VARS2-213ENST00000625423 MAPK8IP3Q9UPT6 1336 aa14.47□□□□□ -0.09
VARS2-213ENST00000625423 SIGLEC1Q9BZZ2 1709 aa14.47□□□□□ -0.09
VARS2-213ENST00000625423 PCDHB15Q9Y5E8 787 aa14.47□□□□□ -0.09
VARS2-213ENST00000625423 CAMSAP1Q5T5Y3 1602 aa14.46□□□□□ -0.09
VARS2-213ENST00000625423 NSD2O96028 1365 aa14.46□□□□□ -0.09
VARS2-213ENST00000625423 NEXMIFQ5QGS0 1516 aa14.46□□□□□ -0.09
VARS2-213ENST00000625423 SEC24BO95487 1268 aa14.46□□□□□ -0.1
VARS2-213ENST00000625423 PMFBP1Q8TBY8 1022 aa14.45□□□□□ -0.1
VARS2-213ENST00000625423 MYH16Q9H6N6 1097 aa14.45□□□□□ -0.1
VARS2-213ENST00000625423 USP19O94966 1318 aa14.45□□□□□ -0.1
VARS2-213ENST00000625423 SRPK2P78362 688 aaKnown RBP14.45□□□□□ -0.1
VARS2-213ENST00000625423 ARHGEF28Q8N1W1 1705 aaKnown RBP14.44□□□□□ -0.1
VARS2-213ENST00000625423 GGNBP2Q9H3C7 697 aa14.44□□□□□ -0.1
VARS2-213ENST00000625423 A0A1W2PP64 1363 aa14.44□□□□□ -0.1
VARS2-213ENST00000625423 PIK3C2BO00750 1634 aa14.43□□□□□ -0.1
VARS2-213ENST00000625423 U2SURPO15042 1029 aaKnown RBP14.43□□□□□ -0.1
VARS2-213ENST00000625423 AAMPQ13685 434 aa14.43□□□□□ -0.1
VARS2-213ENST00000625423 TSR2Q969E8 191 aaKnown RBP14.43□□□□□ -0.1
VARS2-213ENST00000625423 MLECQ14165 292 aa14.42□□□□□ -0.1
VARS2-213ENST00000625423 NCBP3Q53F19 620 aaKnown RBP14.42□□□□□ -0.1
VARS2-213ENST00000625423 PDZRN3Q9UPQ7 1066 aa14.41□□□□□ -0.1
VARS2-213ENST00000625423 ABCC11Q96J66 1382 aa14.41□□□□□ -0.1
VARS2-213ENST00000625423 GSE1Q14687 1217 aa14.41□□□□□ -0.1
VARS2-213ENST00000625423 MINK1Q8N4C8 1332 aaPredicted RBP14.41□□□□□ -0.1
VARS2-213ENST00000625423 DIP2CQ9Y2E4 1556 aa14.4□□□□□ -0.1
VARS2-213ENST00000625423 NEO1Q92859 1461 aa14.4□□□□□ -0.1
VARS2-213ENST00000625423 PLPPR3Q6T4P5 718 aa14.4□□□□□ -0.1
VARS2-213ENST00000625423 PLEKHF1Q96S99 279 aa14.4□□□□□ -0.1
VARS2-213ENST00000625423 RWDD1Q9H446 243 aaPredicted RBP14.4□□□□□ -0.1
VARS2-213ENST00000625423 SLC52A1Q9NWF4 448 aa14.4□□□□□ -0.1
VARS2-213ENST00000625423 ARHGAP31Q2M1Z3 1444 aa14.4□□□□□ -0.1
VARS2-213ENST00000625423 MVPQ14764 893 aaKnown RBP14.4□□□□□ -0.1
VARS2-213ENST00000625423 ZKSCAN2Q63HK3 967 aa14.4□□□□□ -0.1
VARS2-213ENST00000625423 FRAT2O75474 233 aaPredicted RBP14.39□□□□□ -0.11
VARS2-213ENST00000625423 FTSJ3Q8IY81 847 aaKnown RBP14.39□□□□□ -0.11
VARS2-213ENST00000625423 IL27Q8NEV9 243 aa14.39□□□□□ -0.11
VARS2-213ENST00000625423 TMPOP42166 694 aaKnown RBP14.39□□□□□ -0.11
VARS2-213ENST00000625423 EXOSC9Q06265 439 aaKnown RBP14.39□□□□□ -0.11
VARS2-213ENST00000625423 PRAM1Q96QH2 718 aa14.39□□□□□ -0.11
VARS2-213ENST00000625423 FYB1O15117 783 aa14.39□□□□□ -0.11
VARS2-213ENST00000625423 ADGRB2O60241 1585 aa14.39□□□□□ -0.11
VARS2-213ENST00000625423 DZIP1LQ8IYY4 767 aaKnown RBP14.39□□□□□ -0.11
VARS2-213ENST00000625423 ZFYVE9O95405 1425 aa14.38□□□□□ -0.11
VARS2-213ENST00000625423 POGKQ9P215 609 aa14.38□□□□□ -0.11
VARS2-213ENST00000625423 TRIM35Q9UPQ4 493 aa14.38□□□□□ -0.11
VARS2-213ENST00000625423 SMC4Q9NTJ3 1288 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms