RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.08□□□□□ -1.28
CDKL5-208ENST00000624953 ADH1BP00325 375 aa7.07□□□□□ -1.28
CDKL5-208ENST00000624953 GRIPAP1Q4V328 841 aa7.07□□□□□ -1.28
CDKL5-208ENST00000624953 MSS51Q4VC12 460 aa7.07□□□□□ -1.28
CDKL5-208ENST00000624953 RNF19BQ6ZMZ0 732 aa7.07□□□□□ -1.28
CDKL5-208ENST00000624953 FAM160A2Q8N612 972 aaPredicted RBP7.07□□□□□ -1.28
CDKL5-208ENST00000624953 TLL1O43897 1013 aa7.06□□□□□ -1.28
CDKL5-208ENST00000624953 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.06□□□□□ -1.28
CDKL5-208ENST00000624953 FDX1P10109 184 aa7.05□□□□□ -1.28
CDKL5-208ENST00000624953 NDUFV2P19404 249 aa7.05□□□□□ -1.28
CDKL5-208ENST00000624953 GUCA2AQ02747 115 aa7.05□□□□□ -1.28
CDKL5-208ENST00000624953 LAPTM4AQ15012 233 aa7.05□□□□□ -1.28
CDKL5-208ENST00000624953 NUTM1Q86Y26 1132 aa7.05□□□□□ -1.28
CDKL5-208ENST00000624953 LIMD1Q9UGP4 676 aa7.05□□□□□ -1.28
CDKL5-208ENST00000624953 NRG2O14511 850 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-208ENST00000624953 MMP16P51512 607 aa7.04□□□□□ -1.28
CDKL5-208ENST00000624953 NEUROD2Q15784 382 aa7.04□□□□□ -1.28
CDKL5-208ENST00000624953 Q3C1V9 767 aa7.04□□□□□ -1.28
CDKL5-208ENST00000624953 PRPF38BQ5VTL8 546 aaKnown RBP7.04□□□□□ -1.28
CDKL5-208ENST00000624953 LILRB3O75022 631 aa7.03□□□□□ -1.28
CDKL5-208ENST00000624953 FMNL1O95466 1100 aaPredicted RBP7.03□□□□□ -1.28
CDKL5-208ENST00000624953 SKIV2LQ15477 1246 aaKnown RBP7.03□□□□□ -1.28
CDKL5-208ENST00000624953 FBXO31Q5XUX0 539 aaPredicted RBP7.03□□□□□ -1.28
CDKL5-208ENST00000624953 EMID1Q96A84 441 aaPredicted RBP7.03□□□□□ -1.28
CDKL5-208ENST00000624953 SPSB2Q99619 263 aa7.03□□□□□ -1.28
CDKL5-208ENST00000624953 RSPH6AQ9H0K4 717 aa7.03□□□□□ -1.28
CDKL5-208ENST00000624953 PCDHB15Q9Y5E8 787 aa7.03□□□□□ -1.28
CDKL5-208ENST00000624953 V9GY48 417 aaPredicted RBP7.03□□□□□ -1.28
CDKL5-208ENST00000624953 DXOO77932 396 aaKnown RBP7.02□□□□□ -1.29
CDKL5-208ENST00000624953 PPP2R2DQ66LE6 453 aa7.02□□□□□ -1.29
CDKL5-208ENST00000624953 RIC3Q7Z5B4 369 aa7.02□□□□□ -1.29
CDKL5-208ENST00000624953 RETREG3Q86VR2 466 aa7.02□□□□□ -1.29
CDKL5-208ENST00000624953 DESI1Q6ICB0 168 aa7.01□□□□□ -1.29
CDKL5-208ENST00000624953 PDZRN3Q9UPQ7 1066 aa7.01□□□□□ -1.29
CDKL5-208ENST00000624953 CLK2P49760 499 aaKnown RBP7□□□□□ -1.29
CDKL5-208ENST00000624953 USB1Q9BQ65 265 aaKnown RBP7□□□□□ -1.29
CDKL5-208ENST00000624953 SPDYE5A6NIY4 337 aa6.99□□□□□ -1.29
CDKL5-208ENST00000624953 RNF223E7ERA6 249 aa6.99□□□□□ -1.29
CDKL5-208ENST00000624953 PPEF1O14829 653 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-208ENST00000624953 S1PR4O95977 384 aa6.99□□□□□ -1.29
CDKL5-208ENST00000624953 HRCP23327 699 aa6.99□□□□□ -1.29
CDKL5-208ENST00000624953 QPCTQ16769 361 aa6.99□□□□□ -1.29
CDKL5-208ENST00000624953 TRIM67Q6ZTA4 783 aa6.99□□□□□ -1.29
CDKL5-208ENST00000624953 PRDM9Q9NQV7 894 aa6.99□□□□□ -1.29
CDKL5-208ENST00000624953 ANKLE1Q8NAG6 615 aa6.98□□□□□ -1.29
CDKL5-208ENST00000624953 SYMPKQ92797 1274 aaKnown RBP6.98□□□□□ -1.29
CDKL5-208ENST00000624953 SLC6A16Q9GZN6 736 aa6.98□□□□□ -1.29
CDKL5-208ENST00000624953 CFAP99D6REC4 459 aa6.97□□□□□ -1.29
CDKL5-208ENST00000624953 JUNDP17535 347 aa6.97□□□□□ -1.29
CDKL5-208ENST00000624953 MTMR2Q13614 643 aa6.97□□□□□ -1.29
CDKL5-208ENST00000624953 PLA2G2CQ5R387 149 aa6.97□□□□□ -1.29
CDKL5-208ENST00000624953 ZNF787Q6DD87 383 aa6.97□□□□□ -1.29
CDKL5-208ENST00000624953 PROCA1Q8NCQ7 364 aaPredicted RBP6.97□□□□□ -1.29
CDKL5-208ENST00000624953 ZBTB3Q9H5J0 574 aa6.97□□□□□ -1.29
CDKL5-208ENST00000624953 CABLES1Q8TDN4 633 aa6.96□□□□□ -1.3
CDKL5-208ENST00000624953 RTL5Q5HYW3 569 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-208ENST00000624953 IL27Q8NEV9 243 aa6.95□□□□□ -1.3
CDKL5-208ENST00000624953 GGCXP38435 758 aa6.94□□□□□ -1.3
CDKL5-208ENST00000624953 PRR7Q8TB68 274 aa6.94□□□□□ -1.3
CDKL5-208ENST00000624953 POLR3EQ9NVU0 708 aa6.94□□□□□ -1.3
CDKL5-208ENST00000624953 F12P00748 615 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-208ENST00000624953 SLC19A1P41440 591 aa6.93□□□□□ -1.3
CDKL5-208ENST00000624953 PTPRNQ16849 979 aa6.93□□□□□ -1.3
CDKL5-208ENST00000624953 LYPD8Q6UX82 237 aa6.93□□□□□ -1.3
CDKL5-208ENST00000624953 LIAT1Q6ZQX7 453 aa6.93□□□□□ -1.3
CDKL5-208ENST00000624953 ZNF775Q96BV0 537 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-208ENST00000624953 POTECB2RU33 542 aa6.92□□□□□ -1.3
CDKL5-208ENST00000624953 C6orf229H3BNL8 230 aa6.92□□□□□ -1.3
CDKL5-208ENST00000624953 SOCS7O14512 581 aa6.92□□□□□ -1.3
CDKL5-208ENST00000624953 SPRYD7Q5W111 196 aa6.91□□□□□ -1.3
CDKL5-208ENST00000624953 UNC13AQ9UPW8 1703 aa6.9□□□□□ -1.3
CDKL5-208ENST00000624953 TNFRSF10AO00220 468 aa6.9□□□□□ -1.3
CDKL5-208ENST00000624953 RPIAP49247 311 aa6.9□□□□□ -1.3
CDKL5-208ENST00000624953 EVA1BQ9NVM1 165 aa6.9□□□□□ -1.3
CDKL5-208ENST00000624953 FCF1Q9Y324 198 aaKnown RBP6.9□□□□□ -1.3
CDKL5-208ENST00000624953 PER1O15534 1290 aaPredicted RBP6.89□□□□□ -1.31
CDKL5-208ENST00000624953 RFC5P40937 340 aa6.89□□□□□ -1.31
CDKL5-208ENST00000624953 MYT1Q01538 1121 aa6.89□□□□□ -1.31
CDKL5-208ENST00000624953 CCNYL3P0C7X3 344 aa6.88□□□□□ -1.31
CDKL5-208ENST00000624953 CSPP1Q1MSJ5 1256 aa6.88□□□□□ -1.31
CDKL5-208ENST00000624953 TMEM132AQ24JP5 1023 aa6.88□□□□□ -1.31
CDKL5-208ENST00000624953 ZNF697Q5TEC3 545 aa6.88□□□□□ -1.31
CDKL5-208ENST00000624953 PTCRAQ6ISU1 281 aaPredicted RBP6.88□□□□□ -1.31
CDKL5-208ENST00000624953 ZNF598Q86UK7 904 aaKnown RBP6.88□□□□□ -1.31
CDKL5-208ENST00000624953 PCMTD1Q96MG8 357 aaPredicted RBP6.88□□□□□ -1.31
CDKL5-208ENST00000624953 NUDT12Q9BQG2 462 aa6.87□□□□□ -1.31
CDKL5-208ENST00000624953 GDF9O60383 454 aa6.86□□□□□ -1.31
CDKL5-208ENST00000624953 KCNH2Q12809 1159 aa6.86□□□□□ -1.31
CDKL5-208ENST00000624953 PKDCCQ504Y2 493 aa6.86□□□□□ -1.31
CDKL5-208ENST00000624953 FAM187AA6NFU0 413 aa6.85□□□□□ -1.31
CDKL5-208ENST00000624953 ST8SIA5O15466 376 aa6.85□□□□□ -1.31
CDKL5-208ENST00000624953 GPR37L1O60883 481 aa6.85□□□□□ -1.31
CDKL5-208ENST00000624953 CTDSPL2Q05D32 466 aa6.85□□□□□ -1.31
CDKL5-208ENST00000624953 BANK1Q8NDB2 785 aa6.85□□□□□ -1.31
CDKL5-208ENST00000624953 PRR20EP86478 221 aa6.84□□□□□ -1.31
CDKL5-208ENST00000624953 PRR20CP86479 221 aa6.84□□□□□ -1.31
CDKL5-208ENST00000624953 PRR20DP86480 221 aa6.84□□□□□ -1.31
CDKL5-208ENST00000624953 PRR20BP86481 221 aa6.84□□□□□ -1.31
CDKL5-208ENST00000624953 PRR20AP86496 221 aa6.84□□□□□ -1.31
CDKL5-208ENST00000624953 TMEM259Q4ZIN3 620 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms