RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 SNRKQ9NRH2 765 aa7.74□□□□□ -1.17
ATRX-209ENST00000623242 TSR3Q9UJK0 312 aaKnown RBP7.74□□□□□ -1.17
ATRX-209ENST00000623242 PPP4CP60510 307 aa7.73□□□□□ -1.17
ATRX-209ENST00000623242 NYAP1Q6ZVC0 841 aa7.73□□□□□ -1.17
ATRX-209ENST00000623242 SYMPKQ92797 1274 aaKnown RBP7.73□□□□□ -1.17
ATRX-209ENST00000623242 WBP1LQ9NX94 342 aa7.73□□□□□ -1.17
ATRX-209ENST00000623242 ZMYND15Q9H091 742 aa7.72□□□□□ -1.17
ATRX-209ENST00000623242 ZBTB3Q9H5J0 574 aa7.72□□□□□ -1.17
ATRX-209ENST00000623242 SLC27A5Q9Y2P5 690 aa7.72□□□□□ -1.17
ATRX-209ENST00000623242 NUTM2BA6NNL0 878 aaPredicted RBP7.71□□□□□ -1.18
ATRX-209ENST00000623242 NUTM2EB1AL46 878 aaPredicted RBP7.71□□□□□ -1.18
ATRX-209ENST00000623242 GRIPAP1Q4V328 841 aa7.71□□□□□ -1.18
ATRX-209ENST00000623242 TMEM259Q4ZIN3 620 aa7.71□□□□□ -1.18
ATRX-209ENST00000623242 NUTM2DQ5VT03 806 aaPredicted RBP7.71□□□□□ -1.18
ATRX-209ENST00000623242 NUTM2AQ8IVF1 878 aaPredicted RBP7.71□□□□□ -1.18
ATRX-209ENST00000623242 BANK1Q8NDB2 785 aa7.71□□□□□ -1.18
ATRX-209ENST00000623242 NECTIN2Q92692 538 aa7.71□□□□□ -1.18
ATRX-209ENST00000623242 CFAP99D6REC4 459 aa7.7□□□□□ -1.18
ATRX-209ENST00000623242 MTMR2Q13614 643 aa7.7□□□□□ -1.18
ATRX-209ENST00000623242 CLUAP1Q96AJ1 413 aa7.7□□□□□ -1.18
ATRX-209ENST00000623242 SPDYE5A6NIY4 337 aa7.69□□□□□ -1.18
ATRX-209ENST00000623242 AP1G2O75843 785 aa7.69□□□□□ -1.18
ATRX-209ENST00000623242 BLOC1S3Q6QNY0 202 aa7.69□□□□□ -1.18
ATRX-209ENST00000623242 MTMR14Q8NCE2 650 aa7.69□□□□□ -1.18
ATRX-209ENST00000623242 POM121Q96HA1 1249 aa7.69□□□□□ -1.18
ATRX-209ENST00000623242 C6orf229H3BNL8 230 aa7.68□□□□□ -1.18
ATRX-209ENST00000623242 SUPT5HO00267 1087 aaKnown RBP7.68□□□□□ -1.18
ATRX-209ENST00000623242 ITGBL1O95965 494 aaPredicted RBP7.68□□□□□ -1.18
ATRX-209ENST00000623242 RNF19BQ6ZMZ0 732 aa7.68□□□□□ -1.18
ATRX-209ENST00000623242 PRR14Q9BWN1 585 aa7.68□□□□□ -1.18
ATRX-209ENST00000623242 RGS20O76081 388 aa7.67□□□□□ -1.18
ATRX-209ENST00000623242 USP17L8P0C7I0 530 aa7.67□□□□□ -1.18
ATRX-209ENST00000623242 CTDSPL2Q05D32 466 aa7.67□□□□□ -1.18
ATRX-209ENST00000623242 THAP11Q96EK4 314 aa7.67□□□□□ -1.18
ATRX-209ENST00000623242 PCDHB3Q9Y5E6 796 aa7.67□□□□□ -1.18
ATRX-209ENST00000623242 UBTFP17480 764 aaKnown RBP7.66□□□□□ -1.18
ATRX-209ENST00000623242 BRICD5Q6PL45 260 aa7.66□□□□□ -1.18
ATRX-209ENST00000623242 SCUBE3Q8IX30 993 aa7.66□□□□□ -1.18
ATRX-209ENST00000623242 A6NJR5 290 aa7.65□□□□□ -1.18
ATRX-209ENST00000623242 RETREG3Q86VR2 466 aa7.65□□□□□ -1.18
ATRX-209ENST00000623242 PRR7Q8TB68 274 aa7.65□□□□□ -1.18
ATRX-209ENST00000623242 HMX1Q9NP08 348 aaPredicted RBP7.65□□□□□ -1.18
ATRX-209ENST00000623242 COG6Q9Y2V7 657 aa7.65□□□□□ -1.18
ATRX-209ENST00000623242 Q3C1V9 767 aa7.64□□□□□ -1.19
ATRX-209ENST00000623242 LRRN4Q8WUT4 740 aa7.64□□□□□ -1.19
ATRX-209ENST00000623242 GJD4Q96KN9 370 aaPredicted RBP7.64□□□□□ -1.19
ATRX-209ENST00000623242 SALL2Q9Y467 1007 aaPredicted RBP7.64□□□□□ -1.19
ATRX-209ENST00000623242 A0A0G2JS52 829 aa7.63□□□□□ -1.19
ATRX-209ENST00000623242 PER1O15534 1290 aaPredicted RBP7.63□□□□□ -1.19
ATRX-209ENST00000623242 SOCS7O14512 581 aa7.62□□□□□ -1.19
ATRX-209ENST00000623242 GPR37L1O60883 481 aa7.62□□□□□ -1.19
ATRX-209ENST00000623242 NR1I2O75469 434 aa7.62□□□□□ -1.19
ATRX-209ENST00000623242 COPS2P61201 443 aa7.62□□□□□ -1.19
ATRX-209ENST00000623242 FNBP4Q8N3X1 1017 aaPredicted RBP7.62□□□□□ -1.19
ATRX-209ENST00000623242 TSC1Q92574 1164 aa7.62□□□□□ -1.19
ATRX-209ENST00000623242 TRIM34Q9BYJ4 488 aa7.62□□□□□ -1.19
ATRX-209ENST00000623242 FAM160A2Q8N612 972 aaPredicted RBP7.61□□□□□ -1.19
ATRX-209ENST00000623242 HELBQ8NG08 1087 aaPredicted RBP7.61□□□□□ -1.19
ATRX-209ENST00000623242 EPS8L1Q8TE68 723 aa7.61□□□□□ -1.19
ATRX-209ENST00000623242 USB1Q9BQ65 265 aaKnown RBP7.61□□□□□ -1.19
ATRX-209ENST00000623242 C1orf115Q9H7X2 142 aa7.61□□□□□ -1.19
ATRX-209ENST00000623242 TLL1O43897 1013 aa7.6□□□□□ -1.19
ATRX-209ENST00000623242 TRAK2O60296 914 aa7.6□□□□□ -1.19
ATRX-209ENST00000623242 FMNL1O95466 1100 aaPredicted RBP7.6□□□□□ -1.19
ATRX-209ENST00000623242 KCNC4Q03721 635 aa7.6□□□□□ -1.19
ATRX-209ENST00000623242 TJAP1Q5JTD0 557 aa7.6□□□□□ -1.19
ATRX-209ENST00000623242 MTRQ99707 1265 aa7.6□□□□□ -1.19
ATRX-209ENST00000623242 GDPD2Q9HCC8 539 aa7.6□□□□□ -1.19
ATRX-209ENST00000623242 TBC1D2BQ9UPU7 963 aa7.6□□□□□ -1.19
ATRX-209ENST00000623242 DESI1Q6ICB0 168 aa7.59□□□□□ -1.19
ATRX-209ENST00000623242 PROSER2Q86WR7 435 aaPredicted RBP7.59□□□□□ -1.19
ATRX-209ENST00000623242 ZNF516Q92618 1163 aa7.59□□□□□ -1.19
ATRX-209ENST00000623242 ZPR1O75312 459 aa7.58□□□□□ -1.2
ATRX-209ENST00000623242 LYPD8Q6UX82 237 aa7.58□□□□□ -1.2
ATRX-209ENST00000623242 PRDM9Q9NQV7 894 aa7.58□□□□□ -1.2
ATRX-209ENST00000623242 ARID3CA6NKF2 412 aa7.57□□□□□ -1.2
ATRX-209ENST00000623242 RAD21O60216 631 aa7.57□□□□□ -1.2
ATRX-209ENST00000623242 JUNDP17535 347 aa7.57□□□□□ -1.2
ATRX-209ENST00000623242 SPSB2Q99619 263 aa7.57□□□□□ -1.2
ATRX-209ENST00000623242 ABL2P42684 1182 aa7.56□□□□□ -1.2
ATRX-209ENST00000623242 IRF5Q13568 498 aa7.56□□□□□ -1.2
ATRX-209ENST00000623242 NR6A1Q15406 480 aa7.56□□□□□ -1.2
ATRX-209ENST00000623242 MSS51Q4VC12 460 aa7.56□□□□□ -1.2
ATRX-209ENST00000623242 DXOO77932 396 aaKnown RBP7.55□□□□□ -1.2
ATRX-209ENST00000623242 ADH1BP00325 375 aa7.55□□□□□ -1.2
ATRX-209ENST00000623242 F12P00748 615 aaPredicted RBP7.55□□□□□ -1.2
ATRX-209ENST00000623242 IL21Q9HBE4 155 aa7.55□□□□□ -1.2
ATRX-209ENST00000623242 NDUFB9Q9Y6M9 179 aa7.55□□□□□ -1.2
ATRX-209ENST00000623242 CCDC180Q9P1Z9 1646 aa7.54□□□□□ -1.2
ATRX-209ENST00000623242 MMP16P51512 607 aa7.54□□□□□ -1.2
ATRX-209ENST00000623242 NKX2-3Q8TAU0 364 aa7.54□□□□□ -1.2
ATRX-209ENST00000623242 ZNF777Q9ULD5 760 aaPredicted RBP7.54□□□□□ -1.2
ATRX-209ENST00000623242 APBB1O00213 710 aa7.53□□□□□ -1.2
ATRX-209ENST00000623242 PTPRNQ16849 979 aa7.53□□□□□ -1.2
ATRX-209ENST00000623242 MAP10Q9P2G4 905 aa7.53□□□□□ -1.2
ATRX-209ENST00000623242 POM121CA8CG34 1229 aa7.51□□□□□ -1.21
ATRX-209ENST00000623242 ZNF330Q9Y3S2 320 aaPredicted RBP7.51□□□□□ -1.21
ATRX-209ENST00000623242 CCNYL3P0C7X3 344 aa7.49□□□□□ -1.21
ATRX-209ENST00000623242 NUDT12Q9BQG2 462 aa7.49□□□□□ -1.21
ATRX-209ENST00000623242 SLC6A16Q9GZN6 736 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms