RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 ANP32CO43423 234 aa19.59■□□□□ 0.73
CLTCL1-212ENST00000622493 TULP4Q9NRJ4 1543 aa19.59■□□□□ 0.73
CLTCL1-212ENST00000622493 ROBO2Q9HCK4 1378 aa19.59■□□□□ 0.73
CLTCL1-212ENST00000622493 XRN1Q8IZH2 1706 aaKnown RBP19.58■□□□□ 0.72
CLTCL1-212ENST00000622493 PLEKHH1Q9ULM0 1364 aa19.57■□□□□ 0.72
CLTCL1-212ENST00000622493 MINK1Q8N4C8 1332 aaPredicted RBP19.57■□□□□ 0.72
CLTCL1-212ENST00000622493 CHD2O14647 1828 aaKnown RBP19.57■□□□□ 0.72
CLTCL1-212ENST00000622493 MYOM1P52179 1685 aa19.56■□□□□ 0.72
CLTCL1-212ENST00000622493 PANK3Q9H999 370 aa19.54■□□□□ 0.72
CLTCL1-212ENST00000622493 ATAD2Q6PL18 1390 aa19.53■□□□□ 0.72
CLTCL1-212ENST00000622493 NINLQ9Y2I6 1382 aa19.53■□□□□ 0.72
CLTCL1-212ENST00000622493 HSPA2P54652 639 aa19.53■□□□□ 0.72
CLTCL1-212ENST00000622493 SRPK2P78362 688 aaKnown RBP19.53■□□□□ 0.72
CLTCL1-212ENST00000622493 PER1O15534 1290 aaPredicted RBP19.52■□□□□ 0.72
CLTCL1-212ENST00000622493 KCNA6P17658 529 aa19.52■□□□□ 0.72
CLTCL1-212ENST00000622493 CDK19Q9BWU1 502 aa19.52■□□□□ 0.72
CLTCL1-212ENST00000622493 ADGRB2O60241 1585 aa19.52■□□□□ 0.72
CLTCL1-212ENST00000622493 WASLO00401 505 aaPredicted RBP19.51■□□□□ 0.71
CLTCL1-212ENST00000622493 CABP2Q9NPB3 220 aa19.51■□□□□ 0.71
CLTCL1-212ENST00000622493 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.49■□□□□ 0.71
CLTCL1-212ENST00000622493 PRKRIP1Q9H875 184 aaPredicted RBP19.48■□□□□ 0.71
CLTCL1-212ENST00000622493 NWD1Q149M9 1564 aa19.48■□□□□ 0.71
CLTCL1-212ENST00000622493 KTN1Q86UP2 1357 aaKnown RBP19.48■□□□□ 0.71
CLTCL1-212ENST00000622493 TMC1Q8TDI8 760 aa19.48■□□□□ 0.71
CLTCL1-212ENST00000622493 STRCQ7RTU9 1775 aa19.46■□□□□ 0.71
CLTCL1-212ENST00000622493 CCER2I3L3R5 266 aa19.46■□□□□ 0.71
CLTCL1-212ENST00000622493 SLC12A5Q9H2X9 1139 aa19.46■□□□□ 0.71
CLTCL1-212ENST00000622493 KNSTRNQ9Y448 316 aa19.46■□□□□ 0.71
CLTCL1-212ENST00000622493 ANKRD36BQ8N2N9 1353 aa19.44■□□□□ 0.7
CLTCL1-212ENST00000622493 NKTRP30414 1462 aaKnown RBP19.44■□□□□ 0.7
CLTCL1-212ENST00000622493 NPC1L1Q9UHC9 1359 aa19.43■□□□□ 0.7
CLTCL1-212ENST00000622493 RALBP1Q15311 655 aa19.42■□□□□ 0.7
CLTCL1-212ENST00000622493 TERF2IPQ9NYB0 399 aa19.42■□□□□ 0.7
CLTCL1-212ENST00000622493 NUDT16Q96DE0 195 aaKnown RBP19.41■□□□□ 0.7
CLTCL1-212ENST00000622493 CCDC61Q9Y6R9 512 aa19.41■□□□□ 0.7
CLTCL1-212ENST00000622493 CARD14Q9BXL6 1004 aa19.39■□□□□ 0.7
CLTCL1-212ENST00000622493 ATP7BP35670 1465 aa19.39■□□□□ 0.69
CLTCL1-212ENST00000622493 AMER1Q5JTC6 1135 aaPredicted RBP19.39■□□□□ 0.69
CLTCL1-212ENST00000622493 CABP1Q9NZU7 370 aa19.39■□□□□ 0.69
CLTCL1-212ENST00000622493 DMRT2Q9Y5R5 561 aa19.39■□□□□ 0.69
CLTCL1-212ENST00000622493 PARD3Q8TEW0 1356 aa19.38■□□□□ 0.69
CLTCL1-212ENST00000622493 CDC42BPGQ6DT37 1551 aa19.37■□□□□ 0.69
CLTCL1-212ENST00000622493 HDGFL2Q7Z4V5 671 aaPredicted RBP19.37■□□□□ 0.69
CLTCL1-212ENST00000622493 PPIP5K1Q6PFW1 1433 aa19.37■□□□□ 0.69
CLTCL1-212ENST00000622493 ADGRL3Q9HAR2 1447 aa19.37■□□□□ 0.69
CLTCL1-212ENST00000622493 NCOA3Q9Y6Q9 1424 aa19.37■□□□□ 0.69
CLTCL1-212ENST00000622493 A0A1W2PP64 1363 aa19.37■□□□□ 0.69
CLTCL1-212ENST00000622493 CD163L1Q9NR16 1453 aa19.37■□□□□ 0.69
CLTCL1-212ENST00000622493 PROSER2Q86WR7 435 aaPredicted RBP19.37■□□□□ 0.69
CLTCL1-212ENST00000622493 USP32Q8NFA0 1604 aa19.36■□□□□ 0.69
CLTCL1-212ENST00000622493 NALCNQ8IZF0 1738 aa19.36■□□□□ 0.69
CLTCL1-212ENST00000622493 ANKARQ7Z5J8 1434 aa19.36■□□□□ 0.69
CLTCL1-212ENST00000622493 NSD3Q9BZ95 1437 aa19.36■□□□□ 0.69
CLTCL1-212ENST00000622493 PRR36Q9H6K5 1346 aa19.35■□□□□ 0.69
CLTCL1-212ENST00000622493 CC2D1BQ5T0F9 858 aaKnown RBP19.34■□□□□ 0.69
CLTCL1-212ENST00000622493 TOPAZ1Q8N9V7 1692 aa19.34■□□□□ 0.69
CLTCL1-212ENST00000622493 CGNL1Q0VF96 1302 aa19.34■□□□□ 0.69
CLTCL1-212ENST00000622493 ZNF692Q9BU19 519 aaPredicted RBP19.34■□□□□ 0.69
CLTCL1-212ENST00000622493 FMN2Q9NZ56 1722 aa19.33■□□□□ 0.69
CLTCL1-212ENST00000622493 MYBBP1AQ9BQG0 1328 aaKnown RBP19.33■□□□□ 0.69
CLTCL1-212ENST00000622493 CPSF1Q10570 1443 aaKnown RBP19.33■□□□□ 0.69
CLTCL1-212ENST00000622493 ITSN1Q15811 1721 aa19.33■□□□□ 0.68
CLTCL1-212ENST00000622493 PLEKHG3A1L390 1219 aa19.33■□□□□ 0.68
CLTCL1-212ENST00000622493 STRCP1A6NGW2 1772 aa19.33■□□□□ 0.68
CLTCL1-212ENST00000622493 CNGB1Q14028 1251 aaPredicted RBP19.32■□□□□ 0.68
CLTCL1-212ENST00000622493 NSD2O96028 1365 aa19.32■□□□□ 0.68
CLTCL1-212ENST00000622493 C14orf37Q86TY3 774 aa19.31■□□□□ 0.68
CLTCL1-212ENST00000622493 C19orf44Q9H6X5 657 aa19.3■□□□□ 0.68
CLTCL1-212ENST00000622493 RBM33Q96EV2 1170 aaKnown RBP19.29■□□□□ 0.68
CLTCL1-212ENST00000622493 TMEM94Q12767 1356 aa19.29■□□□□ 0.68
CLTCL1-212ENST00000622493 NUTM2FA1L443 756 aa19.28■□□□□ 0.68
CLTCL1-212ENST00000622493 AKAP12Q02952 1782 aa19.28■□□□□ 0.68
CLTCL1-212ENST00000622493 SCAF1Q9H7N4 1312 aaKnown RBP19.28■□□□□ 0.68
CLTCL1-212ENST00000622493 EDC4Q6P2E9 1401 aaKnown RBP19.28■□□□□ 0.68
CLTCL1-212ENST00000622493 NLRP13Q86W25 1043 aa19.28■□□□□ 0.68
CLTCL1-212ENST00000622493 DCCP43146 1447 aa19.27■□□□□ 0.68
CLTCL1-212ENST00000622493 MON2Q7Z3U7 1717 aa19.27■□□□□ 0.68
CLTCL1-212ENST00000622493 BRD4O60885 1362 aaPredicted RBP19.27■□□□□ 0.67
CLTCL1-212ENST00000622493 RGPD8O14715 1765 aaPredicted RBP19.26■□□□□ 0.67
CLTCL1-212ENST00000622493 MRS2Q9HD23 443 aa19.26■□□□□ 0.67
CLTCL1-212ENST00000622493 ACEP12821 1306 aa19.26■□□□□ 0.67
CLTCL1-212ENST00000622493 POLR3AO14802 1390 aaPredicted RBP19.26■□□□□ 0.67
CLTCL1-212ENST00000622493 ZNF335Q9H4Z2 1342 aaPredicted RBP19.24■□□□□ 0.67
CLTCL1-212ENST00000622493 FYB1O15117 783 aa19.23■□□□□ 0.67
CLTCL1-212ENST00000622493 MORC1Q86VD1 984 aa19.23■□□□□ 0.67
CLTCL1-212ENST00000622493 CCDC184Q52MB2 194 aa19.22■□□□□ 0.67
CLTCL1-212ENST00000622493 LRRC7Q96NW7 1537 aa19.22■□□□□ 0.67
CLTCL1-212ENST00000622493 USP6P35125 1406 aa19.22■□□□□ 0.67
CLTCL1-212ENST00000622493 MSH6P52701 1360 aa19.22■□□□□ 0.67
CLTCL1-212ENST00000622493 PPP2R1AP30153 589 aa19.22■□□□□ 0.67
CLTCL1-212ENST00000622493 NGDNQ8NEJ9 315 aaKnown RBP19.22■□□□□ 0.67
CLTCL1-212ENST00000622493 ANKRD26Q9UPS8 1709 aa19.21■□□□□ 0.67
CLTCL1-212ENST00000622493 ATF3P18847 181 aa19.21■□□□□ 0.67
CLTCL1-212ENST00000622493 CADPS2Q86UW7 1296 aa19.21■□□□□ 0.67
CLTCL1-212ENST00000622493 PMFBP1Q8TBY8 1022 aa19.21■□□□□ 0.67
CLTCL1-212ENST00000622493 KIF20BQ96Q89 1820 aa19.21■□□□□ 0.67
CLTCL1-212ENST00000622493 PHF8Q9UPP1 1060 aa19.2■□□□□ 0.66
CLTCL1-212ENST00000622493 NRKQ7Z2Y5 1582 aa19.19■□□□□ 0.66
CLTCL1-212ENST00000622493 XIRP1Q702N8 1843 aaKnown RBP19.19■□□□□ 0.66
CLTCL1-212ENST00000622493 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms