RNA–Protein interactions for RNA: ENST00000622383.1

NKX2-3-202, Transcript of NK2 homeobox 3, humanhuman

TSL 5 BASIC

Gene NKX2-3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-202ENST00000622383 STK26Q9P289 416 aa30.12■■■□□ 2.41
NKX2-3-202ENST00000622383 ANKRD36BQ8N2N9 1353 aa30.12■■■□□ 2.41
NKX2-3-202ENST00000622383 APAF1O14727 1248 aa30.11■■■□□ 2.41
NKX2-3-202ENST00000622383 PLIN1O60240 522 aa30.11■■■□□ 2.41
NKX2-3-202ENST00000622383 SAFB2Q14151 953 aaKnown RBP eCLIP30.1■■■□□ 2.41
NKX2-3-202ENST00000622383 CABP2Q9NPB3 220 aa30.1■■■□□ 2.41
NKX2-3-202ENST00000622383 PTPRMP28827 1452 aa30.1■■■□□ 2.41
NKX2-3-202ENST00000622383 CGNL1Q0VF96 1302 aa30.1■■■□□ 2.41
NKX2-3-202ENST00000622383 FANCIQ9NVI1 1328 aa30.09■■■□□ 2.41
NKX2-3-202ENST00000622383 SLFN5Q08AF3 891 aa30.08■■■□□ 2.41
NKX2-3-202ENST00000622383 TRMT2AQ8IZ69 625 aaKnown RBP30.08■■■□□ 2.41
NKX2-3-202ENST00000622383 YTHDC2Q9H6S0 1430 aaKnown RBP30.07■■■□□ 2.4
NKX2-3-202ENST00000622383 CLTCQ00610 1675 aaKnown RBP30.06■■■□□ 2.4
NKX2-3-202ENST00000622383 TNNT2P45379 298 aaPredicted RBP30.06■■■□□ 2.4
NKX2-3-202ENST00000622383 ALKQ9UM73 1620 aa30.04■■■□□ 2.4
NKX2-3-202ENST00000622383 SPATA31D1Q6ZQQ2 1576 aa30.04■■■□□ 2.4
NKX2-3-202ENST00000622383 PRAM1Q96QH2 718 aa30.03■■■□□ 2.4
NKX2-3-202ENST00000622383 STAG3Q9UJ98 1225 aa30.03■■■□□ 2.4
NKX2-3-202ENST00000622383 SHPRHQ149N8 1683 aa30.02■■■□□ 2.4
NKX2-3-202ENST00000622383 NSD2O96028 1365 aa30.02■■■□□ 2.4
NKX2-3-202ENST00000622383 SPINK5Q9NQ38 1064 aaPredicted RBP30.02■■■□□ 2.4
NKX2-3-202ENST00000622383 A2ML1A8K2U0 1454 aa30.02■■■□□ 2.4
NKX2-3-202ENST00000622383 NINLQ9Y2I6 1382 aa30.01■■■□□ 2.4
NKX2-3-202ENST00000622383 NGEFQ8N5V2 710 aa30.01■■■□□ 2.4
NKX2-3-202ENST00000622383 ARHGEF40Q8TER5 1519 aa29.99■■■□□ 2.39
NKX2-3-202ENST00000622383 CRBNQ96SW2 442 aa29.99■■■□□ 2.39
NKX2-3-202ENST00000622383 MTHFSP49914 203 aa29.99■■■□□ 2.39
NKX2-3-202ENST00000622383 SRPK2P78362 688 aaKnown RBP29.99■■■□□ 2.39
NKX2-3-202ENST00000622383 MLECQ14165 292 aa29.99■■■□□ 2.39
NKX2-3-202ENST00000622383 A0A1W2PP64 1363 aa29.98■■■□□ 2.39
NKX2-3-202ENST00000622383 MINK1Q8N4C8 1332 aaPredicted RBP29.98■■■□□ 2.39
NKX2-3-202ENST00000622383 MSH5O43196 834 aa29.97■■■□□ 2.39
NKX2-3-202ENST00000622383 C20orf194Q5TEA3 1177 aa29.97■■■□□ 2.39
NKX2-3-202ENST00000622383 POGKQ9P215 609 aa29.97■■■□□ 2.39
NKX2-3-202ENST00000622383 ATAD2Q6PL18 1390 aa29.95■■■□□ 2.39
NKX2-3-202ENST00000622383 ABCC11Q96J66 1382 aa29.95■■■□□ 2.39
NKX2-3-202ENST00000622383 DMRT2Q9Y5R5 561 aa29.95■■■□□ 2.39
NKX2-3-202ENST00000622383 E9PSI1 815 aa29.94■■■□□ 2.38
NKX2-3-202ENST00000622383 RIMS2Q9UQ26 1411 aa29.93■■■□□ 2.38
NKX2-3-202ENST00000622383 NKTRP30414 1462 aaKnown RBP29.93■■■□□ 2.38
NKX2-3-202ENST00000622383 ANP32EQ9BTT0 268 aa29.92■■■□□ 2.38
NKX2-3-202ENST00000622383 CD163L1Q9NR16 1453 aa29.91■■■□□ 2.38
NKX2-3-202ENST00000622383 RUNDC1Q96C34 613 aa29.91■■■□□ 2.38
NKX2-3-202ENST00000622383 WWC1Q8IX03 1113 aa29.9■■■□□ 2.38
NKX2-3-202ENST00000622383 CFAP53Q96M91 514 aa29.9■■■□□ 2.38
NKX2-3-202ENST00000622383 IQSEC2Q5JU85 1478 aa29.89■■■□□ 2.38
NKX2-3-202ENST00000622383 DNAJC5Q9H3Z4 198 aa29.88■■■□□ 2.37
NKX2-3-202ENST00000622383 CDK19Q9BWU1 502 aa29.87■■■□□ 2.37
NKX2-3-202ENST00000622383 TERF2IPQ9NYB0 399 aa29.87■■■□□ 2.37
NKX2-3-202ENST00000622383 DLC1Q96QB1 1528 aa29.86■■■□□ 2.37
NKX2-3-202ENST00000622383 ZMYM3Q14202 1370 aa29.86■■■□□ 2.37
NKX2-3-202ENST00000622383 SETD1AO15047 1707 aaKnown RBP29.85■■■□□ 2.37
NKX2-3-202ENST00000622383 TCP11L2Q8N4U5 519 aa29.84■■■□□ 2.37
NKX2-3-202ENST00000622383 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.84■■■□□ 2.37
NKX2-3-202ENST00000622383 PHF23Q9BUL5 403 aaPredicted RBP29.84■■■□□ 2.37
NKX2-3-202ENST00000622383 NLRP1Q9C000 1473 aa29.84■■■□□ 2.37
NKX2-3-202ENST00000622383 GGNBP2Q9H3C7 697 aa29.83■■■□□ 2.37
NKX2-3-202ENST00000622383 FYB1O15117 783 aa29.83■■■□□ 2.37
NKX2-3-202ENST00000622383 MYT1Q01538 1121 aa29.83■■■□□ 2.37
NKX2-3-202ENST00000622383 RRP7AQ9Y3A4 280 aaKnown RBP29.81■■■□□ 2.36
NKX2-3-202ENST00000622383 MED14O60244 1454 aa29.81■■■□□ 2.36
NKX2-3-202ENST00000622383 WAPLQ7Z5K2 1190 aa29.81■■■□□ 2.36
NKX2-3-202ENST00000622383 TCERG1O14776 1098 aaKnown RBP29.79■■■□□ 2.36
NKX2-3-202ENST00000622383 CABP1Q9NZU7 370 aa29.79■■■□□ 2.36
NKX2-3-202ENST00000622383 BCAR3O75815 825 aa29.79■■■□□ 2.36
NKX2-3-202ENST00000622383 NEUROD2Q15784 382 aa29.79■■■□□ 2.36
NKX2-3-202ENST00000622383 ESF1Q9H501 851 aaKnown RBP29.79■■■□□ 2.36
NKX2-3-202ENST00000622383 NRXN3Q9Y4C0 1643 aa29.78■■■□□ 2.36
NKX2-3-202ENST00000622383 HDGFL2Q7Z4V5 671 aaPredicted RBP29.77■■■□□ 2.36
NKX2-3-202ENST00000622383 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.77■■■□□ 2.36
NKX2-3-202ENST00000622383 CCDC27Q2M243 656 aa29.76■■■□□ 2.35
NKX2-3-202ENST00000622383 U2AF1L5P0DN76 240 aaPredicted RBP29.75■■■□□ 2.35
NKX2-3-202ENST00000622383 U2AF1Q01081 240 aaKnown RBP eCLIP29.75■■■□□ 2.35
NKX2-3-202ENST00000622383 COL3A1P02461 1466 aaPredicted RBP29.75■■■□□ 2.35
NKX2-3-202ENST00000622383 NCBP3Q53F19 620 aaKnown RBP29.75■■■□□ 2.35
NKX2-3-202ENST00000622383 KDM2BQ8NHM5 1336 aa29.74■■■□□ 2.35
NKX2-3-202ENST00000622383 WDR63Q8IWG1 891 aa29.74■■■□□ 2.35
NKX2-3-202ENST00000622383 METP08581 1390 aa29.74■■■□□ 2.35
NKX2-3-202ENST00000622383 ANKRD26Q9UPS8 1709 aa29.74■■■□□ 2.35
NKX2-3-202ENST00000622383 TRHP20396 242 aaPredicted RBP29.73■■■□□ 2.35
NKX2-3-202ENST00000622383 TNRQ92752 1358 aa29.71■■■□□ 2.35
NKX2-3-202ENST00000622383 ADGRB2O60241 1585 aa29.7■■■□□ 2.34
NKX2-3-202ENST00000622383 MS4A1P11836 297 aa29.7■■■□□ 2.34
NKX2-3-202ENST00000622383 ATP7BP35670 1465 aa29.68■■■□□ 2.34
NKX2-3-202ENST00000622383 PLEKHF1Q96S99 279 aa29.68■■■□□ 2.34
NKX2-3-202ENST00000622383 PNPLA6Q8IY17 1366 aa29.66■■■□□ 2.34
NKX2-3-202ENST00000622383 CENPQQ7L2Z9 268 aaPredicted RBP29.65■■■□□ 2.34
NKX2-3-202ENST00000622383 WASLO00401 505 aaPredicted RBP29.64■■■□□ 2.34
NKX2-3-202ENST00000622383 HDGFP51858 240 aaKnown RBP29.64■■■□□ 2.34
NKX2-3-202ENST00000622383 SKAP1Q86WV1 359 aa29.64■■■□□ 2.34
NKX2-3-202ENST00000622383 U2SURPO15042 1029 aaKnown RBP29.64■■■□□ 2.34
NKX2-3-202ENST00000622383 TXNDC2Q86VQ3 553 aa29.64■■■□□ 2.34
NKX2-3-202ENST00000622383 TECPR2O15040 1411 aa29.63■■■□□ 2.33
NKX2-3-202ENST00000622383 PDE4AP27815 886 aa29.63■■■□□ 2.33
NKX2-3-202ENST00000622383 TMEM2Q9UHN6 1383 aa29.63■■■□□ 2.33
NKX2-3-202ENST00000622383 PDE3AQ14432 1141 aa29.63■■■□□ 2.33
NKX2-3-202ENST00000622383 SIRT1Q96EB6 747 aa29.63■■■□□ 2.33
NKX2-3-202ENST00000622383 KIF20BQ96Q89 1820 aa29.62■■■□□ 2.33
NKX2-3-202ENST00000622383 FAM135BQ49AJ0 1406 aa29.61■■■□□ 2.33
NKX2-3-202ENST00000622383 RARSP54136 660 aaKnown RBP29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms